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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCOLCE2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
17.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
9.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
9.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
7.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
6.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
5.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
2.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
2.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
1.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
1.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
1.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
1.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
1.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
1.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCOLCE2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
131.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
117.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
102.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
101.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
97.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
95.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
90.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
86.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
86.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
85.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
85.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
84.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
82.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
81.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
76.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
72.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
71.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
69.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
69.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
67.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
67.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
67.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
65.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
64.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
64.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
61.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
59.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
59.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
58.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
58.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
55.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
54.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
53.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
53.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
52.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
52.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
51.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
50.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
48.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
48.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
46.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
46.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
45.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
45.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
44.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
43.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
43.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
43.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
42.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
40.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
40.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
39.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
39.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
39.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
39.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
39.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
39.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
39.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
38.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
38.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
38.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
38.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
37.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
37.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
37.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
37.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
36.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
36.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
36.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
36.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
36.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
35.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
35.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
35.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
35.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
34.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
34.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
33.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
33.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
33.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
33.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
33.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
33.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
32.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
32.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
32.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
32.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
32.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
32.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
31.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
31.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
31.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
30.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
30.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
30.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
30.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
30.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
30.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
30.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
30.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
29.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
29.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
29.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
29.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
29.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
28.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
28.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
27.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
27.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
27.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
27.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
27.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
26.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
26.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
26.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
26.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
25.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
25.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
25.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
24.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
24.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
24.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
23.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
23.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
23.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
23.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
23.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
23.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
23.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
23.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
22.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
22.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
22.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
22.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
22.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
21.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
21.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
21.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
21.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
21.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
21.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
21.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
21.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
21.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
21.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
21.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
20.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
20.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
20.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
20.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
20.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
20.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
20.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
19.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
19.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
19.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
19.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
19.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
19.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
19.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
18.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
18.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
18.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
18.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
18.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
18.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
18.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
18.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
17.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
17.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
17.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
17.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
17.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
17.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
16.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
16.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
16.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
16.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
16.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
15.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
15.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
15.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
15.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
15.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
15.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
15.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
15.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
15.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
14.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
14.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
14.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
14.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
14.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
14.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
14.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
14.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
14.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
14.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
14.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
14.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
14.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
14.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
13.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
13.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
13.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
13.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
13.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
13.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
13.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
13.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
12.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
12.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
12.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
12.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
12.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
12.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
12.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
12.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
11.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
11.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
11.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
11.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
11.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
10.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
10.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
10.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
10.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
10.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
10.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
10.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
10.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
10.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
9.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
9.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
9.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
9.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
9.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
9.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
9.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
9.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
9.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
9.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
9.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
9.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
8.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
8.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
8.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
8.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
8.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
8.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
8.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
8.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
8.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
8.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
8.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
8.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
8.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
8.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
8.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
8.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
8.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
8.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
8.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
8.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
8.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
8.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
7.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
7.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
7.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
7.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
7.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
7.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
7.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
7.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
7.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
6.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
6.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
6.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
6.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
6.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
6.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
6.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
6.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
6.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
6.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
6.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
5.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
5.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
5.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
5.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
5.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
5.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
5.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
5.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
5.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
5.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
5.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
5.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
5.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
5.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
5.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
5.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
4.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
4.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
4.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
4.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
4.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
4.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
4.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
4.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
4.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
4.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
4.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
4.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
4.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
4.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
4.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
4.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
4.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
4.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
4.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
4.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
4.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
4.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
4.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
4.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
4.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
3.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
3.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
3.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
3.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
3.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
3.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
3.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
3.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
3.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
3.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
3.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
3.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
3.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
3.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
3.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
3.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
3.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
3.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
3.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
3.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
3.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
3.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
3.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
3.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
3.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
3.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
3.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
2.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
2.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
2.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
2.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
2.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
2.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
2.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
2.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
2.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
2.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
2.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
2.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
2.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
2.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
2.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
2.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
2.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
2.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
2.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
2.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
2.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
2.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
2.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
2.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
2.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
2.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
1.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
1.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
1.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
1.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
1.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
1.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
1.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
1.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
1.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
1.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
1.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
1.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
1.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
1.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
1.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
1.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
1.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
1.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
1.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
1.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
1.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
1.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
1.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
1.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
1.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
1.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
1.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
1.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
1.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
1.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
1.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
1.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
1.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
1.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
1.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
1.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
1.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
0.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
0.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
0.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
0.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
0.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
0.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
0.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
0.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
0.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
0.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
0.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
0.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
0.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
0.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
0.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
0.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
0.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
0.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
0.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
0.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
0.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
0.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
0.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
0.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
0.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
0.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
0.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
0.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
0.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
0.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
0.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
0.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
0.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
0.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
0.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
0.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
0.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
0.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
0.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
0.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
0.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
0.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
0.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCOLCE2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
162.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
100.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
84.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
79.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
72.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
67.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
65.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
63.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
62.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
60.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
56.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
55.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
52.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
47.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
46.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
46.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
45.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
44.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
44.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
41.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
41.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
41.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
40.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
39.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
37.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
37.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
35.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
34.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
32.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
32.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
29.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
24.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
24.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
21.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
20.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
19.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
18.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
18.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
15.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
15.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
15.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
15.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
14.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
14.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
12.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
12.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
12.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
12.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
11.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
11.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
11.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
10.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
9.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
9.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
9.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
9.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
7.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
7.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
6.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
6.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
6.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
5.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
5.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
5.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
4.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
4.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
4.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
4.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
4.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
3.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
3.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
3.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
3.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
3.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
3.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
2.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
2.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
2.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
2.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
2.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
2.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
1.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
1.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
1.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
1.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
1.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
1.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
1.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
0.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
0.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
0.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
0.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
0.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCOLCE2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
37.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
28.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
21.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
15.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
14.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
12.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
11.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
10.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
9.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
9.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
8.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
8.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
7.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
7.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
7.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
6.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
5.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
4.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
4.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
4.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
4.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
4.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
3.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
3.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
3.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
3.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
3.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
3.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
3.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
3.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
3.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
3.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
3.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
3.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
2.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
2.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
2.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
2.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
2.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
2.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
2.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
2.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
2.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
2.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
2.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
2.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
2.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
2.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
2.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
2.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
2.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
2.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
2.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
2.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
1.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
1.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
1.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
1.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
1.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
1.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
1.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
1.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
1.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
1.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
1.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
1.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
1.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
1.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
1.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
1.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
1.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
1.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
1.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
1.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
1.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
1.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
1.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
1.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
1.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
1.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
1.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
1.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
1.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
1.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
1.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
1.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
1.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
1.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
1.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
1.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
1.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
1.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
0.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
0.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
0.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
0.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
0.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
0.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
0.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
0.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
0.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
0.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
0.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
0.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
0.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
0.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
0.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
0.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
0.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
0.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
0.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
0.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
0.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
0.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
0.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
0.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
0.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
0.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
0.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
0.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
0.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
0.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
0.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
0.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
0.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
0.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
0.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
0.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
0.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
0.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
0.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
0.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
0.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
0.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
0.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
0.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
0.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
0.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
0.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
0.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
0.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
0.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
0.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
0.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
0.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
0.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
0.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
0.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
0.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
0.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
0.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
0.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
0.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
0.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
0.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
0.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
0.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
0.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
0.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
0.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
0.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
0.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
0.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
0.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
0.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
0.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
0.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
0.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
0.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
0.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
0.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
0.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
0.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
0.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
0.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
0.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
0.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
0.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
0.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
0.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
0.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
0.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
0.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
0.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
0.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
0.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
3.1
CPT0084560003
Tumor
3.0
CPT0081880003
Tumor
2.7
CPT0063630003
Tumor
2.3
CPT0092800003
Normal
2.1
CPT0001340003
Tumor
2.0
CPT0007860003
Tumor
1.7
CPT0012180003
Tumor
1.6
CPT0092790003
Tumor
1.4
CPT0001510001
Normal
1.2
CPT0017410003
Tumor
1.2
CPT0013790003
Normal
1.1
CPT0065810003
Tumor
1.0
CPT0023350003
Tumor
0.9
CPT0086370003
Normal
0.9
CPT0065820001
Normal
0.9
CPT0079410003
Tumor
0.7
CPT0026420001
Normal
0.7
CPT0011240003
Tumor
0.6
CPT0071150004
Tumor
0.6
CPT0001500009
Tumor
0.5
CPT0012290003
Normal
0.5
CPT0065870003
Tumor
0.4
CPT0014160003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0066480003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0001540009
Tumor
0.3
CPT0012920003
Normal
0.3
CPT0009020003
Normal
0.2
CPT0019990003
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0012090003
Normal
0.2
CPT0012570003
Normal
0.2
CPT0012770003
Normal
0.2
CPT0077310003
Tumor
0.2
CPT0009000003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0077320001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0024680001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0006440003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0012900004
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0065750003
Tumor
-0.1
CPT0006530001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0012550003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0065690003
Tumor
-0.2
CPT0000780007
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0020130001
Normal
-0.3
CPT0017850003
Tumor
-0.3
CPT0025050003
Tumor
-0.3
CPT0079230003
Tumor
-0.3
CPT0077110003
Tumor
-0.3
CPT0084590001
Normal
-0.3
CPT0086030003
Tumor
-0.3
CPT0021240003
Tumor
-0.3
CPT0075130003
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0020020001
Normal
-0.4
CPT0078670001
Normal
-0.4
CPT0088780001
Normal
-0.4
CPT0014130001
Normal
-0.4
CPT0025290003
Tumor
-0.4
CPT0075170001
Normal
-0.5
CPT0012640003
Normal
-0.5
CPT0020120003
Tumor
-0.5
CPT0015810003
Tumor
-0.5
CPT0012370003
Tumor
-0.6
CPT0087050003
Normal
-0.6
CPT0079430001
Normal
-0.6
CPT0025350003
Tumor
-0.6
CPT0025170003
Tumor
-0.6
CPT0025230003
Tumor
-0.6
CPT0088760003
Tumor
-0.6
CPT0015730003
Tumor
-0.6
CPT0078660003
Tumor
-0.7
CPT0017450001
Normal
-0.7
CPT0078800003
Tumor
-0.7
CPT0079180003
Tumor
-0.7
CPT0026410003
Tumor
-0.8
CPT0001220008
Tumor
-0.8
CPT0007470001
Normal
-0.8
CPT0086820003
Tumor
-0.8
CPT0001230001
Normal
-0.9
CPT0001550001
Normal
-0.9
CPT0011410003
Tumor
-1.0
CPT0065450001
Normal
-1.0
CPT0012280003
Tumor
-1.0
CPT0000790001
Normal
-1.0
CPT0007320003
Tumor
-1.0
CPT0088970003
Tumor
-1.0
CPT0012670003
Tumor
-1.1
CPT0024670003
Tumor
-1.2
CPT0087040003
Tumor
-1.3
CPT0002270011
Tumor
-1.5
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0092190003
Normal
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0089040001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0082010001
Normal
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0077490003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0079000001
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0089480003
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077500001
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0089460004
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0075560003
Tumor
N/A
CPT0079510001
Normal
N/A
CPT0078990003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0000640003
Tumor
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0023690003
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0000890001
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0000660001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
