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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
143.0
nTPM
HPA Brain:
124.9
nTPM
GTEx:
143.0
nTPM
FANTOM5:
232.4
Scaled Tags Per Million
Pig:
65.5
nTPM
Mouse:
27.9
nTPM
Allen mouse:
3.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
124.9
Sample id
Sample description
nTPM
Amygdala nTPM: 124.9
2695
Female, age 67, right hemisphere
163.1
2814
Male, age 76, right hemisphere
162.3
1987
Female, age 91, left hemisphere
125.3
2517
Female, age 94, left hemisphere
93.7
2514
Male, age 75, right hemisphere
79.9
Basal amygdala nTPM: 91.2
1955
Male, age 76, both hemispheres
131.1
2110
Male, age 80, left hemisphere
118.5
2827
Female, age 67, right hemisphere
104.9
2609
Male, age 75, right hemisphere
73.6
2685
Female, age 94, left hemisphere
60.6
2243
Female, age 91, right hemisphere
58.5
Central amygdala nTPM: 124.2
2826
Female, age 94, left hemisphere
170.2
2515
Male, age 75, right hemisphere
148.7
1905
Male, age 76, both hemispheres
133.6
2239
Male, age 80, left hemisphere
96.9
2701
Female, age 91, right hemisphere
71.4
Corticomedial amygdala nTPM: 78.2
2240
Male, age 76, both hemispheres
90.1
2428
Male, age 75, right hemisphere
83.0
2242
Female, age 91, right hemisphere
82.8
2829
Male, age 80, left hemisphere
82.8
2535
Female, age 67, right hemisphere
75.3
2429
Female, age 94, left hemisphere
55.3
Lateral amygdala nTPM: 118.8
1883
Male, age 76, both hemispheres
142.9
2830
Female, age 67, right hemisphere
134.7
2256
Male, age 80, left hemisphere
125.8
2534
Female, age 94, left hemisphere
121.6
2255
Female, age 91, right hemisphere
94.8
2516
Male, age 75, right hemisphere
92.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
143.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 143.0
Samples: 152
Max nTPM: 955.6
Min nTPM: 47.4
Std nTPM: 93.4
Median nTPM: 121.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
955.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
482.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
369.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
314.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
303.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
287.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
286.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
279.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
263.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
256.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
254.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
250.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
233.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
231.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
231.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
230.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
225.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
219.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
217.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
215.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
208.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
206.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
198.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
194.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
192.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
188.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
182.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
181.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
180.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
180.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
179.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
178.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
177.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
177.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
177.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
176.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
171.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
170.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
168.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
167.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
167.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
164.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
161.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
161.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
160.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
160.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
160.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
159.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
158.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
156.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
154.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
152.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
151.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
148.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
148.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
143.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
142.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
142.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
141.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
140.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
140.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
139.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
137.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
133.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
133.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
131.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
130.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
128.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
128.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
127.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
127.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
126.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
125.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
125.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
125.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
121.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
120.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
114.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
114.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
113.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
112.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
112.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
111.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
111.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
109.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
109.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
109.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
108.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
107.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
107.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
106.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
106.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
106.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
106.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
104.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
104.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
103.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
102.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
102.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
100.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
99.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
99.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
98.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
98.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
97.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
97.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
96.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
95.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
94.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
94.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
93.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
91.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
90.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
90.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
89.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
89.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
88.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
87.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
87.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
87.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
86.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
86.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
85.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
85.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
84.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
84.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
83.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
82.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
82.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
81.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
79.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
79.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
79.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
78.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
77.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
76.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
75.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
73.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
73.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
72.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
69.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
68.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
67.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
66.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
64.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
62.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
60.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
58.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
57.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
57.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
48.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
47.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
27.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 28.0
Samples: 4
Max nTPM: 39.9
Min nTPM: 19.9
Sample A
Male
22.8
Sample B
Male
19.9
Sample C
Female
39.9
Sample D
Female
29.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.