HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:4.2 nTPM
HPA Brain:20.6 nTPM
GTEx:4.2 nTPM
FANTOM5:12.3 Scaled Tags Per Million
Pig:10.7 nTPM
Mouse:11.3 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042928Antibody HPA052223
Glial cells LowNot detected
Neuronal cells MediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 20.6
Sample id Sample description nTPM
Hippocampus
nTPM: 18.9
1898 Male, age 80, left hemisphere 20.4
2529 Female, age 94, left hemisphere 20.2
2148 Female, age 91, left hemisphere 19.4
2621 Female, age 67, right hemisphere 19.1
1911 Female, age 85, right hemisphere 17.9
1855 Male, age 76, left hemisphere 16.3
Dentate gyrus
nTPM: 18.3
2528 Male, age 74, both hemispheres 19.3
1927 Female, age 91, both hemispheres 19.2
2531 Female, age 67, both hemispheres 18.8
2010 Male, age 76, both hemispheres 18.3
2530 Female, age 94, left hemisphere 17.2
2246 Female, age 85, both hemispheres 17.0
Entorhinal gyrus
nTPM: 19.0
2117 Female, age 91, right hemisphere 21.9
1938 Female, age 85, left hemisphere 21.5
2686 Male, age 75, right hemisphere 18.8
1787 Male, age 76, left hemisphere 17.8
2764 Male, age 80, right hemisphere 17.4
2613 Female, age 94, left hemisphere 16.3
Hippocampus, CA1
nTPM: 17.4
1873 Female, age 85, both hemispheres 18.7
2527 Male, age 74, both hemispheres 18.5
2045 Male, age 76, both hemispheres 18.0
2749 Male, age 80, left hemisphere 15.9
2082 Female, age 91, right hemisphere 15.8
Hippocampus, CA2
nTPM: 19.6
2249 Male, age 74, both hemispheres 22.2
1963 Male, age 80, left hemisphere 20.6
1940 Female, age 85, left hemisphere 19.6
1892 Male, age 76, both hemispheres 19.3
2113 Female, age 91, right hemisphere 18.1
2437 Female, age 94, left hemisphere 17.9
Hippocampus, CA3
nTPM: 20.6
2436 Male, age 74, both hemispheres 36.6
2620 Female, age 94, left hemisphere 19.5
1867 Male, age 76, both hemispheres 19.2
1891 Female, age 85, both hemispheres 18.2
2861 Female, age 67, both hemispheres 16.2
2137 Male, age 80, left hemisphere 14.1
Parahippocampal cortex
nTPM: 18.7
2693 Female, age 94, both hemispheres 21.9
2018 Male, age 76, both hemispheres 20.6
2250 Female, age 67, right hemisphere 19.9
1850 Male, age 80, both hemispheres 19.7
2532 Female, age 72, left hemisphere 18.8
1933 Female, age 85, both hemispheres 18.5
1990 Female, age 91, right hemisphere 18.0
2245 Female, age 91, both hemispheres 18.0
2622 Female, age 67, right hemisphere 16.8
2692 Male, age 74, both hemispheres 15.2
Perirhinal gyrus
nTPM: 20.2
1841 Female, age 85, right hemisphere 21.8
1794 Male, age 80, right hemisphere 20.5
1847 Female, age 91, left hemisphere 20.2
2848 Male, age 76, right hemisphere 20.0
2521 Female, age 94, right hemisphere 18.5
Subiculum
nTPM: 17.5
2729 Female, age 91, right hemisphere 21.1
1977 Female, age 85, both hemispheres 18.4
2042 Male, age 76, both hemispheres 17.8
1901 Male, age 80, both hemispheres 16.8
2619 Male, age 74, both hemispheres 16.6
2438 Female, age 94, left hemisphere 14.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 4.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.2
Samples: 197

Max nTPM: 7.9
Min nTPM: 1.9
Std nTPM: 0.9
Median nTPM: 4.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 7.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 7.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 6.9
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 6.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 6.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 6.8
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 6.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 6.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 6.2
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 6.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 5.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 12.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.3
FF:10153-102I9 76 years, female 16.2
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 10.7
Pig sample Sample description nTPM
Subiculum
nTPM: 10.7
Samples: 4

Max nTPM: 11.0
Min nTPM: 10.6
Sample A Female 10.6
Sample B Female 10.7
Sample C Male 10.6
Sample D Male 11.0
Dorsal hippocampus
nTPM: 10.3
Samples: 4

Max nTPM: 10.8
Min nTPM: 9.8
Sample A Female 9.8
Sample B Female 10.5
Sample C Male 10.8
Sample D Male 10.1
Entorhinal cortex
nTPM: 10.2
Samples: 4

Max nTPM: 10.9
Min nTPM: 9.7
Sample A Female 10.2
Sample B Female 10.0
Sample C Male 9.7
Sample D Male 10.9
Ventral hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 11.9
Min nTPM: 8.7
Sample A Female 11.9
Sample B Female 10.8
Sample C Male 8.7
Sample D Male 10.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 11.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.9
Samples: 4

Max nTPM: 11.9
Min nTPM: 10.0
Sample A Male 11.9
Sample B Male 11.5
Sample C Female 10.0
Sample D Female 10.3
Hippocampal formation
nTPM: 11.3
Samples: 4

Max nTPM: 12.3
Min nTPM: 10.0
Sample A Male 11.5
Sample B Male 12.3
Sample C Female 11.5
Sample D Female 10.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
68633146 Antisense, RP_050125_02_E01, Mouse strain C57BL/6J (56 days, male) 2.3

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