HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:60.6 nTPM
HPA Brain:78.8 nTPM
GTEx:60.6 nTPM
FANTOM5:74.0 Scaled Tags Per Million
Pig:56.1 nTPM
Mouse:74.6 nTPM
Allen mouse:8.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042295
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 78.8
Sample id Sample description nTPM
Hippocampus
nTPM: 74.9
2621 Female, age 67, right hemisphere 83.1
1855 Male, age 76, left hemisphere 81.8
1898 Male, age 80, left hemisphere 79.9
2529 Female, age 94, left hemisphere 75.4
2148 Female, age 91, left hemisphere 69.4
1911 Female, age 85, right hemisphere 59.7
Dentate gyrus
nTPM: 75.0
2530 Female, age 94, left hemisphere 99.4
2010 Male, age 76, both hemispheres 76.3
2246 Female, age 85, both hemispheres 72.6
1927 Female, age 91, both hemispheres 70.2
2531 Female, age 67, both hemispheres 67.4
2528 Male, age 74, both hemispheres 64.2
Entorhinal gyrus
nTPM: 78.8
2613 Female, age 94, left hemisphere 92.6
2764 Male, age 80, right hemisphere 78.6
1938 Female, age 85, left hemisphere 76.1
2686 Male, age 75, right hemisphere 76.0
2117 Female, age 91, right hemisphere 75.2
1787 Male, age 76, left hemisphere 74.2
Hippocampus, CA1
nTPM: 71.7
2749 Male, age 80, left hemisphere 90.4
2082 Female, age 91, right hemisphere 69.4
2527 Male, age 74, both hemispheres 67.8
1873 Female, age 85, both hemispheres 65.5
2045 Male, age 76, both hemispheres 65.2
Hippocampus, CA2
nTPM: 74.1
2437 Female, age 94, left hemisphere 85.0
1963 Male, age 80, left hemisphere 83.1
2249 Male, age 74, both hemispheres 74.3
1940 Female, age 85, left hemisphere 69.2
1892 Male, age 76, both hemispheres 68.9
2113 Female, age 91, right hemisphere 64.2
Hippocampus, CA3
nTPM: 77.1
2436 Male, age 74, both hemispheres 100.9
2137 Male, age 80, left hemisphere 87.9
2861 Female, age 67, both hemispheres 87.6
1867 Male, age 76, both hemispheres 71.4
2620 Female, age 94, left hemisphere 58.5
1891 Female, age 85, both hemispheres 56.0
Parahippocampal cortex
nTPM: 76.7
2245 Female, age 91, both hemispheres 84.9
2532 Female, age 72, left hemisphere 83.0
2622 Female, age 67, right hemisphere 82.0
2250 Female, age 67, right hemisphere 81.1
1850 Male, age 80, both hemispheres 78.5
1933 Female, age 85, both hemispheres 73.6
1990 Female, age 91, right hemisphere 72.6
2693 Female, age 94, both hemispheres 71.6
2692 Male, age 74, both hemispheres 71.5
2018 Male, age 76, both hemispheres 68.2
Perirhinal gyrus
nTPM: 77.6
1847 Female, age 91, left hemisphere 84.6
1794 Male, age 80, right hemisphere 84.4
2521 Female, age 94, right hemisphere 80.5
1841 Female, age 85, right hemisphere 77.3
2848 Male, age 76, right hemisphere 61.3
Subiculum
nTPM: 68.1
2619 Male, age 74, both hemispheres 73.3
1977 Female, age 85, both hemispheres 71.9
2042 Male, age 76, both hemispheres 69.3
1901 Male, age 80, both hemispheres 67.5
2729 Female, age 91, right hemisphere 65.3
2438 Female, age 94, left hemisphere 61.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 60.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.6
Samples: 197

Max nTPM: 141.6
Min nTPM: 27.5
Std nTPM: 16.5
Median nTPM: 58.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 141.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 114.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 107.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 105.9
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 99.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 99.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 97.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 97.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 95.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 95.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 94.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 74.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.0
FF:10169-103B7 60 years, female 76.8
FF:10153-102I9 76 years, female 71.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 56.1
Pig sample Sample description nTPM
Subiculum
nTPM: 55.2
Samples: 4

Max nTPM: 70.9
Min nTPM: 48.8
Sample A Female 70.9
Sample B Female 48.8
Sample C Male 48.8
Sample D Male 52.3
Dorsal hippocampus
nTPM: 49.5
Samples: 4

Max nTPM: 63.5
Min nTPM: 34.7
Sample A Female 63.5
Sample B Female 43.2
Sample C Male 56.6
Sample D Male 34.7
Entorhinal cortex
nTPM: 56.1
Samples: 4

Max nTPM: 61.8
Min nTPM: 47.4
Sample A Female 59.5
Sample B Female 55.5
Sample C Male 61.8
Sample D Male 47.4
Ventral hippocampus
nTPM: 47.8
Samples: 4

Max nTPM: 60.4
Min nTPM: 34.9
Sample A Female 46.6
Sample B Female 34.9
Sample C Male 60.4
Sample D Male 49.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 74.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.6
Samples: 4

Max nTPM: 77.7
Min nTPM: 68.4
Sample A Male 77.7
Sample B Male 75.6
Sample C Female 68.4
Sample D Female 76.6
Hippocampal formation
nTPM: 54.2
Samples: 4

Max nTPM: 58.6
Min nTPM: 51.1
Sample A Male 52.7
Sample B Male 54.2
Sample C Female 51.1
Sample D Female 58.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.8
512998 Antisense, RP_040809_02_G07, Mouse strain C57BL/6J (56 days, male) 13.1
81599650 Antisense, RP_071213_01_A06, Mouse strain C57BL/6J (56 days, male) 4.5

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