We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SFXN1 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
44.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
42.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
42.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
37.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
36.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
36.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
36.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
33.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
32.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
32.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
31.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
30.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
28.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
27.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
26.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
25.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
24.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
24.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
24.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
23.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
22.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
21.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
21.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
21.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
20.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
20.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
20.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
20.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
19.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
19.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
18.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
17.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
17.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
17.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
17.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
16.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
16.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
16.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
16.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
15.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
15.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
14.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
14.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
13.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
13.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
13.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
13.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
13.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
12.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
12.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
11.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
11.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
11.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
10.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
9.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SFXN1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
84.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
74.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
72.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
67.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
67.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
66.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
65.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
61.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
59.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
58.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
57.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
56.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
56.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
55.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
55.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
55.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
54.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
53.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
53.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
53.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
51.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
51.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
51.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
51.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
50.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
50.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
50.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
50.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
49.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
49.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
49.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
49.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
48.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
48.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
48.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
48.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
47.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
47.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
46.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
46.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
46.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
45.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
45.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
45.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
43.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
43.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
43.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
43.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
43.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
43.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
43.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
43.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
43.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
43.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
43.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
42.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
42.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
42.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
41.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
41.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
41.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
41.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
41.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
41.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
41.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
40.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
40.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
40.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
40.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
40.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
40.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
39.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
39.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
39.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
39.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
39.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
38.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
38.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
38.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
38.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
38.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
38.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
38.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
38.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
38.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
37.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
37.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
37.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
37.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
37.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
37.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
37.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
37.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
37.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
37.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
37.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
37.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
37.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
36.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
36.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
36.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
36.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
36.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
36.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
36.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
36.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
36.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
36.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
35.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
35.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
35.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
35.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
35.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
35.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
35.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
35.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
35.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
34.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
34.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
34.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
34.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
34.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
34.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
34.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
34.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
34.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
33.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
33.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
33.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
33.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
33.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
33.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
33.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
33.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
33.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
33.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
33.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
33.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
32.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
32.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
32.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
32.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
32.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
32.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
32.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
32.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
32.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
32.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
32.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
32.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
32.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
32.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
31.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
31.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
31.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
31.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
31.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
31.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
31.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
31.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
31.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
31.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
31.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
30.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
30.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
30.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
30.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
30.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
30.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
30.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
30.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
30.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
30.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
30.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
30.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
30.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
29.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
29.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
29.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
29.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
29.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
29.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
29.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
29.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
29.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
28.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
28.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
28.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
28.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
28.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
28.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
28.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
28.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
28.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
28.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
28.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
28.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
28.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
28.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
28.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
28.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
28.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
28.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
27.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
27.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
27.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
27.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
27.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
27.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
27.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
27.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
27.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
26.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
26.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
26.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
26.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
26.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
26.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
26.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
26.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
26.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
26.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
26.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
26.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
26.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
26.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
26.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
26.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
26.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
26.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
25.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
25.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
25.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
25.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
25.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
25.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
25.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
25.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
25.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
25.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
25.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
25.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
25.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
25.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
25.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
25.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
24.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
24.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
24.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
24.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
24.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
24.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
24.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
24.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
24.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
24.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
24.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
24.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
24.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
24.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
24.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
24.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
24.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
24.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
23.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
23.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
23.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
23.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
23.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
23.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
23.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
23.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
23.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
23.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
23.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
22.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
22.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
22.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
22.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
22.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
22.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
22.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
22.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
22.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
22.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
22.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
22.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
22.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
22.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
22.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
22.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
22.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
22.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
22.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
22.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
22.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
21.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
21.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
21.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
21.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
21.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
21.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
21.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
21.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
21.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
21.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
21.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
21.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
21.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
21.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
21.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
21.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
21.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
21.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
21.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
21.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
21.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
20.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
20.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
20.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
20.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
20.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
20.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
20.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
20.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
20.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
20.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
20.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
19.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
19.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
19.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
19.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
19.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
19.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
19.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
19.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
19.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
19.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
19.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
19.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
19.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
19.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
18.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
18.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
18.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
18.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
18.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
18.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
18.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
18.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
18.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
18.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
18.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
18.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
18.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
18.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
18.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
18.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
18.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
18.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
17.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
17.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
17.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
17.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
17.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
17.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
17.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
17.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
17.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
17.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
17.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
17.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
17.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
16.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
16.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
16.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
16.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
16.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
16.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
16.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
16.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
16.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
16.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
16.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
16.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
16.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
16.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
15.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
15.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
15.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
15.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
15.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
15.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
15.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
15.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
15.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
15.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
15.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
15.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
14.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
14.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
14.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
14.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
14.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
14.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
14.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
14.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
14.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
14.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
14.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
14.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
14.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
14.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
14.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
14.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
13.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
13.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
13.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
13.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
13.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
13.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
13.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
13.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
13.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
13.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
13.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
12.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
12.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
12.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
12.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
12.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
12.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
12.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
12.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
12.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
12.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
12.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
11.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
11.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
11.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
11.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
11.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
11.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
11.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
10.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
10.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
10.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
10.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
10.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
10.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
10.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
9.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
9.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
9.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
7.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
7.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
6.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
5.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SFXN1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
71.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
67.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
65.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
64.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
64.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
60.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
59.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
53.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
52.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
52.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
52.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
50.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
50.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
50.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
48.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
47.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
47.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
47.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
45.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
44.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
44.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
44.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
44.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
43.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
43.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
41.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
41.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
41.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
40.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
39.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
39.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
39.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
38.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
38.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
38.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
38.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
38.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
38.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
37.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
37.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
36.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
36.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
36.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
36.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
36.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
36.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
36.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
35.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
35.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
35.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
34.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
33.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
33.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
33.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
33.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
33.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
32.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
31.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
31.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
31.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
30.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
29.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
29.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
29.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
28.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
28.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
27.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
27.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
27.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
25.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
25.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
25.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
25.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
24.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
24.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
24.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
22.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
22.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
22.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
21.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
20.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
20.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
19.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
19.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
19.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
19.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
19.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
18.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
17.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
17.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
16.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
15.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
15.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
13.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SFXN1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
93.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
70.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
65.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
64.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
63.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
59.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
51.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
49.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
48.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
46.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
45.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
45.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
44.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
42.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
41.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
40.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
39.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
38.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
38.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
37.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
37.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
36.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
35.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
33.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
33.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
33.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
33.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
33.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
33.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
32.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
32.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
32.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
32.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
32.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
32.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
32.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
31.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
31.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
31.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
31.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
30.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
30.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
30.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
30.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
28.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
28.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
28.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
28.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
28.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
27.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
27.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
27.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
26.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
26.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
26.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
26.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
25.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
25.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
25.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
25.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
25.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
25.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
25.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
25.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
25.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
25.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
25.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
24.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
24.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
24.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
24.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
24.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
24.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
24.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
24.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
23.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
23.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
23.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
23.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
23.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
23.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
23.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
23.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
23.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
23.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
23.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
23.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
23.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
23.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
22.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
22.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
22.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
22.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
22.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
22.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
22.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
22.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
22.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
22.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
21.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
21.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
21.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
21.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
21.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
21.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
21.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
21.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
20.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
20.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
20.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
20.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
20.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
20.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
20.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
20.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
20.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
20.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
19.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
19.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
19.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
18.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
18.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
18.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
18.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
18.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
18.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
18.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
18.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
17.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
17.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
17.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
17.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
17.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
17.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
17.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
17.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
17.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
17.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
16.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
16.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
16.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
16.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
16.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
16.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
16.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
16.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
16.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
16.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
16.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
15.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
15.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
15.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
15.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
15.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
15.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
15.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
15.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
15.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
15.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
15.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
15.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
15.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
15.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
15.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
14.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
14.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
14.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
14.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
14.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
14.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
14.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
14.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
14.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
14.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
13.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
13.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
13.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
13.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
13.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
13.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
13.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
13.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
13.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
13.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
12.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
12.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
12.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
12.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
12.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
12.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
12.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
12.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
12.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
12.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
12.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
12.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
12.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
12.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
12.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
11.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
11.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
11.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
11.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
11.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
11.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
11.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
11.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
11.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
11.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
10.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
10.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
10.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
10.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
10.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
10.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
10.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
10.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
10.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
9.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
9.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
9.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
9.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
9.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
9.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
9.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
9.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
8.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
8.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
8.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
8.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
8.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
8.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
7.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
7.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
7.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
6.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
6.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
5.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002270011
Tumor
1.3
CPT0065450001
Normal
1.0
CPT0089480003
Normal
0.8
CPT0006950001
Normal
0.7
CPT0078840001
Normal
0.7
CPT0066430001
Normal
0.7
CPT0076350001
Normal
0.7
CPT0000790001
Normal
0.7
CPT0092740003
Normal
0.6
CPT0001500009
Tumor
0.6
CPT0092310003
Normal
0.6
CPT0077140001
Normal
0.6
CPT0088780001
Normal
0.6
CPT0088920001
Normal
0.6
CPT0010170001
Normal
0.6
CPT0081620001
Normal
0.6
CPT0026420001
Normal
0.6
CPT0025610001
Normal
0.6
CPT0012770003
Normal
0.5
CPT0092800003
Normal
0.5
CPT0088710001
Normal
0.5
CPT0023360001
Normal
0.5
CPT0025060001
Normal
0.5
CPT0078670001
Normal
0.5
CPT0006730001
Normal
0.5
CPT0001350001
Normal
0.5
CPT0015730003
Tumor
0.5
CPT0087050003
Normal
0.5
CPT0024670003
Tumor
0.5
CPT0020020001
Normal
0.5
CPT0014350001
Normal
0.5
CPT0077500001
Normal
0.5
CPT0009080003
Normal
0.4
CPT0023710001
Normal
0.4
CPT0069000003
Tumor
0.4
CPT0069010001
Normal
0.4
CPT0020120003
Tumor
0.4
CPT0086370003
Normal
0.4
CPT0000890001
Normal
0.4
CPT0012570003
Normal
0.3
CPT0064400001
Normal
0.3
CPT0082010001
Normal
0.3
CPT0007470001
Normal
0.3
CPT0069160003
Tumor
0.3
CPT0025920001
Normal
0.3
CPT0012090003
Normal
0.3
CPT0078940001
Normal
0.3
CPT0079000001
Normal
0.3
CPT0079430001
Normal
0.3
CPT0089040001
Normal
0.3
CPT0013790003
Normal
0.2
CPT0014130001
Normal
0.2
CPT0086890003
Normal
0.2
CPT0066520001
Normal
0.2
CPT0007870001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0014470001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0081880003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0078660003
Tumor
0.1
CPT0000660001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0078530001
Normal
0.0
CPT0007320003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0018250001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0065820001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0079180003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0076330003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0089460004
Tumor
-0.2
CPT0001260009
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0088690003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0012280003
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0087040003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0012180003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0086820003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0077310003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0000780007
Tumor
-0.3
CPT0012900004
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0092160003
Tumor
-0.3
CPT0000870016
Tumor
-0.3
CPT0012920003
Normal
-0.3
CPT0086360003
Tumor
-0.3
CPT0085670003
Tumor
-0.3
CPT0063320003
Tumor
-0.4
CPT0025290003
Tumor
-0.4
CPT0019990003
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0078930003
Tumor
-0.4
CPT0088970003
Tumor
-0.4
CPT0012550003
Tumor
-0.4
CPT0014160003
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0081600003
Tumor
-0.4
CPT0088480003
Tumor
-0.4
CPT0069190001
Normal
-0.4
CPT0006900003
Tumor
-0.4
CPT0006630003
Tumor
-0.4
CPT0078830003
Tumor
-0.4
CPT0001220008
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0086030003
Tumor
-0.4
CPT0014450004
Tumor
-0.4
CPT0075130003
Tumor
-0.4
CPT0000640003
Tumor
-0.5
CPT0078800003
Tumor
-0.5
CPT0075720003
Tumor
-0.5
CPT0019130003
Tumor
-0.5
CPT0063630003
Tumor
-0.5
CPT0066470004
Tumor
-0.5
CPT0012080003
Tumor
-0.5
CPT0025170003
Tumor
-0.5
CPT0025580004
Tumor
-0.5
CPT0089020003
Tumor
-0.5
CPT0010160003
Tumor
-0.6
CPT0015810003
Tumor
-0.6
CPT0010120001
Normal
-0.6
CPT0088900003
Tumor
-0.6
CPT0009060003
Tumor
-0.6
CPT0015910003
Tumor
-0.6
CPT0092790003
Tumor
-0.6
CPT0025350003
Tumor
-0.6
CPT0075170001
Normal
-0.6
CPT0081990003
Tumor
-0.6
CPT0011240003
Tumor
-0.6
CPT0065930003
Tumor
-0.6
CPT0078990003
Tumor
-0.6
CPT0065430003
Tumor
-0.6
CPT0012640003
Normal
-0.6
CPT0077490003
Tumor
-0.6
CPT0002350011
Tumor
-0.6
CPT0066480003
Tumor
-0.6
CPT0001340003
Tumor
-0.6
CPT0021240003
Tumor
-0.7
CPT0012370003
Tumor
-0.7
CPT0088760003
Tumor
-0.7
CPT0065870003
Tumor
-0.7
CPT0079510001
Normal
-0.7
CPT0088630003
Tumor
-0.7
CPT0017850003
Tumor
-0.7
CPT0071150004
Tumor
-0.7
CPT0084560003
Tumor
-0.7
CPT0001180009
Tumor
-0.7
CPT0079300001
Normal
-0.8
CPT0017410003
Tumor
-0.8
CPT0077320001
Normal
-0.8
CPT0065690003
Tumor
-0.8
CPT0092730003
Tumor
-0.8
CPT0079230003
Tumor
-0.9
CPT0001270001
Normal
-0.9
CPT0092190003
Normal
-0.9
CPT0084590001
Normal
-1.0
CPT0079380003
Tumor
-1.1
CPT0088550004
Tumor
-1.2
CPT0011410003
Tumor
-1.2
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
