HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:151.4 nTPM
HPA Brain:194.7 nTPM
GTEx:151.4 nTPM
FANTOM5:371.9 Scaled Tags Per Million
Pig:87.7 nTPM
Mouse:28.8 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002196Antibody CAB020668
Glial cells Not detectedNot detected
Neuronal cells LowNot detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 194.7
Sample id Sample description nTPM
Hippocampus
nTPM: 119.3
1855 Male, age 76, left hemisphere 136.6
2529 Female, age 94, left hemisphere 130.3
1911 Female, age 85, right hemisphere 118.9
1898 Male, age 80, left hemisphere 114.0
2621 Female, age 67, right hemisphere 108.9
2148 Female, age 91, left hemisphere 107.0
Dentate gyrus
nTPM: 104.6
2530 Female, age 94, left hemisphere 136.8
2010 Male, age 76, both hemispheres 128.7
2528 Male, age 74, both hemispheres 109.5
1927 Female, age 91, both hemispheres 84.8
2246 Female, age 85, both hemispheres 83.9
2531 Female, age 67, both hemispheres 83.8
Entorhinal gyrus
nTPM: 96.1
2117 Female, age 91, right hemisphere 153.5
2686 Male, age 75, right hemisphere 102.8
1787 Male, age 76, left hemisphere 99.7
2764 Male, age 80, right hemisphere 81.3
1938 Female, age 85, left hemisphere 78.3
2613 Female, age 94, left hemisphere 60.9
Hippocampus, CA1
nTPM: 100.4
2527 Male, age 74, both hemispheres 121.4
2045 Male, age 76, both hemispheres 104.7
2082 Female, age 91, right hemisphere 96.9
1873 Female, age 85, both hemispheres 89.9
2749 Male, age 80, left hemisphere 88.9
Hippocampus, CA2
nTPM: 143.9
2249 Male, age 74, both hemispheres 309.1
1963 Male, age 80, left hemisphere 120.2
2113 Female, age 91, right hemisphere 115.6
2437 Female, age 94, left hemisphere 115.2
1940 Female, age 85, left hemisphere 114.8
1892 Male, age 76, both hemispheres 88.4
Hippocampus, CA3
nTPM: 194.7
2436 Male, age 74, both hemispheres 694.3
1867 Male, age 76, both hemispheres 134.5
2861 Female, age 67, both hemispheres 95.2
2137 Male, age 80, left hemisphere 91.5
1891 Female, age 85, both hemispheres 88.4
2620 Female, age 94, left hemisphere 64.0
Parahippocampal cortex
nTPM: 90.1
2018 Male, age 76, both hemispheres 138.1
2245 Female, age 91, both hemispheres 96.6
2622 Female, age 67, right hemisphere 96.6
1990 Female, age 91, right hemisphere 96.1
2250 Female, age 67, right hemisphere 95.1
2532 Female, age 72, left hemisphere 84.0
2692 Male, age 74, both hemispheres 83.4
1850 Male, age 80, both hemispheres 76.2
1933 Female, age 85, both hemispheres 74.7
2693 Female, age 94, both hemispheres 59.8
Perirhinal gyrus
nTPM: 75.0
1794 Male, age 80, right hemisphere 91.9
1841 Female, age 85, right hemisphere 83.9
2521 Female, age 94, right hemisphere 80.1
2848 Male, age 76, right hemisphere 60.1
1847 Female, age 91, left hemisphere 59.1
Subiculum
nTPM: 109.5
2042 Male, age 76, both hemispheres 150.3
2729 Female, age 91, right hemisphere 112.5
2438 Female, age 94, left hemisphere 111.4
2619 Male, age 74, both hemispheres 104.0
1901 Male, age 80, both hemispheres 98.9
1977 Female, age 85, both hemispheres 79.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 151.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 151.4
Samples: 197

Max nTPM: 378.9
Min nTPM: 48.1
Std nTPM: 62.7
Median nTPM: 137.9
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 378.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 366.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 365.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 356.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 337.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 305.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 283.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 283.3
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 270.3
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 257.1
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 255.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 371.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 371.9
FF:10153-102I9 76 years, female 498.8
FF:10169-103B7 60 years, female 245.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 87.7
Pig sample Sample description nTPM
Subiculum
nTPM: 78.9
Samples: 4

Max nTPM: 90.1
Min nTPM: 53.0
Sample A Female 88.1
Sample B Female 53.0
Sample C Male 84.3
Sample D Male 90.1
Dorsal hippocampus
nTPM: 60.3
Samples: 4

Max nTPM: 73.0
Min nTPM: 47.0
Sample A Female 73.0
Sample B Female 59.8
Sample C Male 61.2
Sample D Male 47.0
Entorhinal cortex
nTPM: 85.6
Samples: 4

Max nTPM: 100.8
Min nTPM: 63.7
Sample A Female 93.7
Sample B Female 84.0
Sample C Male 100.8
Sample D Male 63.7
Ventral hippocampus
nTPM: 87.7
Samples: 4

Max nTPM: 144.4
Min nTPM: 57.9
Sample A Female 84.1
Sample B Female 64.4
Sample C Male 144.4
Sample D Male 57.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 28.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.8
Samples: 4

Max nTPM: 34.9
Min nTPM: 25.1
Sample A Male 29.3
Sample B Male 25.1
Sample C Female 34.9
Sample D Female 25.9
Hippocampal formation
nTPM: 28.8
Samples: 4

Max nTPM: 35.7
Min nTPM: 23.9
Sample A Male 23.9
Sample B Male 25.1
Sample C Female 30.4
Sample D Female 35.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
81654139 Antisense, RP_090205_01_B05, Mouse strain C57BL/6J (56 days, male) 3.5

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