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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
48.0
nTPM
HPA Brain:
37.8
nTPM
GTEx:
48.0
nTPM
FANTOM5:
35.8
Scaled Tags Per Million
Pig:
17.6
nTPM
Mouse:
68.1
nTPM
Allen mouse:
6.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
37.8
Sample id
Sample description
nTPM
Amygdala nTPM: 37.8
2814
Male, age 76, right hemisphere
42.8
1987
Female, age 91, left hemisphere
40.8
2514
Male, age 75, right hemisphere
36.1
2517
Female, age 94, left hemisphere
34.8
2695
Female, age 67, right hemisphere
34.4
Basal amygdala nTPM: 30.7
2609
Male, age 75, right hemisphere
36.0
2243
Female, age 91, right hemisphere
33.1
1955
Male, age 76, both hemispheres
32.7
2110
Male, age 80, left hemisphere
31.5
2685
Female, age 94, left hemisphere
31.5
2827
Female, age 67, right hemisphere
19.2
Central amygdala nTPM: 33.6
1905
Male, age 76, both hemispheres
40.9
2826
Female, age 94, left hemisphere
37.2
2515
Male, age 75, right hemisphere
33.6
2239
Male, age 80, left hemisphere
29.9
2701
Female, age 91, right hemisphere
26.6
Corticomedial amygdala nTPM: 31.9
2829
Male, age 80, left hemisphere
40.0
2428
Male, age 75, right hemisphere
37.2
2242
Female, age 91, right hemisphere
34.5
2429
Female, age 94, left hemisphere
31.1
2240
Male, age 76, both hemispheres
28.9
2535
Female, age 67, right hemisphere
20.0
Lateral amygdala nTPM: 30.8
1883
Male, age 76, both hemispheres
40.3
2534
Female, age 94, left hemisphere
34.3
2516
Male, age 75, right hemisphere
34.1
2255
Female, age 91, right hemisphere
26.9
2256
Male, age 80, left hemisphere
26.6
2830
Female, age 67, right hemisphere
22.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
48.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 48.0
Samples: 152
Max nTPM: 115.2
Min nTPM: 26.8
Std nTPM: 13.0
Median nTPM: 45.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
115.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
107.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
87.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
85.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
85.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
74.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
71.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
67.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
66.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
66.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
65.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
65.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
64.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
63.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
62.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
60.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
60.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
59.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
58.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
58.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
57.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
57.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
57.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
56.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
55.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
55.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
55.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
55.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
55.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
55.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
54.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
54.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
54.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
54.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
54.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
54.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
53.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
53.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
53.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
53.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
53.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
53.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
52.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
52.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
52.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
52.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
51.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
51.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
51.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
51.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
51.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
50.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
50.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
50.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
49.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
49.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
49.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
48.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
48.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
48.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
48.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
48.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
48.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
48.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
48.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
48.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
48.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
48.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
47.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
47.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
47.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
47.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
46.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
45.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
45.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
45.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
45.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
45.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
45.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
45.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
45.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
45.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
45.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
44.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
44.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
44.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
44.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
43.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
43.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
43.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
43.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
43.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
43.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
42.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
42.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
42.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
42.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
42.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
42.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
42.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
42.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
42.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
42.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
41.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
41.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
41.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
40.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
40.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
39.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
39.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
39.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
39.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
39.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
39.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
39.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
39.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
39.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
39.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
38.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
38.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
38.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
38.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
38.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
37.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
37.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
37.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
37.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
37.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
37.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
36.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
36.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
36.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
36.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
35.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
35.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
34.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
34.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
34.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
34.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
34.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
33.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
33.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
33.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
33.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
32.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
31.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
31.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
30.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
30.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
30.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
29.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
26.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
68.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 68.1
Samples: 4
Max nTPM: 70.9
Min nTPM: 66.2
Sample A
Male
70.9
Sample B
Male
68.3
Sample C
Female
67.0
Sample D
Female
66.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
