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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
169.9
nTPM
GTEx:
169.9
nTPM
FANTOM5:
30.0
Scaled Tags Per Million
Pig:
39.2
nTPM
Mouse:
5.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
169.9
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 169.9
Samples: 105
Max nTPM: 340.2
Min nTPM: 68.2
Std nTPM: 49.4
Median nTPM:
308_1
70 years, female
340.2
501_1
88 years, male
322.3
137_1
83 years, male
304.7
413_1
59 years, female
291.8
315_1
62 years, female
255.8
99_1
64 years, male
254.1
177_1
74 years, male
247.5
414_1
84 years, female
245.7
394_1
75 years, female
235.5
406_1
79 years, male
231.6
42_1
85 years, male
226.1
264_1
73 years, female
222.5
480_1
63 years, male
216.5
526_1
61 years, male
215.5
109_1
81 years, female
211.9
320_1
89 years, female
211.1
17_1
71 years, male
210.7
389_1
86 years, female
209.7
415_1
77 years, female
208.9
288_1
66 years, female
206.3
189_1
76 years, male
204.7
117_1
61 years, male
204.3
377_1
82 years, female
203.1
265_1
87 years, male
202.8
4_1
88 years, female
202.4
81_1
67 years, male
199.3
452_1
88 years, female
198.9
142_1
61 years, female
196.5
126_1
63 years, male
196.3
468_1
89 years, male
194.8
18_1
88 years, male
191.9
217_1
76 years, male
191.8
404_1
82 years, female
190.8
324_1
76 years, male
190.1
506_1
65 years, male
189.2
375_1
74 years, female
185.5
491_1
89 years, female
184.7
347_1
72 years, male
183.9
319_1
81 years, male
180.9
376_1
75 years, female
180.0
317_1
60 years, male
179.3
246_1
77 years, male
177.2
379_1
60 years, male
174.5
149_1
88 years, male
174.1
490_1
67 years, female
173.1
237_1
82 years, male
172.6
153_1
70 years, female
171.6
499_1
55 years, female
171.5
518_1
75 years, female
167.4
351_1
91 years, male
167.3
384_1
83 years, male
165.9
32_1
67 years, male
165.7
396_1
62 years, male
165.4
316_1
62 years, male
163.9
173_1
67 years, male
163.6
145_1
84 years, male
163.5
162_1
79 years, female
163.1
251_1
78 years, male
163.1
266_1
85 years, male
163.1
349_1
83 years, male
162.7
313_1
79 years, female
160.7
286_1
68 years, female
158.2
356_1
87 years, female
157.0
35_1
74 years, female
156.3
354_1
81 years, female
154.1
115_1
83 years, male
152.4
466_1
57 years, female
152.1
386_1
76 years, male
148.8
348_1
84 years, male
148.5
517_1
88 years, male
146.9
163_1
78 years, male
146.5
120_1
70 years, female
145.0
335_1
73 years, female
143.2
292_1
71 years, male
141.7
41_1
94 years, female
141.3
229_1
69 years, female
140.4
254_1
77 years, female
139.4
243_1
75 years, male
138.0
321_1
62 years, female
134.4
503_1
68 years, male
132.8
350_1
84 years, female
132.3
9_1
66 years, female
130.0
172_1
72 years, female
128.3
314_1
67 years, male
128.2
322_1
76 years, male
127.1
355_1
70 years, female
126.6
119_1
70 years, female
126.1
495_1
57 years, female
124.4
425_1
59 years, female
123.6
293_1
68 years, female
123.0
6_1
73 years, female
122.1
43_1
64 years, female
115.6
89_1
63 years, male
115.2
291_1
76 years, male
114.2
139_1
64 years, female
113.4
405_1
91 years, male
111.8
295_1
61 years, female
111.0
352_1
62 years, male
109.7
447_1
81 years, male
106.7
353_1
82 years, female
102.3
318_1
68 years, male
101.5
311_1
78 years, male
77.6
218_1
71 years, female
76.8
307_1
66 years, female
76.6
2_1
77 years, female
68.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.