HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:12.5 nTPM
HPA Brain:24.3 nTPM
GTEx:12.5 nTPM
FANTOM5:31.9 Scaled Tags Per Million
Pig:55.9 nTPM
Mouse:17.0 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 24.3
Sample id Sample description nTPM
Hippocampus
nTPM: 20.5
1911 Female, age 85, right hemisphere 24.8
2529 Female, age 94, left hemisphere 22.7
1898 Male, age 80, left hemisphere 21.3
1855 Male, age 76, left hemisphere 20.8
2621 Female, age 67, right hemisphere 18.0
2148 Female, age 91, left hemisphere 15.2
Dentate gyrus
nTPM: 20.0
2530 Female, age 94, left hemisphere 31.7
2010 Male, age 76, both hemispheres 21.3
2528 Male, age 74, both hemispheres 21.2
2246 Female, age 85, both hemispheres 17.5
2531 Female, age 67, both hemispheres 14.4
1927 Female, age 91, both hemispheres 14.1
Entorhinal gyrus
nTPM: 18.1
2117 Female, age 91, right hemisphere 28.7
1938 Female, age 85, left hemisphere 18.8
2764 Male, age 80, right hemisphere 16.5
1787 Male, age 76, left hemisphere 15.4
2686 Male, age 75, right hemisphere 15.3
2613 Female, age 94, left hemisphere 13.8
Hippocampus, CA1
nTPM: 16.9
1873 Female, age 85, both hemispheres 20.6
2527 Male, age 74, both hemispheres 19.4
2082 Female, age 91, right hemisphere 17.7
2749 Male, age 80, left hemisphere 14.4
2045 Male, age 76, both hemispheres 12.5
Hippocampus, CA2
nTPM: 20.7
2249 Male, age 74, both hemispheres 26.4
1963 Male, age 80, left hemisphere 22.1
1940 Female, age 85, left hemisphere 20.7
2437 Female, age 94, left hemisphere 20.4
2113 Female, age 91, right hemisphere 20.2
1892 Male, age 76, both hemispheres 14.2
Hippocampus, CA3
nTPM: 17.2
1891 Female, age 85, both hemispheres 27.1
2436 Male, age 74, both hemispheres 21.6
1867 Male, age 76, both hemispheres 19.0
2137 Male, age 80, left hemisphere 12.8
2861 Female, age 67, both hemispheres 11.7
2620 Female, age 94, left hemisphere 11.2
Parahippocampal cortex
nTPM: 17.0
2692 Male, age 74, both hemispheres 22.0
2532 Female, age 72, left hemisphere 19.9
2018 Male, age 76, both hemispheres 19.2
1990 Female, age 91, right hemisphere 18.7
1933 Female, age 85, both hemispheres 17.2
1850 Male, age 80, both hemispheres 17.1
2245 Female, age 91, both hemispheres 16.7
2250 Female, age 67, right hemisphere 15.3
2693 Female, age 94, both hemispheres 15.3
2622 Female, age 67, right hemisphere 8.8
Perirhinal gyrus
nTPM: 13.1
2521 Female, age 94, right hemisphere 15.1
2848 Male, age 76, right hemisphere 14.2
1841 Female, age 85, right hemisphere 13.2
1794 Male, age 80, right hemisphere 12.1
1847 Female, age 91, left hemisphere 10.8
Subiculum
nTPM: 24.3
2042 Male, age 76, both hemispheres 34.4
1901 Male, age 80, both hemispheres 30.4
1977 Female, age 85, both hemispheres 23.1
2729 Female, age 91, right hemisphere 20.6
2438 Female, age 94, left hemisphere 20.5
2619 Male, age 74, both hemispheres 16.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 12.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.5
Samples: 197

Max nTPM: 41.2
Min nTPM: 2.8
Std nTPM: 6.9
Median nTPM: 10.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 41.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 33.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 33.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 33.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 30.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 30.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 30.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 29.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 27.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 27.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 26.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 31.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.9
FF:10153-102I9 76 years, female 37.8
FF:10169-103B7 60 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 55.9
Pig sample Sample description nTPM
Subiculum
nTPM: 37.9
Samples: 4

Max nTPM: 42.5
Min nTPM: 34.5
Sample A Female 34.5
Sample B Female 39.5
Sample C Male 35.1
Sample D Male 42.5
Dorsal hippocampus
nTPM: 55.9
Samples: 4

Max nTPM: 76.5
Min nTPM: 31.5
Sample A Female 69.1
Sample B Female 46.4
Sample C Male 76.5
Sample D Male 31.5
Entorhinal cortex
nTPM: 32.8
Samples: 4

Max nTPM: 38.3
Min nTPM: 29.5
Sample A Female 29.5
Sample B Female 38.3
Sample C Male 30.7
Sample D Male 32.6
Ventral hippocampus
nTPM: 41.5
Samples: 4

Max nTPM: 48.2
Min nTPM: 33.3
Sample A Female 46.8
Sample B Female 37.6
Sample C Male 33.3
Sample D Male 48.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 17.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.3
Samples: 4

Max nTPM: 16.8
Min nTPM: 12.5
Sample A Male 16.8
Sample B Male 13.9
Sample C Female 13.9
Sample D Female 12.5
Hippocampal formation
nTPM: 17.0
Samples: 4

Max nTPM: 21.1
Min nTPM: 14.5
Sample A Male 14.5
Sample B Male 15.9
Sample C Female 21.1
Sample D Female 16.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
633686 Antisense, RP_040907_02_B06, Mouse strain C57BL/6J (56 days, male) 0.6

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