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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A11 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1612.8
Number of samples
349
Samples
Sample
Description
TPM
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
6993.4
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
5825.0
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
5469.2
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
5337.0
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
5326.4
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
5279.6
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
4895.6
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
4843.2
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
4805.2
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
4465.3
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
4255.8
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
4252.7
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
4193.1
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
4074.8
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
3886.8
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
3707.8
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
3689.4
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
3583.9
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
3542.5
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
3411.2
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
3384.8
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
3334.7
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
3241.0
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
3156.2
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
3140.5
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
3033.0
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
3031.4
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
3017.4
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
2978.1
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
2969.6
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
2939.8
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
2929.3
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
2866.3
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
2848.9
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
2817.5
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
2714.5
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
2711.9
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
2690.3
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
2671.0
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
2631.9
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
2628.1
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
2616.1
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
2607.3
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
2603.7
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
2597.8
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
2555.7
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
2463.6
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
2445.0
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
2444.8
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
2422.4
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
2416.9
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
2400.0
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
2382.7
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
2370.7
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
2364.1
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
2354.9
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
2348.1
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
2340.7
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
2338.4
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
2320.8
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
2317.8
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
2307.6
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
2305.6
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
2285.4
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
2279.6
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
2277.3
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
2270.1
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
2257.3
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
2242.8
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
2219.8
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
2217.2
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
2177.3
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
2173.3
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
2157.8
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
2133.2
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
2131.6
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
2126.4
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
2123.6
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
2122.0
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
2111.7
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
2095.4
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
2087.3
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
2079.4
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
2068.7
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
2064.0
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
2062.6
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
2056.7
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
2055.8
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
2053.4
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
2043.8
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
2039.2
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
2024.3
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
1992.2
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
1976.6
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
1954.6
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
1929.9
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
1923.6
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
1913.3
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
1901.2
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
1891.7
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
1890.3
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
1876.3
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
1863.8
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
1861.7
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
1856.4
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
1853.2
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
1797.2
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
1795.7
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
1795.1
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
1790.8
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
1789.7
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
1786.7
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
1786.0
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
1777.8
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
1762.5
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
1748.2
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
1748.1
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
1737.9
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
1737.6
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
1716.0
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
1705.5
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
1704.4
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
1703.6
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
1698.5
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
1693.7
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
1685.5
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
1681.9
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1677.8
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
1676.4
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
1671.4
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
1660.7
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
1658.0
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
1657.9
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
1654.9
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
1631.0
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
1628.6
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
1612.7
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
1605.7
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
1595.6
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
1593.6
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
1583.4
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
1575.5
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
1569.8
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
1555.5
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
1551.9
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
1546.0
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
1542.6
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
1540.0
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
1538.7
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
1533.9
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
1518.8
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
1515.7
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
1515.6
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
1514.7
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
1511.7
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
1493.9
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
1462.7
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
1460.8
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
1459.5
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
1455.5
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
1445.8
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
1428.2
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
1418.4
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
1405.1
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
1403.0
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
1402.1
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1398.2
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
1392.0
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
1380.7
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
1374.6
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
1372.8
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
1364.2
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1357.0
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
1353.7
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
1353.0
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
1352.1
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
1349.7
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
1343.4
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
1342.7
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
1334.5
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
1332.1
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
1328.5
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
1328.4
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
1325.8
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
1324.7
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
1323.7
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
1323.2
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
1313.1
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
1305.0
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
1301.9
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
1301.7
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
1301.5
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
1300.8
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
1297.8
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1294.6
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
1285.2
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
1279.8
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
1278.8
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
1277.9
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
1275.4
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
1265.6
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
1262.0
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
1254.8
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
1246.6
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1228.6
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
1224.6
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
1222.7
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
1214.5
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
1214.3
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
1210.9
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
1205.1
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
1202.8
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
1201.1
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
1192.2
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
1185.9
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
1184.4
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
1182.5
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1179.5
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
1179.2
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
1177.1
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
1164.1
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
1152.5
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
1151.8
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
1148.7
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
1142.5
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
1141.5
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
1137.8
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
1134.0
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
1131.0
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
1131.0
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
1130.9
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
1123.2
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1106.3
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
1097.9
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
1093.5
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
1093.2
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
1088.9
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
1088.5
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
1084.5
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
1078.4
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
1065.6
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
1049.0
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
1039.2
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
1027.7
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
1021.2
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
1020.7
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
1012.9
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
1010.8
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
1008.5
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
1001.4
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
999.1
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
991.9
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
991.6
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
987.2
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
972.7
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
971.3
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
970.1
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
969.5
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
961.0
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
960.2
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
942.4
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
938.9
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
929.5
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
927.9
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
927.9
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
919.3
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
917.7
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
907.2
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
907.1
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
901.0
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
899.5
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
887.5
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
883.3
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
877.4
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
875.4
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
874.7
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
863.2
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
861.0
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
856.7
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
853.8
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
850.3
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
845.3
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
843.9
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
839.7
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
833.5
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
825.2
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
818.4
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
802.6
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
800.8
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
786.6
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
783.8
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
768.8
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
766.8
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
755.2
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
752.3
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
749.9
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
745.6
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
739.3
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
734.9
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
730.4
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
728.3
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
721.3
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
717.8
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
703.8
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
698.2
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
691.0
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
683.2
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
675.8
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
648.5
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
646.9
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
619.8
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
617.4
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
613.6
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
611.7
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
606.4
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
575.1
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
569.1
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
568.8
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
565.7
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
557.8
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
554.0
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
549.6
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
548.3
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
545.4
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
535.6
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
510.7
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
503.5
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
495.9
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
492.0
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
464.4
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
457.9
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
456.1
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
455.7
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
446.3
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
429.6
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
424.4
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
421.7
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
408.8
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
400.0
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
396.1
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
392.0
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
383.5
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
367.1
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
365.3
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
349.9
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
296.0
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
141.8
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
80.4
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A11 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
770.8
Number of samples
81
Samples
Sample
Description
TPM
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
2131.1
DO46602
0 years, female, NA, stage:III, dead, 205 days
2044.4
DO46350
0 years, female, NA, stage:III, dead, 886 days
1712.7
DO46448
0 years, female, NA, stage:III, dead, 654 days
1687.4
DO46329
0 years, female, NA, stage:III, dead, 1699 days
1653.0
DO46376
0 years, female, NA, stage:III, dead, 1430 days
1623.8
DO46388
0 years, female, NA, stage:III, dead, 413 days
1399.1
DO46453
0 years, female, NA, stage:III, dead, 3294 days
1338.6
DO46333
0 years, female, NA, stage:III, dead, 359 days
1321.8
DO46382
0 years, female, NA, stage:IV, dead, 311 days
1307.4
DO46581
0 years, female, NA, stage:III, dead, 408 days
1281.2
DO46412
0 years, female, NA, stage:III, dead, 597 days
1216.2
DO46606
0 years, female, NA, stage:III, alive, 804 days
1150.1
DO46330
0 years, female, NA, stage:III, dead, 684 days
1139.3
DO46354
0 years, female, NA, stage:III, dead, 843 days
1106.5
DO46533
0 years, female, NA, stage:III, alive, 3667 days
1096.1
DO46326
0 years, female, NA, stage:III, dead, 701 days
1046.4
DO46597
0 years, female, NA, stage:III, dead, 393 days
1033.1
DO46380
0 years, female, NA, stage:III, dead, 1423 days
1027.0
DO46576
0 years, female, NA, stage:III, alive, 133 days
986.3
DO46331
0 years, female, NA, stage:III, dead, 612 days
938.6
DO46348
0 years, female, NA, stage:IV, dead, 287 days
911.9
DO46560
0 years, female, NA, stage:IV, dead, 286 days
907.6
DO46591
0 years, female, NA, stage:III, dead, 195 days
879.4
DO46327
0 years, female, NA, stage:III, dead, 184 days
876.4
DO46372
0 years, female, NA, stage:III, dead, 1326 days
862.3
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
859.5
DO46566
0 years, female, NA, stage:III, dead, 673 days
842.9
DO46508
0 years, female, NA, stage:III, dead, 2101 days
839.2
DO46404
0 years, female, NA, stage:III, dead, 690 days
819.6
DO46538
0 years, female, NA, stage:III, dead, 1527 days
814.6
DO46346
0 years, female, NA, stage:III, dead, 1187 days
806.6
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
802.9
DO46344
0 years, female, NA, stage:III, dead, 642 days
790.2
DO46432
0 years, female, NA, stage:III, alive, 2218 days
773.6
DO46571
0 years, female, NA, stage:III, dead, 243 days
763.2
DO46342
0 years, female, NA, stage:III, dead, 1398 days
759.0
DO46340
0 years, female, NA, stage:III, dead, 616 days
758.2
DO46528
0 years, female, NA, stage:III, alive, 6139 days
728.5
DO46408
0 years, female, NA, stage:III, dead, 489 days
717.8
DO46364
0 years, female, NA, stage:III, dead, 806 days
667.8
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
666.8
DO46374
0 years, female, NA, stage:III, dead, 1409 days
652.3
DO46352
0 years, female, NA, stage:III, dead, 677 days
644.9
DO46336
0 years, female, NA, stage:IV, dead, 664 days
641.4
DO46325
0 years, female, NA, stage:III, dead, 477 days
585.0
DO46334
0 years, female, NA, stage:III, dead, 496 days
579.7
DO46328
0 years, female, NA, stage:III, dead, 972 days
576.7
DO46332
0 years, female, NA, stage:III, dead, 689 days
559.0
DO46386
0 years, female, NA, stage:III, dead, 1162 days
556.7
DO46493
0 years, female, NA, stage:IV, alive, 839 days
541.0
DO46568
0 years, female, NA, stage:III, dead, 320 days
538.4
DO46390
0 years, female, NA, stage:III, dead, 374 days
522.9
DO46396
0 years, female, NA, stage:III, dead, 583 days
519.1
DO46378
0 years, female, NA, stage:III, alive, 843 days
513.8
DO46392
0 years, female, NA, stage:III, dead, 628 days
506.3
DO46366
0 years, female, NA, stage:III, dead, 2054 days
501.9
DO46400
0 years, female, NA, stage:III, dead, 719 days
497.9
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
495.8
DO46370
0 years, female, NA, stage:III, dead, 1727 days
487.9
DO46398
0 years, female, NA, stage:III, alive, 437 days
480.0
DO46402
0 years, female, NA, stage:III, dead, 511 days
468.1
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
437.3
DO46546
0 years, female, NA, stage:III, dead, 1889 days
435.2
DO46586
0 years, female, NA, stage:III, dead, 1019 days
429.4
DO46368
0 years, female, NA, stage:III, dead, 2879 days
417.1
DO46518
0 years, female, NA, stage:III, alive, 2960 days
413.2
DO46463
0 years, female, NA, stage:III, dead, 2451 days
408.1
DO46443
0 years, female, NA, stage:III, dead, 2464 days
400.2
DO46362
0 years, female, NA, stage:III, dead, 1639 days
377.2
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
368.0
DO46611
0 years, female, NA, stage:III, dead, 734 days
331.0
DO46384
0 years, female, NA, stage:III, dead, 614 days
324.6
DO46561
0 years, female, NA, stage:III, dead, 195 days
318.6
DO46436
0 years, female, NA, stage:III, alive, 3193 days
315.8
DO46468
0 years, female, NA, stage:III, alive, 2776 days
310.4
DO46338
0 years, female, NA, stage:III, dead, 596 days
304.2
DO46551
0 years, female, NA, stage:III, dead, 1055 days
303.3
DO46358
0 years, female, NA, stage:III, dead, 423 days
259.8
DO46588
0 years, female, NA, stage:III, dead, 438 days
193.4
DO46356
0 years, female, NA, stage:III, dead, 911 days
134.5
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
1.8
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
1.5
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
1.3
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
1.3
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
1.2
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
1.2
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
1.2
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
1.2
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
1.2
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
1.2
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
1.1
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
1.1
15524912-685a-47ce-a824-567848_D2
Tumor
1.1
285fed94-1495-448e-879b-b55de9_D2
Tumor
1.1
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
1.0
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
1.0
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
1.0
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
1.0
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
1.0
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
1.0
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.9
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.8
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.8
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
0.8
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.8
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.8
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.8
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.8
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.7
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
0.7
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.7
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
0.6
161317f3-1a39-438e-af45-cd2502_D2
Tumor
0.6
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
0.6
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.6
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.6
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.6
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.6
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.5
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.5
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
0.5
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
0.5
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.5
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
0.5
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
0.5
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.4
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.4
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.4
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
0.4
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.3
1a10c200-3895-4648-b951-94f99f_D2
Tumor
0.3
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
0.3
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.3
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.3
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
0.3
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
0.3
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.3
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.3
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
0.3
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
0.2
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.2
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
0.2
e9d416e7-f661-400a-896e-388545_D2
Tumor
0.2
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.2
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
0.2
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.2
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.2
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.1
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
0.1
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
0.0
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
0.0
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
0.0
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
0.0
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
0.0
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
0.0
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.1
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-0.1
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.1
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-0.1
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-0.1
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-0.1
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-0.1
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.2
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.2
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.2
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
-0.2
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.2
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-0.2
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-0.2
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.3
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.3
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.3
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-0.3
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.3
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.4
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.5
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-0.5
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.5
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.5
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.5
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-0.5
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-0.5
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
-0.6
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.7
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-0.7
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.7
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.8
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-0.8
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
