HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:98.1 nTPM
HPA Brain:90.6 nTPM
GTEx:98.1 nTPM
FANTOM5:137.1 Scaled Tags Per Million
Pig:438.3 nTPM
Mouse:100.7 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028825Antibody CAB025488Antibody CAB058697
Glial cells HighLowMedium
Neuronal cells Not detectedNot detectedLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 90.6
Sample id Sample description nTPM
Hippocampus
nTPM: 59.2
1911 Female, age 85, right hemisphere 69.6
1898 Male, age 80, left hemisphere 66.7
2529 Female, age 94, left hemisphere 63.4
2621 Female, age 67, right hemisphere 59.2
2148 Female, age 91, left hemisphere 50.6
1855 Male, age 76, left hemisphere 46.0
Dentate gyrus
nTPM: 50.8
2246 Female, age 85, both hemispheres 70.1
2528 Male, age 74, both hemispheres 65.5
1927 Female, age 91, both hemispheres 62.0
2010 Male, age 76, both hemispheres 43.3
2531 Female, age 67, both hemispheres 38.2
2530 Female, age 94, left hemisphere 25.5
Entorhinal gyrus
nTPM: 72.4
1938 Female, age 85, left hemisphere 115.9
1787 Male, age 76, left hemisphere 82.6
2117 Female, age 91, right hemisphere 77.2
2764 Male, age 80, right hemisphere 66.7
2686 Male, age 75, right hemisphere 55.2
2613 Female, age 94, left hemisphere 36.7
Hippocampus, CA1
nTPM: 70.2
2749 Male, age 80, left hemisphere 87.5
2045 Male, age 76, both hemispheres 82.2
2527 Male, age 74, both hemispheres 76.5
1873 Female, age 85, both hemispheres 62.7
2082 Female, age 91, right hemisphere 42.1
Hippocampus, CA2
nTPM: 52.7
2249 Male, age 74, both hemispheres 68.6
1892 Male, age 76, both hemispheres 61.7
1940 Female, age 85, left hemisphere 53.9
2113 Female, age 91, right hemisphere 50.0
2437 Female, age 94, left hemisphere 49.5
1963 Male, age 80, left hemisphere 32.3
Hippocampus, CA3
nTPM: 65.3
2436 Male, age 74, both hemispheres 101.0
2137 Male, age 80, left hemisphere 78.9
1867 Male, age 76, both hemispheres 77.4
1891 Female, age 85, both hemispheres 66.0
2861 Female, age 67, both hemispheres 36.6
2620 Female, age 94, left hemisphere 32.1
Parahippocampal cortex
nTPM: 65.9
1933 Female, age 85, both hemispheres 113.8
2250 Female, age 67, right hemisphere 85.1
2245 Female, age 91, both hemispheres 70.9
1850 Male, age 80, both hemispheres 70.2
2693 Female, age 94, both hemispheres 69.6
1990 Female, age 91, right hemisphere 65.1
2692 Male, age 74, both hemispheres 54.0
2018 Male, age 76, both hemispheres 44.5
2622 Female, age 67, right hemisphere 44.3
2532 Female, age 72, left hemisphere 41.2
Perirhinal gyrus
nTPM: 90.6
2848 Male, age 76, right hemisphere 103.0
1847 Female, age 91, left hemisphere 93.0
1841 Female, age 85, right hemisphere 91.5
1794 Male, age 80, right hemisphere 83.9
2521 Female, age 94, right hemisphere 81.8
Subiculum
nTPM: 59.4
1977 Female, age 85, both hemispheres 72.9
2729 Female, age 91, right hemisphere 65.6
2438 Female, age 94, left hemisphere 60.0
2619 Male, age 74, both hemispheres 55.1
1901 Male, age 80, both hemispheres 54.0
2042 Male, age 76, both hemispheres 49.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 98.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 98.1
Samples: 197

Max nTPM: 282.0
Min nTPM: 23.8
Std nTPM: 40.2
Median nTPM: 90.4
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 282.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 242.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 210.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 206.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 188.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 173.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 173.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 172.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 172.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 163.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 162.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 137.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 137.1
FF:10153-102I9 76 years, female 168.4
FF:10169-103B7 60 years, female 105.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 438.3
Pig sample Sample description nTPM
Subiculum
nTPM: 438.4
Samples: 4

Max nTPM: 562.1
Min nTPM: 323.1
Sample A Female 562.1
Sample B Female 459.2
Sample C Male 409.0
Sample D Male 323.1
Dorsal hippocampus
nTPM: 390.8
Samples: 4

Max nTPM: 531.0
Min nTPM: 296.0
Sample A Female 424.0
Sample B Female 312.2
Sample C Male 531.0
Sample D Male 296.0
Entorhinal cortex
nTPM: 311.0
Samples: 4

Max nTPM: 379.9
Min nTPM: 198.0
Sample A Female 303.7
Sample B Female 362.3
Sample C Male 379.9
Sample D Male 198.0
Ventral hippocampus
nTPM: 376.5
Samples: 4

Max nTPM: 455.9
Min nTPM: 248.6
Sample A Female 441.3
Sample B Female 455.9
Sample C Male 360.1
Sample D Male 248.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 100.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 100.7
Samples: 4

Max nTPM: 114.2
Min nTPM: 89.0
Sample A Male 96.1
Sample B Male 89.0
Sample C Female 103.5
Sample D Female 114.2
Hippocampal formation
nTPM: 98.1
Samples: 4

Max nTPM: 143.4
Min nTPM: 66.9
Sample A Male 143.4
Sample B Male 99.2
Sample C Female 66.9
Sample D Female 82.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
72104184 Antisense, RP_051017_03_G06, Mouse strain C57BL/6J (56 days, male) 0.9
68844373 Antisense, RP_050222_01_E03, Mouse strain C57BL/6J (56 days, male) 0.5

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