We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBAP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
64.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
60.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
60.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
53.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
50.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
50.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
49.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
46.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
45.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
44.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
42.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
42.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
40.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
39.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
38.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
36.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
36.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
36.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
34.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
34.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
34.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
33.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
33.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
33.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
31.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
31.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
30.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
29.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
29.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
29.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
28.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
28.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
28.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
28.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
27.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
27.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
26.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
26.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
26.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
25.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
24.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
23.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
22.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
22.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
21.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
20.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
20.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
20.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
20.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
19.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
19.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
19.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
18.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
17.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
17.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
17.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
16.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
15.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
15.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
15.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
14.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
13.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBAP1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
76.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
67.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
64.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
64.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
63.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
58.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
56.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
54.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
54.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
53.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
52.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
52.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
51.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
51.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
50.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
50.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
49.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
48.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
48.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
48.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
48.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
48.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
47.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
47.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
46.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
46.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
46.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
46.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
46.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
46.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
45.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
45.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
45.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
45.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
45.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
45.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
44.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
44.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
44.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
44.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
44.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
44.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
44.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
43.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
43.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
43.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
43.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
43.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
43.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
43.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
42.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
42.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
42.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
42.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
42.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
42.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
42.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
42.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
41.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
41.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
41.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
40.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
40.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
40.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
40.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
40.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
40.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
40.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
40.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
40.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
40.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
40.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
40.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
40.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
40.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
40.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
40.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
40.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
40.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
39.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
39.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
39.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
39.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
39.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
38.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
38.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
38.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
38.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
38.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
38.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
38.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
38.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
38.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
38.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
38.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
38.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
38.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
38.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
38.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
38.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
38.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
37.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
37.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
37.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
37.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
37.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
37.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
37.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
37.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
37.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
37.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
37.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
37.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
36.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
36.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
36.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
36.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
36.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
36.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
36.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
36.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
36.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
36.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
36.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
36.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
36.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
35.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
35.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
35.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
35.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
35.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
35.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
35.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
35.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
35.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
35.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
35.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
35.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
35.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
35.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
35.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
34.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
34.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
34.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
34.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
34.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
34.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
34.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
34.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
34.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
34.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
34.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
34.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
34.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
34.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
34.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
34.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
34.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
34.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
34.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
34.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
33.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
33.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
33.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
33.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
33.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
33.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
33.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
33.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
33.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
33.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
33.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
33.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
33.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
33.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
33.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
33.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
32.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
32.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
32.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
32.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
32.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
32.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
32.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
32.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
32.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
32.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
32.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
32.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
31.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
31.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
31.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
31.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
31.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
31.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
31.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
31.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
31.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
31.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
31.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
31.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
31.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
31.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
31.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
31.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
31.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
31.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
31.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
31.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
31.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
31.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
31.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
31.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
31.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
31.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
31.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
31.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
31.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
30.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
30.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
30.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
30.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
30.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
30.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
30.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
30.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
30.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
30.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
30.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
30.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
29.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
29.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
29.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
29.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
29.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
29.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
29.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
29.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
29.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
29.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
29.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
29.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
29.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
29.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
29.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
29.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
29.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
29.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
28.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
28.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
28.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
28.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
28.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
28.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
28.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
28.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
28.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
28.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
28.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
28.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
28.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
28.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
28.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
28.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
28.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
28.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
28.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
28.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
28.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
27.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
27.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
27.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
27.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
27.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
27.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
27.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
27.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
27.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
27.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
27.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
27.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
27.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
27.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
27.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
27.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
27.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
27.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
26.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
26.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
26.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
26.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
26.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
26.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
26.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
26.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
26.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
26.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
26.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
26.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
26.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
26.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
26.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
26.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
26.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
26.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
26.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
26.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
26.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
26.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
26.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
26.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
26.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
26.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
26.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
26.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
26.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
26.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
25.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
25.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
25.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
25.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
25.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
25.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
25.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
25.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
25.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
25.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
25.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
25.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
25.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
25.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
25.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
25.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
25.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
24.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
24.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
24.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
24.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
24.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
24.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
24.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
24.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
24.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
24.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
24.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
24.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
24.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
24.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
24.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
24.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
24.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
24.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
24.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
23.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
23.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
23.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
23.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
23.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
23.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
23.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
23.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
23.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
23.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
23.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
23.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
23.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
23.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
23.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
23.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
23.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
23.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
23.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
23.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
23.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
23.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
23.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
23.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
23.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
23.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
22.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
22.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
22.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
22.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
22.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
22.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
22.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
22.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
22.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
22.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
22.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
22.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
22.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
22.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
22.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
22.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
21.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
21.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
21.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
21.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
21.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
21.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
21.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
21.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
21.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
21.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
21.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
21.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
20.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
20.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
20.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
20.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
20.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
20.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
20.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
20.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
20.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
20.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
20.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
20.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
20.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
20.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
20.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
20.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
20.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
20.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
20.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
20.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
19.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
19.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
19.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
19.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
19.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
19.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
19.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
19.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
19.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
18.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
18.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
18.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
18.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
18.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
18.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
18.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
18.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
18.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
18.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
17.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
17.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
17.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
17.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
17.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
17.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
17.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
17.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
16.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
16.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
16.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
16.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
16.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
15.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
15.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
15.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
15.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
15.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
15.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
15.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
15.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
15.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
15.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
15.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
14.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
14.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
14.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
14.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
14.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
14.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
14.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
14.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
13.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
13.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
13.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
13.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
13.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
13.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
13.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
12.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
12.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
12.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
12.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
12.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
12.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
11.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
11.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
10.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
10.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBAP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
64.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
56.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
54.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
53.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
52.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
51.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
50.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
49.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
46.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
46.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
44.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
44.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
42.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
42.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
42.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
42.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
42.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
41.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
41.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
41.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
39.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
39.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
38.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
38.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
38.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
38.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
38.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
37.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
37.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
36.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
36.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
35.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
35.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
35.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
34.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
34.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
34.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
34.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
33.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
33.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
33.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
32.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
32.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
32.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
32.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
32.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
31.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
31.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
31.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
30.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
30.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
30.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
30.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
30.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
29.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
29.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
29.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
29.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
28.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
28.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
28.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
28.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
27.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
27.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
27.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
26.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
26.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
26.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
25.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
25.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
24.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
24.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
24.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
23.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
23.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
23.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
23.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
21.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
21.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
21.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
21.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
20.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
20.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
19.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
19.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
19.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
18.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
17.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
16.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
16.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
16.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBAP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
174.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
113.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
95.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
76.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
76.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
72.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
68.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
68.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
67.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
65.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
63.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
62.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
61.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
60.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
59.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
59.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
58.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
58.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
58.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
57.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
56.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
56.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
55.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
54.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
54.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
53.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
53.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
53.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
51.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
51.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
50.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
50.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
50.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
50.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
50.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
49.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
49.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
49.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
48.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
48.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
47.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
47.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
47.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
46.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
46.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
46.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
45.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
45.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
45.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
45.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
45.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
45.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
45.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
44.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
44.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
44.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
44.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
44.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
43.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
43.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
43.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
43.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
43.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
42.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
42.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
42.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
42.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
42.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
42.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
42.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
41.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
41.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
41.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
41.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
41.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
41.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
40.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
40.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
40.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
40.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
40.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
40.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
40.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
40.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
40.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
40.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
39.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
39.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
39.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
39.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
38.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
38.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
38.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
38.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
38.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
38.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
38.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
37.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
37.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
37.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
36.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
36.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
35.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
35.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
35.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
35.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
35.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
35.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
34.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
34.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
34.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
34.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
34.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
34.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
34.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
33.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
33.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
33.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
33.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
32.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
32.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
32.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
32.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
32.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
32.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
32.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
32.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
32.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
32.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
32.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
32.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
32.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
31.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
31.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
31.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
31.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
31.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
31.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
31.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
31.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
31.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
31.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
31.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
30.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
30.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
30.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
30.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
30.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
30.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
30.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
30.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
30.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
30.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
29.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
29.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
29.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
29.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
29.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
29.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
29.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
29.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
29.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
28.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
28.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
28.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
28.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
28.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
28.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
28.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
28.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
27.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
27.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
27.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
27.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
27.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
27.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
26.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
26.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
26.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
26.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
26.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
26.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
26.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
26.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
26.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
25.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
25.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
25.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
25.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
25.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
25.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
25.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
25.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
25.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
25.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
25.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
25.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
24.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
24.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
24.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
24.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
24.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
24.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
24.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
24.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
24.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
23.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
23.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
23.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
23.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
23.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
23.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
23.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
23.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
23.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
23.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
23.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
23.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
23.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
23.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
22.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
22.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
22.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
22.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
22.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
22.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
21.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
21.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
21.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
21.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
21.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
21.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
21.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
21.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
20.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
20.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
20.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
20.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
20.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
20.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
20.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
19.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
19.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
19.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
19.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
19.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
18.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
18.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
18.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
18.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
18.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
18.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
18.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
17.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
17.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
17.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
16.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
16.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
16.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
16.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
15.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
15.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
15.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
15.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
15.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
14.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
14.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
14.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
13.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
13.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
13.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
11.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
10.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
9.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
8.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
8.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
1.7
CPT0002270011
Tumor
0.7
CPT0078510003
Tumor
0.7
CPT0065930003
Tumor
0.5
CPT0012550003
Tumor
0.4
CPT0089460004
Tumor
0.4
CPT0009000003
Tumor
0.4
CPT0011410003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0078800003
Tumor
0.2
CPT0079180003
Tumor
0.2
CPT0078530001
Normal
0.2
CPT0011240003
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0088970003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0089020003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0012570003
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0079230003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0077320001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0063640001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0078660003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0012920003
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0018250001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0014350001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0069010001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0086950003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0006440003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0092740003
Normal
0.0
CPT0088500001
Normal
0.0
CPT0026410003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0069160003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0077140001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0010170001
Normal
-0.2
CPT0015730003
Tumor
-0.2
CPT0088480003
Tumor
-0.2
CPT0012080003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0012180003
Tumor
-0.2
CPT0092310003
Normal
-0.2
CPT0063630003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0086870003
Tumor
-0.3
CPT0007320003
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0014450004
Tumor
-0.3
CPT0025050003
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0024670003
Tumor
-0.3
CPT0001180009
Tumor
-0.4
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
