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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OXR1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
121.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
54.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
54.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
48.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
44.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
43.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
41.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
41.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
41.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
41.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
39.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
38.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
36.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
35.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
34.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
34.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
33.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
33.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
32.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
31.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
30.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
28.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
28.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
27.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
27.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
26.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
24.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
23.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
23.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
22.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
21.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
20.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
20.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
19.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
18.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
18.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
18.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
18.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
17.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
17.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
16.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
15.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
15.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
15.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
15.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
14.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
14.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
14.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
13.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
13.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
12.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
12.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
11.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
11.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
10.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
10.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
10.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
9.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
9.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
9.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
8.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
5.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OXR1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
136.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
136.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
108.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
103.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
94.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
93.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
84.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
69.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
60.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
60.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
58.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
58.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
57.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
55.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
53.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
53.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
53.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
52.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
52.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
51.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
51.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
50.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
50.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
50.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
50.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
49.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
49.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
49.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
48.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
48.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
48.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
47.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
47.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
46.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
45.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
45.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
45.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
45.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
45.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
45.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
44.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
44.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
44.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
43.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
42.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
42.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
41.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
41.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
41.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
41.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
41.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
41.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
40.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
40.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
40.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
40.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
40.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
40.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
39.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
39.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
39.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
39.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
39.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
39.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
39.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
38.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
38.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
38.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
38.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
38.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
38.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
37.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
37.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
37.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
36.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
36.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
36.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
36.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
36.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
36.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
36.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
35.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
35.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
35.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
35.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
35.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
34.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
34.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
34.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
34.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
33.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
33.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
33.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
33.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
33.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
33.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
33.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
32.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
32.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
32.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
32.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
32.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
32.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
31.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
31.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
31.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
31.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
31.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
31.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
31.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
31.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
31.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
31.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
31.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
31.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
31.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
31.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
31.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
31.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
31.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
30.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
30.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
30.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
30.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
30.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
30.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
30.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
30.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
29.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
29.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
29.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
29.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
29.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
29.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
29.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
29.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
29.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
29.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
29.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
28.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
28.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
28.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
28.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
28.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
28.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
28.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
28.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
28.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
28.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
28.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
28.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
27.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
27.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
27.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
27.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
27.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
27.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
27.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
27.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
27.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
27.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
27.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
27.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
27.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
27.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
27.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
27.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
26.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
26.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
26.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
26.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
26.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
26.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
26.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
26.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
26.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
26.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
26.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
26.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
25.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
25.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
25.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
25.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
25.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
25.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
25.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
25.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
25.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
25.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
24.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
24.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
24.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
24.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
24.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
24.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
24.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
24.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
24.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
24.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
24.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
24.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
24.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
24.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
24.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
24.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
23.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
23.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
23.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
23.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
23.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
23.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
23.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
23.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
23.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
23.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
23.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
23.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
23.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
23.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
23.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
23.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
23.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
23.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
23.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
23.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
23.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
23.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
22.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
22.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
22.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
22.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
22.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
22.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
22.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
22.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
22.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
22.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
22.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
22.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
22.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
22.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
22.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
21.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
21.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
21.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
21.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
21.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
21.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
21.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
21.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
21.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
21.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
21.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
21.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
21.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
21.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
21.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
21.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
21.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
21.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
21.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
20.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
20.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
20.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
20.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
20.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
20.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
20.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
20.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
20.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
20.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
20.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
20.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
20.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
20.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
20.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
20.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
20.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
20.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
20.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
20.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
19.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
19.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
19.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
19.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
19.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
19.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
19.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
19.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
19.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
19.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
19.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
19.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
19.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
19.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
19.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
19.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
19.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
19.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
19.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
19.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
19.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
19.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
18.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
18.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
18.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
18.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
18.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
18.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
18.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
18.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
18.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
18.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
18.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
18.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
18.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
18.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
18.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
18.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
18.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
18.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
18.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
18.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
18.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
18.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
17.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
17.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
17.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
17.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
17.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
17.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
17.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
17.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
17.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
17.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
17.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
17.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
17.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
17.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
17.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
17.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
17.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
17.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
17.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
16.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
16.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
16.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
16.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
16.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
16.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
16.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
16.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
16.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
16.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
15.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
15.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
15.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
15.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
15.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
15.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
15.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
15.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
15.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
15.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
15.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
15.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
15.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
15.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
15.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
14.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
14.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
14.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
14.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
14.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
14.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
14.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
14.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
14.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
14.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
14.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
14.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
14.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
14.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
13.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
13.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
13.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
13.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
13.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
13.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
13.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
13.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
13.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
13.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
13.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
13.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
12.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
12.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
12.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
12.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
12.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
12.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
12.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
11.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
11.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
11.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
11.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
11.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
11.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
11.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
11.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
11.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
10.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
10.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
10.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
10.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
10.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
10.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
10.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
8.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
8.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
8.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
8.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
8.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
7.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
7.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
7.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
7.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
6.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
5.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
5.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
4.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
3.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OXR1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
153.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
131.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
126.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
120.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
112.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
93.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
89.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
78.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
78.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
76.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
75.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
72.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
66.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
66.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
63.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
60.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
59.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
58.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
57.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
56.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
55.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
52.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
52.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
50.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
49.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
48.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
48.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
47.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
46.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
46.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
45.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
44.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
43.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
43.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
43.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
42.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
42.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
41.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
41.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
41.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
41.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
40.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
39.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
39.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
39.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
39.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
39.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
38.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
38.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
38.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
37.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
37.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
37.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
37.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
37.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
36.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
36.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
36.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
36.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
36.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
34.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
34.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
33.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
32.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
32.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
32.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
31.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
31.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
31.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
31.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
31.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
31.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
30.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
29.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
29.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
28.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
27.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
27.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
26.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
26.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
26.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
24.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
24.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
24.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
24.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
23.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
21.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
20.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
20.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
20.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
20.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
17.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
14.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
14.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
12.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
12.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OXR1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
283.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
207.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
191.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
180.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
170.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
158.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
156.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
155.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
142.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
135.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
131.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
123.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
117.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
116.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
113.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
112.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
107.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
103.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
99.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
97.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
97.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
97.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
89.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
88.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
85.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
84.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
83.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
81.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
81.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
80.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
79.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
77.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
76.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
76.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
73.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
73.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
72.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
72.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
70.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
69.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
68.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
68.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
68.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
67.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
66.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
64.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
62.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
61.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
61.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
61.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
60.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
60.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
58.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
58.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
56.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
56.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
56.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
55.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
55.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
54.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
52.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
52.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
51.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
51.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
51.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
49.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
49.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
48.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
48.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
48.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
48.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
47.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
47.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
47.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
47.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
46.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
45.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
44.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
44.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
44.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
44.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
44.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
43.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
42.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
42.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
41.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
41.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
41.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
40.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
40.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
40.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
40.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
39.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
39.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
39.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
39.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
39.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
39.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
39.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
38.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
37.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
37.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
37.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
36.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
36.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
35.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
35.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
35.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
35.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
35.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
34.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
33.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
33.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
33.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
32.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
32.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
32.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
32.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
31.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
31.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
31.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
31.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
31.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
30.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
30.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
30.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
29.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
29.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
29.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
28.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
28.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
28.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
27.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
27.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
27.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
27.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
27.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
27.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
27.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
27.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
27.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
27.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
26.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
26.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
26.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
26.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
25.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
25.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
24.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
24.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
24.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
24.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
24.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
24.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
24.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
24.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
23.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
23.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
23.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
22.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
22.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
22.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
22.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
22.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
22.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
22.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
22.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
21.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
21.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
21.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
20.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
20.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
20.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
20.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
20.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
20.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
19.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
19.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
19.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
19.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
19.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
19.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
19.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
18.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
18.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
18.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
18.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
17.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
17.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
17.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
17.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
16.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
16.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
16.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
16.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
16.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
16.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
16.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
15.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
15.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
15.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
15.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
15.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
15.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
14.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
14.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
14.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
14.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
14.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
13.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
13.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
13.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
13.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
13.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
13.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
12.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
12.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
12.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
12.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
12.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
12.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
11.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
11.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
11.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
11.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
11.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
10.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
10.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
10.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
9.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
9.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
9.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
9.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
9.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
9.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
9.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
8.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
8.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
8.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
8.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
7.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
6.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
5.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
5.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
5.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
4.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
4.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
4.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
4.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
3.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
3.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
2.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
1.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
1.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
2.0
CPT0078660003
Tumor
1.2
CPT0012640003
Normal
1.1
CPT0001260009
Tumor
0.8
CPT0017850003
Tumor
0.8
CPT0000640003
Tumor
0.8
CPT0014450004
Tumor
0.7
CPT0001230001
Normal
0.7
CPT0079300001
Normal
0.7
CPT0002370001
Normal
0.6
CPT0088550004
Tumor
0.6
CPT0079380003
Tumor
0.6
CPT0009020003
Normal
0.6
CPT0079510001
Normal
0.6
CPT0025920001
Normal
0.5
CPT0069000003
Tumor
0.5
CPT0069190001
Normal
0.5
CPT0065430003
Tumor
0.5
CPT0076330003
Tumor
0.5
CPT0024680001
Normal
0.4
CPT0069010001
Normal
0.4
CPT0001510001
Normal
0.4
CPT0002350011
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0019160001
Normal
0.3
CPT0001550001
Normal
0.3
CPT0063330001
Normal
0.3
CPT0086890003
Normal
0.3
CPT0088640003
Normal
0.3
CPT0001340003
Tumor
0.3
CPT0086830003
Normal
0.3
CPT0066480003
Tumor
0.3
CPT0007870001
Normal
0.3
CPT0017410003
Tumor
0.3
CPT0012920003
Normal
0.3
CPT0078670001
Normal
0.3
CPT0010120001
Normal
0.3
CPT0023690003
Tumor
0.3
CPT0009080003
Normal
0.3
CPT0078940001
Normal
0.3
CPT0020130001
Normal
0.3
CPT0079000001
Normal
0.2
CPT0092790003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0088500001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0012670003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0007470001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0017450001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0077500001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0092190003
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0012180003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0023710001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0063640001
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0015810003
Tumor
-0.2
CPT0012080003
Tumor
-0.2
CPT0086950003
Tumor
-0.2
CPT0006950001
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0089460004
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0092800003
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0079410003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0078930003
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0014370004
Tumor
-0.2
CPT0065450001
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0077490003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0000790001
Normal
-0.2
CPT0077110003
Tumor
-0.3
CPT0025050003
Tumor
-0.3
CPT0001180009
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0025230003
Tumor
-0.3
CPT0065820001
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0063320003
Tumor
-0.3
CPT0019990003
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0024670003
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0066430001
Normal
-0.3
CPT0001500009
Tumor
-0.3
CPT0006630003
Tumor
-0.3
CPT0088970003
Tumor
-0.3
CPT0011410003
Tumor
-0.3
CPT0000870016
Tumor
-0.4
CPT0013790003
Normal
-0.4
CPT0012280003
Tumor
-0.4
CPT0010110003
Tumor
-0.4
CPT0026410003
Tumor
-0.4
CPT0015730003
Tumor
-0.4
CPT0012900004
Tumor
-0.4
CPT0079270003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0002270011
Tumor
-0.4
CPT0000890001
Normal
-0.4
CPT0001220008
Tumor
-0.5
CPT0065870003
Tumor
-0.5
CPT0007320003
Tumor
-0.5
CPT0012370003
Tumor
-0.5
CPT0079480003
Tumor
-0.5
CPT0025350003
Tumor
-0.5
CPT0006440003
Tumor
-0.5
CPT0092740003
Normal
-0.5
CPT0065810003
Tumor
-0.5
CPT0066470004
Tumor
-0.5
CPT0088480003
Tumor
-0.6
CPT0078990003
Tumor
-0.6
CPT0001540009
Tumor
-0.7
CPT0023350003
Tumor
-0.7
CPT0078800003
Tumor
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.