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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGFBP7 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
334.1
Number of samples
349
Samples
Sample
Description
TPM
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
1538.6
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
1382.5
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
1299.0
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
1263.2
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
1218.1
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
1199.4
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
1035.4
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1026.2
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
936.8
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
935.5
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
926.5
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
892.8
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
869.6
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
859.9
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
849.3
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
826.9
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
820.0
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
798.3
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
781.6
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
765.0
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
762.0
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
742.6
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
729.0
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
728.3
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
727.2
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
715.4
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
689.1
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
676.7
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
654.3
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
648.9
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
647.2
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
634.2
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
623.0
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
612.9
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
608.4
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
603.4
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
599.1
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
591.2
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
582.1
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
577.2
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
573.0
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
567.1
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
566.0
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
555.1
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
554.9
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
550.3
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
541.1
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
530.4
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
524.0
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
522.9
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
511.0
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
499.7
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
499.2
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
494.0
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
489.1
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
485.0
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
484.5
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
480.9
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
478.9
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
478.6
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
475.6
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
471.1
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
463.0
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
460.0
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
459.4
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
455.6
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
451.8
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
451.0
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
450.7
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
448.4
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
444.4
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
441.0
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
440.4
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
439.8
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
437.2
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
431.5
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
431.3
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
430.7
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
430.1
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
427.9
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
426.3
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
425.0
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
412.4
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
411.5
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
411.1
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
406.2
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
404.3
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
402.4
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
402.3
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
400.8
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
399.3
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
396.0
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
395.8
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
392.9
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
392.7
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
390.6
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
389.3
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
388.6
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
386.7
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
386.4
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
386.2
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
385.2
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
384.7
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
384.6
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
379.7
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
379.6
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
376.5
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
370.5
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
369.9
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
368.5
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
366.6
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
366.2
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
365.9
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
364.5
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
362.3
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
361.9
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
361.0
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
361.0
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
358.8
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
355.1
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
352.8
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
349.9
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
349.3
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
348.6
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
345.1
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
344.5
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
342.1
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
341.0
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
340.8
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
340.1
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
339.5
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
339.4
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
338.5
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
334.3
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
334.0
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
333.1
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
332.8
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
332.6
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
330.4
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
330.3
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
329.8
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
329.5
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
329.0
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
327.1
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
325.6
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
323.7
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
322.8
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
322.1
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
321.8
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
319.3
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
319.0
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
317.4
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
317.1
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
316.4
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
315.8
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
314.8
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
313.1
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
311.8
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
311.7
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
308.5
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
306.7
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
306.0
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
305.2
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
304.5
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
303.0
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
302.1
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
300.3
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
299.9
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
298.1
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
297.8
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
296.2
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
295.0
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
293.9
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
293.9
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
292.3
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
290.7
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
285.7
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
285.7
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
285.5
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
285.2
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
284.7
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
280.0
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
278.9
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
276.1
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
272.4
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
272.1
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
270.5
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
268.4
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
268.3
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
265.6
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
265.2
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
265.0
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
264.2
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
262.3
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
260.8
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
260.3
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
257.7
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
257.2
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
255.6
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
253.7
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
248.8
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
247.7
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
246.5
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
245.9
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
245.8
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
242.7
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
239.1
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
237.0
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
234.1
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
229.9
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
229.9
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
229.3
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
227.1
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
226.1
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
225.9
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
224.9
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
224.6
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
223.8
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
222.5
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
222.1
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
220.7
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
219.8
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
218.7
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
217.4
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
215.8
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
215.3
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
213.2
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
212.9
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
212.5
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
212.2
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
209.9
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
208.9
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
208.7
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
208.1
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
207.8
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
205.9
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
204.6
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
204.5
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
203.2
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
202.4
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
200.0
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
199.3
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
198.7
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
191.8
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
190.4
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
189.6
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
189.3
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
189.0
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
187.8
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
183.8
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
183.6
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
182.6
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
182.3
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
182.0
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
181.5
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
180.5
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
180.0
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
179.3
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
177.7
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
177.6
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
176.8
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
176.5
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
174.7
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
173.8
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
172.6
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
172.2
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
171.7
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
171.2
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
169.4
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
168.9
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
168.5
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
167.9
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
167.8
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
167.5
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
167.1
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
166.5
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
165.8
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
164.0
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
161.2
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
161.1
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
160.5
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
158.8
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
156.2
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
155.9
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
154.0
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
153.1
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
152.9
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
152.7
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
152.2
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
151.4
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
150.4
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
150.1
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
149.5
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
147.4
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
146.4
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
146.1
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
145.7
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
144.8
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
142.9
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
142.8
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
142.1
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
138.3
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
136.5
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
134.9
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
134.0
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
133.9
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
132.6
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
128.1
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
128.0
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
126.1
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
124.3
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
123.0
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
122.2
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
121.8
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
120.7
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
120.7
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
118.6
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
116.7
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
113.7
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
112.0
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
110.7
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
110.3
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
109.8
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
107.0
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
106.6
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
104.2
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
102.9
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
102.6
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
100.6
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
100.5
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
94.6
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
93.2
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
92.5
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
90.9
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
90.8
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
83.7
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
81.8
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
79.9
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
76.3
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
75.8
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
74.6
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
72.4
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
69.6
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
69.0
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
67.4
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
64.2
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
57.8
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
39.8
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGFBP7 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
234.0
Number of samples
81
Samples
Sample
Description
TPM
DO46376
0 years, female, NA, stage:III, dead, 1430 days
947.8
DO46508
0 years, female, NA, stage:III, dead, 2101 days
627.8
DO46443
0 years, female, NA, stage:III, dead, 2464 days
560.3
DO46344
0 years, female, NA, stage:III, dead, 642 days
544.5
DO46398
0 years, female, NA, stage:III, alive, 437 days
531.2
DO46388
0 years, female, NA, stage:III, dead, 413 days
497.8
DO46453
0 years, female, NA, stage:III, dead, 3294 days
481.9
DO46340
0 years, female, NA, stage:III, dead, 616 days
422.4
DO46338
0 years, female, NA, stage:III, dead, 596 days
417.1
DO46358
0 years, female, NA, stage:III, dead, 423 days
411.2
DO46332
0 years, female, NA, stage:III, dead, 689 days
396.6
DO46551
0 years, female, NA, stage:III, dead, 1055 days
360.6
DO46448
0 years, female, NA, stage:III, dead, 654 days
352.9
DO46571
0 years, female, NA, stage:III, dead, 243 days
350.5
DO46348
0 years, female, NA, stage:IV, dead, 287 days
349.1
DO46382
0 years, female, NA, stage:IV, dead, 311 days
346.9
DO46560
0 years, female, NA, stage:IV, dead, 286 days
335.2
DO46364
0 years, female, NA, stage:III, dead, 806 days
323.7
DO46329
0 years, female, NA, stage:III, dead, 1699 days
317.8
DO46334
0 years, female, NA, stage:III, dead, 496 days
315.4
DO46402
0 years, female, NA, stage:III, dead, 511 days
308.1
DO46326
0 years, female, NA, stage:III, dead, 701 days
306.0
DO46602
0 years, female, NA, stage:III, dead, 205 days
301.0
DO46392
0 years, female, NA, stage:III, dead, 628 days
300.2
DO46528
0 years, female, NA, stage:III, alive, 6139 days
295.3
DO46368
0 years, female, NA, stage:III, dead, 2879 days
284.9
DO46330
0 years, female, NA, stage:III, dead, 684 days
283.6
DO46370
0 years, female, NA, stage:III, dead, 1727 days
277.3
DO46372
0 years, female, NA, stage:III, dead, 1326 days
269.0
DO46493
0 years, female, NA, stage:IV, alive, 839 days
259.0
DO46380
0 years, female, NA, stage:III, dead, 1423 days
258.1
DO46412
0 years, female, NA, stage:III, dead, 597 days
255.1
DO46463
0 years, female, NA, stage:III, dead, 2451 days
254.2
DO46432
0 years, female, NA, stage:III, alive, 2218 days
245.9
DO46533
0 years, female, NA, stage:III, alive, 3667 days
240.2
DO46350
0 years, female, NA, stage:III, dead, 886 days
239.2
DO46346
0 years, female, NA, stage:III, dead, 1187 days
238.0
DO46588
0 years, female, NA, stage:III, dead, 438 days
229.0
DO46325
0 years, female, NA, stage:III, dead, 477 days
226.5
DO46606
0 years, female, NA, stage:III, alive, 804 days
219.6
DO46597
0 years, female, NA, stage:III, dead, 393 days
217.8
DO46354
0 years, female, NA, stage:III, dead, 843 days
213.4
DO46386
0 years, female, NA, stage:III, dead, 1162 days
210.0
DO46342
0 years, female, NA, stage:III, dead, 1398 days
208.8
DO46327
0 years, female, NA, stage:III, dead, 184 days
202.6
DO46336
0 years, female, NA, stage:IV, dead, 664 days
176.4
DO46468
0 years, female, NA, stage:III, alive, 2776 days
173.1
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
169.4
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
168.4
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
164.9
DO46374
0 years, female, NA, stage:III, dead, 1409 days
155.7
DO46436
0 years, female, NA, stage:III, alive, 3193 days
146.4
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
145.4
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
145.2
DO46586
0 years, female, NA, stage:III, dead, 1019 days
142.2
DO46352
0 years, female, NA, stage:III, dead, 677 days
138.2
DO46378
0 years, female, NA, stage:III, alive, 843 days
137.3
DO46568
0 years, female, NA, stage:III, dead, 320 days
134.6
DO46561
0 years, female, NA, stage:III, dead, 195 days
134.5
DO46591
0 years, female, NA, stage:III, dead, 195 days
126.0
DO46408
0 years, female, NA, stage:III, dead, 489 days
125.1
DO46362
0 years, female, NA, stage:III, dead, 1639 days
123.8
DO46328
0 years, female, NA, stage:III, dead, 972 days
115.3
DO46566
0 years, female, NA, stage:III, dead, 673 days
108.0
DO46384
0 years, female, NA, stage:III, dead, 614 days
107.9
DO46518
0 years, female, NA, stage:III, alive, 2960 days
102.7
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
88.2
DO46400
0 years, female, NA, stage:III, dead, 719 days
83.0
DO46404
0 years, female, NA, stage:III, dead, 690 days
80.7
DO46390
0 years, female, NA, stage:III, dead, 374 days
77.8
DO46396
0 years, female, NA, stage:III, dead, 583 days
74.6
DO46333
0 years, female, NA, stage:III, dead, 359 days
71.8
DO46538
0 years, female, NA, stage:III, dead, 1527 days
69.8
DO46581
0 years, female, NA, stage:III, dead, 408 days
63.6
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
54.6
DO46356
0 years, female, NA, stage:III, dead, 911 days
34.8
DO46576
0 years, female, NA, stage:III, alive, 133 days
28.3
DO46546
0 years, female, NA, stage:III, dead, 1889 days
20.9
DO46366
0 years, female, NA, stage:III, dead, 2054 days
11.3
DO46331
0 years, female, NA, stage:III, dead, 612 days
11.2
DO46611
0 years, female, NA, stage:III, dead, 734 days
10.2
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
1.4
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
1.2
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
1.0
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
1.0
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
0.9
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
0.9
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.8
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
0.7
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
0.7
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
0.6
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.6
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
0.6
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.5
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.5
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.5
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
0.5
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.5
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
0.4
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
0.4
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
0.4
15524912-685a-47ce-a824-567848_D2
Tumor
0.3
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.3
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
0.3
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
0.2
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.2
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.2
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
0.2
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.2
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
0.2
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.2
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.1
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.1
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
0.0
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
0.0
340a3769-3031-41ae-bb08-a2f696_D2
Normal
0.0
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
0.0
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.0
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.0
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.0
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.0
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
0.0
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-0.1
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.1
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
-0.1
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-0.1
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-0.1
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
-0.1
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
-0.2
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.2
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
-0.2
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-0.2
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-0.2
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
-0.2
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-0.2
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.2
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-0.3
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.3
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-0.3
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
-0.3
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-0.3
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-0.3
e9d416e7-f661-400a-896e-388545_D2
Tumor
-0.3
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-0.3
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.3
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
-0.3
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.4
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
-0.4
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
-0.4
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-0.4
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.4
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-0.4
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
-0.5
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.5
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-0.5
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.5
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.5
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.5
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.6
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
-0.6
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-0.6
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-0.7
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.7
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-0.7
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-0.7
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.7
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.8
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-0.8
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-0.8
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
-0.8
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.9
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-0.9
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-0.9
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
-0.9
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-0.9
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
-0.9
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.9
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.9
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.9
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-1.0
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
-1.0
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-1.1
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-1.2
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-1.2
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-1.2
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
-1.3
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-1.5
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-1.6
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-1.7
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OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.