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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DYNLT3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
289.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
227.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
226.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
150.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
112.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
94.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
84.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
68.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
67.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
64.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
61.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
58.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
58.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
47.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
41.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
40.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
39.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
39.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
38.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
35.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
35.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
33.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
31.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
29.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
29.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
27.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
27.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
26.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
26.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
25.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
25.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
24.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
24.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
23.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
23.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
23.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
20.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
18.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
17.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
14.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
14.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
13.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
13.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
12.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
12.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
11.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
11.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
11.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
10.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
7.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
6.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
4.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
3.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
3.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
3.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
3.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
3.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
2.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DYNLT3 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
164.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
128.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
102.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
102.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
77.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
73.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
68.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
68.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
66.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
59.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
58.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
58.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
55.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
51.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
51.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
50.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
50.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
49.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
49.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
48.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
47.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
46.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
46.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
45.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
45.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
44.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
44.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
44.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
43.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
43.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
43.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
43.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
43.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
42.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
41.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
41.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
41.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
40.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
39.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
39.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
39.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
39.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
38.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
38.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
38.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
38.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
38.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
37.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
37.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
37.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
37.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
37.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
37.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
37.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
37.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
36.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
36.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
36.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
36.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
36.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
36.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
36.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
36.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
35.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
35.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
35.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
35.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
35.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
34.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
34.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
34.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
34.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
34.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
34.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
33.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
33.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
33.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
33.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
33.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
33.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
33.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
33.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
32.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
32.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
32.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
32.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
32.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
32.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
32.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
32.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
31.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
31.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
31.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
31.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
31.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
31.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
31.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
31.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
31.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
31.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
31.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
31.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
31.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
31.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
31.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
31.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
31.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
31.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
31.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
30.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
30.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
30.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
30.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
30.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
30.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
30.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
30.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
30.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
30.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
30.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
29.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
29.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
29.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
29.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
29.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
29.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
29.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
29.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
29.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
29.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
29.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
29.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
28.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
28.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
28.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
28.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
28.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
28.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
28.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
28.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
28.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
28.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
28.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
28.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
28.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
28.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
28.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
28.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
28.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
28.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
28.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
28.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
28.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
28.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
27.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
27.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
27.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
27.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
27.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
27.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
27.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
27.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
27.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
27.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
27.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
27.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
26.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
26.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
26.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
26.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
26.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
26.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
26.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
26.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
26.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
26.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
26.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
26.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
26.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
26.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
26.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
26.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
26.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
26.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
26.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
26.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
26.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
26.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
25.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
25.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
25.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
25.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
25.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
25.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
25.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
25.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
25.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
25.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
25.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
25.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
25.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
25.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
25.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
25.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
25.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
24.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
24.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
24.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
24.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
24.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
24.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
24.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
24.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
24.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
24.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
24.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
24.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
24.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
24.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
24.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
24.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
24.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
24.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
24.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
24.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
24.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
24.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
24.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
24.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
24.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
24.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
24.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
24.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
24.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
24.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
24.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
24.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
23.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
23.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
23.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
23.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
23.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
23.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
23.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
23.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
23.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
23.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
23.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
23.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
23.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
23.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
23.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
23.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
23.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
23.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
23.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
23.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
23.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
23.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
23.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
23.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
23.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
23.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
23.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
23.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
23.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
22.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
22.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
22.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
22.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
22.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
22.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
22.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
22.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
22.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
22.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
22.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
22.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
22.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
22.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
22.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
22.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
22.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
22.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
22.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
22.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
22.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
22.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
22.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
22.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
21.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
21.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
21.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
21.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
21.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
21.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
21.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
21.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
21.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
21.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
21.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
21.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
21.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
21.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
21.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
21.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
21.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
21.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
21.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
21.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
21.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
20.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
20.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
20.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
20.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
20.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
20.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
20.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
20.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
20.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
20.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
20.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
20.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
20.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
20.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
20.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
20.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
20.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
20.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
20.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
20.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
19.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
19.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
19.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
19.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
19.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
19.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
19.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
19.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
19.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
19.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
19.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
19.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
19.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
19.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
19.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
19.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
19.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
19.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
18.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
18.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
18.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
18.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
18.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
18.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
18.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
18.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
18.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
18.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
18.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
18.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
18.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
18.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
18.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
18.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
18.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
18.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
18.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
18.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
18.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
18.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
18.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
17.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
17.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
17.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
17.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
17.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
17.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
17.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
17.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
17.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
17.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
17.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
17.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
17.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
17.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
17.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
17.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
17.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
17.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
17.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
17.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
17.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
16.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
16.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
16.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
16.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
16.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
16.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
16.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
16.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
16.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
16.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
16.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
16.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
15.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
15.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
15.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
15.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
15.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
15.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
15.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
15.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
15.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
15.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
15.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
15.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
15.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
14.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
14.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
14.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
14.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
14.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
14.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
14.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
14.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
14.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
14.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
13.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
13.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
13.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
13.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
13.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
13.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
13.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
13.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
13.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
13.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
13.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
13.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
12.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
12.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
12.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
12.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
12.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
12.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
12.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
12.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
11.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
11.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
11.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
11.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
11.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
11.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
11.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
11.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
10.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
10.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
10.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
10.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
9.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
7.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
7.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
5.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DYNLT3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
62.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
50.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
49.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
45.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
45.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
43.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
43.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
42.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
41.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
41.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
40.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
40.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
40.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
39.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
39.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
39.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
39.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
39.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
38.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
37.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
37.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
37.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
36.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
36.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
36.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
35.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
35.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
34.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
34.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
34.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
33.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
33.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
33.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
32.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
31.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
31.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
31.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
30.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
30.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
30.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
29.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
29.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
28.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
28.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
28.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
28.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
26.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
26.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
26.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
26.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
26.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
25.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
25.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
25.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
25.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
25.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
24.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
24.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
24.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
24.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
24.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
24.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
24.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
23.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
23.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
23.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
23.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
23.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
22.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
22.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
22.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
22.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
22.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
21.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
19.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
19.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
19.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
19.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
19.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
19.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
18.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
18.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
18.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
17.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
17.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
17.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
15.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
15.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
14.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
14.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
12.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
12.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
12.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DYNLT3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
152.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
121.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
73.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
66.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
44.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
40.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
37.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
36.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
35.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
34.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
33.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
33.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
32.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
31.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
31.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
30.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
29.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
28.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
28.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
28.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
27.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
25.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
24.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
24.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
24.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
24.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
24.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
23.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
23.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
22.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
22.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
22.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
22.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
22.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
22.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
22.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
22.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
22.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
21.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
21.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
21.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
21.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
20.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
20.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
20.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
20.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
20.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
20.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
20.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
19.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
19.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
19.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
19.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
18.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
18.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
18.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
18.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
18.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
18.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
17.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
17.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
17.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
17.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
17.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
17.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
17.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
17.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
17.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
17.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
17.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
17.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
17.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
16.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
16.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
16.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
16.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
16.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
16.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
16.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
16.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
16.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
16.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
16.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
16.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
15.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
15.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
15.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
15.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
15.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
15.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
15.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
15.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
15.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
15.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
15.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
15.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
15.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
15.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
15.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
14.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
14.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
14.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
14.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
14.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
14.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
14.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
14.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
14.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
14.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
13.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
13.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
13.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
13.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
13.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
13.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
13.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
13.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
13.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
13.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
13.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
13.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
13.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
13.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
13.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
12.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
12.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
12.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
12.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
12.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
12.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
12.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
12.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
12.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
12.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
12.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
12.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
11.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
11.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
11.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
11.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
11.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
11.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
11.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
11.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
11.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
11.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
11.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
11.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
11.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
11.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
11.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
11.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
11.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
11.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
11.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
11.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
11.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
10.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
10.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
10.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
10.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
10.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
10.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
10.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
10.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
10.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
10.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
10.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
10.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
10.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
10.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
10.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
10.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
10.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
10.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
10.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
9.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
9.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
9.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
9.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
9.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
9.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
9.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
9.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
9.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
9.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
9.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
9.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
9.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
9.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
9.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
9.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
9.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
9.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
9.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
9.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
9.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
8.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
8.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
8.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
8.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
8.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
8.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
8.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
8.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
8.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
7.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
7.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
7.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
7.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
7.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
7.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
7.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
6.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
6.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
6.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
6.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
6.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
6.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
5.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
5.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
5.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
4.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
4.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
4.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
4.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
3.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
2.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
2.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
2.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
1.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078660003
Tumor
1.0
CPT0012550003
Tumor
0.9
CPT0084560003
Tumor
0.8
CPT0011240003
Tumor
0.7
CPT0079270003
Tumor
0.6
CPT0086870003
Tumor
0.6
CPT0002270011
Tumor
0.6
CPT0078830003
Tumor
0.6
CPT0081990003
Tumor
0.6
CPT0007870001
Normal
0.5
CPT0000660001
Normal
0.5
CPT0010120001
Normal
0.5
CPT0078940001
Normal
0.5
CPT0077140001
Normal
0.5
CPT0002370001
Normal
0.5
CPT0006440003
Tumor
0.5
CPT0077500001
Normal
0.5
CPT0001340003
Tumor
0.5
CPT0018250001
Normal
0.5
CPT0020130001
Normal
0.4
CPT0001270001
Normal
0.4
CPT0012640003
Normal
0.4
CPT0086970003
Normal
0.4
CPT0002350011
Tumor
0.4
CPT0000640003
Tumor
0.4
CPT0025060001
Normal
0.4
CPT0024680001
Normal
0.4
CPT0012290003
Normal
0.4
CPT0079510001
Normal
0.4
CPT0069010001
Normal
0.4
CPT0076330003
Tumor
0.4
CPT0007470001
Normal
0.4
CPT0088920001
Normal
0.3
CPT0078840001
Normal
0.3
CPT0088640003
Normal
0.3
CPT0012570003
Normal
0.3
CPT0012770003
Normal
0.3
CPT0088710001
Normal
0.3
CPT0088550004
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0086950003
Tumor
0.3
CPT0079300001
Normal
0.3
CPT0065870003
Tumor
0.3
CPT0075570001
Normal
0.3
CPT0081600003
Tumor
0.3
CPT0012090003
Normal
0.3
CPT0076350001
Normal
0.3
CPT0014370004
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0015910003
Tumor
0.3
CPT0092800003
Normal
0.3
CPT0088970003
Tumor
0.3
CPT0088570001
Normal
0.3
CPT0014130001
Normal
0.3
CPT0088630003
Tumor
0.3
CPT0064400001
Normal
0.3
CPT0023350003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0001550001
Normal
0.3
CPT0063640001
Normal
0.2
CPT0014470001
Normal
0.2
CPT0075170001
Normal
0.2
CPT0077320001
Normal
0.2
CPT0086370003
Normal
0.2
CPT0010170001
Normal
0.2
CPT0065450001
Normal
0.2
CPT0001260009
Tumor
0.2
CPT0087050003
Normal
0.2
CPT0013790003
Normal
0.2
CPT0023710001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0066430001
Normal
0.2
CPT0024670003
Tumor
0.2
CPT0088780001
Normal
0.2
CPT0025880003
Tumor
0.2
CPT0078670001
Normal
0.2
CPT0078530001
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0063330001
Normal
0.2
CPT0025610001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0026410003
Tumor
0.2
CPT0079000001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0081620001
Normal
0.2
CPT0007320003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0009020003
Normal
0.2
CPT0026420001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0079430001
Normal
0.2
CPT0012920003
Normal
0.1
CPT0000890001
Normal
0.1
CPT0012080003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0086830003
Normal
0.1
CPT0001510001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0079230003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0065820001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0014450004
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0088500001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0017450001
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0086820003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0079410003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0017410003
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0063630003
Tumor
-0.3
CPT0007860003
Tumor
-0.3
CPT0001220008
Tumor
-0.3
CPT0025230003
Tumor
-0.3
CPT0075130003
Tumor
-0.3
CPT0001540009
Tumor
-0.3
CPT0088760003
Tumor
-0.3
CPT0010110003
Tumor
-0.3
CPT0078800003
Tumor
-0.3
CPT0014160003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0025050003
Tumor
-0.3
CPT0020120003
Tumor
-0.3
CPT0012670003
Tumor
-0.3
CPT0089020003
Tumor
-0.4
CPT0065930003
Tumor
-0.4
CPT0065430003
Tumor
-0.4
CPT0088480003
Tumor
-0.4
CPT0015730003
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0092730003
Tumor
-0.5
CPT0012280003
Tumor
-0.5
CPT0092290003
Tumor
-0.5
CPT0078930003
Tumor
-0.5
CPT0006900003
Tumor
-0.5
CPT0075560003
Tumor
-0.6
CPT0012180003
Tumor
-0.6
CPT0064370003
Tumor
-0.6
CPT0079380003
Tumor
-0.6
CPT0019990003
Tumor
-0.7
CPT0087040003
Tumor
-0.7
CPT0023690003
Tumor
-0.7
CPT0077310003
Tumor
-0.7
CPT0065810003
Tumor
-0.8
CPT0065690003
Tumor
-0.8
CPT0006630003
Tumor
-0.9
CPT0015810003
Tumor
-0.9
CPT0078510003
Tumor
-0.9
CPT0066470004
Tumor
-1.0
CPT0011410003
Tumor
-1.0
CPT0079180003
Tumor
-1.1
CPT0092790003
Tumor
-1.2
CPT0086360003
Tumor
-1.2
CPT0025170003
Tumor
-1.3
CPT0001500009
Tumor
-1.4
CPT0081880003
Tumor
-1.7
CPT0025290003
Tumor
-2.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
