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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
71.6
nTPM
HPA Brain:
86.5
nTPM
GTEx:
71.6
nTPM
FANTOM5:
94.2
Scaled Tags Per Million
Pig:
47.0
nTPM
Mouse:
70.4
nTPM
Allen mouse:
8.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
86.5
Sample id
Sample description
nTPM
Amygdala nTPM: 74.7
1987
Female, age 91, left hemisphere
78.6
2517
Female, age 94, left hemisphere
78.6
2695
Female, age 67, right hemisphere
77.9
2814
Male, age 76, right hemisphere
74.2
2514
Male, age 75, right hemisphere
64.3
Basal amygdala nTPM: 80.7
2243
Female, age 91, right hemisphere
89.6
2827
Female, age 67, right hemisphere
83.7
2685
Female, age 94, left hemisphere
83.6
2110
Male, age 80, left hemisphere
81.6
2609
Male, age 75, right hemisphere
76.9
1955
Male, age 76, both hemispheres
69.1
Central amygdala nTPM: 86.5
2826
Female, age 94, left hemisphere
111.7
2239
Male, age 80, left hemisphere
91.6
2515
Male, age 75, right hemisphere
89.5
2701
Female, age 91, right hemisphere
74.8
1905
Male, age 76, both hemispheres
65.0
Corticomedial amygdala nTPM: 75.7
2829
Male, age 80, left hemisphere
86.8
2242
Female, age 91, right hemisphere
83.6
2428
Male, age 75, right hemisphere
74.3
2535
Female, age 67, right hemisphere
74.2
2429
Female, age 94, left hemisphere
72.4
2240
Male, age 76, both hemispheres
62.7
Lateral amygdala nTPM: 84.3
2534
Female, age 94, left hemisphere
103.4
2256
Male, age 80, left hemisphere
91.3
2830
Female, age 67, right hemisphere
90.4
2255
Female, age 91, right hemisphere
82.0
2516
Male, age 75, right hemisphere
70.8
1883
Male, age 76, both hemispheres
68.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
71.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 71.6
Samples: 152
Max nTPM: 169.7
Min nTPM: 38.4
Std nTPM: 16.6
Median nTPM: 70.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
169.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
119.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
119.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
111.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
105.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
101.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
93.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
93.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
93.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
93.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
92.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
91.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
91.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
90.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
90.1
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
88.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
88.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
88.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
87.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
87.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
84.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
84.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
83.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
83.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
83.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
83.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
83.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
82.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
82.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
82.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
82.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
81.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
81.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
81.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
80.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
80.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
80.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
79.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
79.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
79.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
79.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
79.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
79.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
78.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
78.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
78.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
78.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
77.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
77.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
77.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
77.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
77.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
76.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
76.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
76.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
75.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
75.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
75.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
75.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
75.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
74.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
74.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
74.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
74.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
73.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
73.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
73.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
73.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
73.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
72.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
72.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
72.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
72.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
71.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
71.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
71.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
70.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
70.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
70.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
69.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
69.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
69.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
69.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
68.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
68.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
68.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
68.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
68.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
68.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
67.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
67.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
67.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
67.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
67.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
66.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
66.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
66.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
66.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
66.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
65.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
65.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
65.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
64.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
64.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
62.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
61.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
61.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
61.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
61.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
60.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
60.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
60.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
60.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
59.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
59.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
59.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
59.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
59.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
59.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
58.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
58.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
57.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
57.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
56.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
56.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
56.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
56.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
55.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
55.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
55.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
55.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
54.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
54.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
54.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
54.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
53.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
52.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
52.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
52.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
51.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
51.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
51.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
49.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
49.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
49.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
47.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
47.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
45.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
44.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
42.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
42.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
38.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
70.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 70.4
Samples: 4
Max nTPM: 72.6
Min nTPM: 67.3
Sample A
Male
72.6
Sample B
Male
70.2
Sample C
Female
71.4
Sample D
Female
67.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.