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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A11 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
202.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
2245.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
2217.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2157.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
2057.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1843.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
1820.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
1540.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1441.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
1421.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
1394.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1379.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
1312.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
1251.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
1206.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1176.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
1168.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
1052.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
1025.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
973.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
958.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
754.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
735.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
716.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
669.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
631.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
620.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
619.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
563.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
545.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
541.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
526.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
522.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
516.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
505.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
492.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
485.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
481.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
453.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
439.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
407.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
389.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
368.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
367.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
352.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
349.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
345.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
342.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
341.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
336.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
332.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
323.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
322.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
318.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
315.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
313.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
304.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
298.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
291.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
288.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
285.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
274.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
268.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
267.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
263.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
262.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
260.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
259.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
250.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
249.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
246.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
240.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
228.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
226.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
223.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
217.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
216.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
211.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
209.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
201.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
199.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
196.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
190.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
185.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
184.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
184.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
183.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
182.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
179.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
178.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
173.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
172.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
169.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
167.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
167.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
166.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
166.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
165.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
163.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
161.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
159.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
159.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
156.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
155.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
154.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
153.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
150.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
149.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
147.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
147.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
145.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
142.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
142.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
141.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
140.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
138.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
136.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
134.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
134.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
133.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
132.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
131.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
128.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
128.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
128.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
128.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
125.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
124.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
123.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
122.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
122.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
121.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
119.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
118.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
118.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
117.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
117.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
115.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
113.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
113.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
113.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
111.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
111.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
110.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
109.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
108.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
106.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
104.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
104.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
103.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
102.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
102.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
101.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
101.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
100.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
100.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
98.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
95.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
94.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
94.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
93.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
93.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
93.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
92.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
92.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
91.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
90.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
88.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
88.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
87.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
87.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
86.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
86.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
84.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
84.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
84.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
83.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
83.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
83.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
82.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
82.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
81.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
81.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
81.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
80.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
79.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
79.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
77.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
77.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
77.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
77.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
77.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
76.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
76.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
76.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
75.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
75.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
74.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
73.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
73.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
73.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
73.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
72.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
72.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
71.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
71.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
71.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
70.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
70.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
70.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
70.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
70.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
70.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
68.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
68.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
67.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
67.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
66.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
66.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
63.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
63.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
63.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
63.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
63.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
62.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
62.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
61.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
60.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
60.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
60.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
60.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
59.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
59.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
59.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
59.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
58.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
58.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
57.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
57.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
56.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
56.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
56.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
55.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
55.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
54.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
54.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
54.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
53.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
53.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
53.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
52.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
52.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
52.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
52.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
51.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
51.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
51.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
51.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
50.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
50.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
50.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
49.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
49.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
48.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
48.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
48.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
48.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
48.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
48.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
47.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
45.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
45.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
44.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
44.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
43.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
43.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
43.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
43.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
42.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
42.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
41.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
41.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
40.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
40.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
40.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
40.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
40.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
39.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
39.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
39.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
38.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
38.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
38.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
38.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
38.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
37.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
37.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
37.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
36.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
36.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
36.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
36.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
36.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
36.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
36.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
35.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
35.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
35.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
34.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
34.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
34.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
34.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
34.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
33.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
32.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
32.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
32.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
32.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
31.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
31.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
31.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
30.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
30.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
29.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
29.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
29.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
28.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
28.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
27.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
27.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
26.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
26.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
25.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
25.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
25.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
24.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
24.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
24.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
24.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
23.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
23.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
23.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
22.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
22.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
22.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
22.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
22.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
21.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
21.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
19.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
19.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
19.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
18.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
18.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
17.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
16.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
16.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
16.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
15.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
15.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
15.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
14.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A11 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
252.3
Number of samples
231
Samples
Sample
Description
TPM
DO45301
0 years, male, NA, stage:2, dead, 1440 days
3438.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
3123.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
2434.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
2409.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
2106.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
2002.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
1929.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
1857.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
1712.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
1469.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
1448.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
1427.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
1233.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
1209.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
1111.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
1062.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
944.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
892.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
878.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
833.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
808.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
799.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
645.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
632.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
621.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
566.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
553.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
550.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
519.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
471.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
462.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
407.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
402.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
392.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
388.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
373.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
343.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
322.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
317.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
297.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
293.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
256.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
253.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
250.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
250.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
243.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
233.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
233.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
216.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
216.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
215.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
214.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
209.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
209.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
208.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
204.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
202.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
187.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
186.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
185.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
180.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
177.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
176.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
176.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
173.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
170.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
166.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
165.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
161.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
147.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
144.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
140.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
139.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
138.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
137.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
129.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
126.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
123.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
123.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
122.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
118.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
118.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
118.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
114.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
112.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
111.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
108.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
108.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
107.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
106.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
106.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
104.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
102.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
101.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
99.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
98.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
98.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
98.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
94.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
94.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
91.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
90.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
90.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
88.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
88.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
87.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
85.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
85.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
84.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
83.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
82.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
79.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
78.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
78.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
77.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
76.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
76.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
75.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
75.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
74.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
73.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
73.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
73.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
72.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
67.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
62.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
61.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
61.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
60.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
58.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
56.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
55.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
55.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
54.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
53.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
52.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
51.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
50.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
49.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
48.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
48.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
48.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
47.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
46.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
46.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
45.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
45.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
44.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
44.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
43.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
43.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
41.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
40.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
40.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
39.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
39.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
39.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
39.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
38.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
38.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
38.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
36.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
35.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
35.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
35.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
34.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
34.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
33.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
33.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
32.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
31.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
31.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
30.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
30.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
30.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
30.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
30.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
30.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
30.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
28.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
28.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
27.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
27.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
26.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
26.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
25.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
25.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
24.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
24.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
24.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
24.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
22.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
21.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
21.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
21.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
20.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
20.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
20.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
19.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
19.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
18.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
18.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
18.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
17.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
17.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
17.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
17.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
16.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
16.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
16.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
15.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
15.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
15.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
14.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
14.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
13.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
13.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
13.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
12.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
12.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
12.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
11.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
11.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
11.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
11.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
10.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
10.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
9.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
8.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
5.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
917
Tumor
2.6
491
Tumor
2.1
311
Tumor
1.9
211
Tumor
1.8
283
Tumor
1.7
395
Tumor
1.2
375
Tumor
1.2
724
Normal
1.2
661
Tumor
1.1
715
Tumor
1.0
525
Tumor
1.0
813
Tumor
0.9
385
Tumor
0.9
135
Tumor
0.9
814
Normal
0.9
125
Tumor
0.8
455
Tumor
0.8
478
Normal
0.8
447
Tumor
0.8
257
Tumor
0.8
535
Tumor
0.7
421
Tumor
0.7
536
Normal
0.7
545
Tumor
0.7
434
Normal
0.7
343
Tumor
0.6
444
Normal
0.6
213
Tumor
0.6
817
Tumor
0.5
713
Tumor
0.5
492
Normal
0.5
538
Normal
0.5
192
Normal
0.5
851
Tumor
0.5
697
Tumor
0.5
498
Normal
0.5
224
Normal
0.5
383
Tumor
0.5
185
Tumor
0.5
467
Tumor
0.4
141
Tumor
0.4
916
Normal
0.4
524
Normal
0.4
881
Tumor
0.4
911
Tumor
0.4
262
Normal
0.4
563
Tumor
0.4
573
Tumor
0.4
268
Normal
0.4
297
Tumor
0.4
126
Normal
0.4
147
Tumor
0.3
857
Tumor
0.3
943
Tumor
0.3
461
Tumor
0.3
363
Tumor
0.3
124
Normal
0.3
1028
Normal
0.3
384
Normal
0.3
284
Normal
0.3
191
Tumor
0.3
978
Normal
0.2
415
Tumor
0.2
188
Normal
0.2
883
Tumor
0.2
217
Tumor
0.2
195
Tumor
0.2
966
Normal
0.2
187
Tumor
0.2
914
Normal
0.1
963
Tumor
0.1
672
Normal
0.1
852
Normal
0.1
146
Normal
0.1
874
Normal
0.1
816
Normal
0.1
145
Tumor
0.1
362
Normal
0.1
212
Normal
0.1
223
Tumor
0.1
671
Tumor
0.1
1044
Normal
0.1
721
Tumor
0.1
516
Normal
0.1
331
Tumor
0.1
686
Normal
0.1
976
Normal
0.1
463
Tumor
0.1
778
Normal
0.0
214
Normal
0.0
355
Tumor
0.0
364
Normal
0.0
983
Tumor
0.0
716
Normal
0.0
823
Tumor
0.0
984
Normal
0.0
567
Tumor
0.0
662
Normal
0.0
427
Tumor
0.0
386
Normal
0.0
663
Tumor
0.0
218
Normal
0.0
367
Tumor
0.0
416
Normal
0.0
272
Normal
0.0
344
Normal
0.0
161
Tumor
0.0
488
Normal
0.0
365
Tumor
0.0
138
Normal
0.0
558
Normal
0.0
975
Tumor
0.0
413
Tumor
-0.1
312
Normal
-0.1
861
Tumor
-0.1
114
Normal
-0.1
111
Normal
-0.1
366
Normal
-0.1
954
Normal
-0.1
728
Normal
-0.1
744
Normal
-0.1
396
Normal
-0.1
884
Normal
-0.1
514
Normal
-0.1
494
Normal
-0.1
956
Normal
-0.1
858
Normal
-0.1
228
Normal
-0.1
913
Tumor
-0.1
982
Normal
-0.1
574
Normal
-0.1
868
Normal
-0.1
664
Normal
-0.2
433
Tumor
-0.2
142
Normal
-0.2
493
Tumor
-0.2
738
Normal
-0.2
286
Normal
-0.2
745
Tumor
-0.2
918
Normal
-0.2
468
Normal
-0.2
424
Normal
-0.2
352
Normal
-0.2
1045
Tumor
-0.2
815
Tumor
-0.2
1015
Tumor
-0.2
394
Normal
-0.2
474
Normal
-0.2
137
Tumor
-0.2
391
Tumor
-0.2
628
Normal
-0.2
696
Normal
-0.2
968
Normal
-0.2
878
Normal
-0.2
368
Normal
-0.2
926
Normal
-0.2
464
Normal
-0.2
128
Normal
-0.2
952
Normal
-0.2
528
Normal
-0.2
665
Tumor
-0.2
958
Normal
-0.2
864
Normal
-0.2
261
Tumor
-0.2
332
Normal
-0.2
392
Normal
-0.3
1016
Normal
-0.3
414
Normal
-0.3
824
Normal
-0.3
328
Normal
-0.3
882
Normal
-0.3
518
Normal
-0.3
924
Normal
-0.3
722
Normal
-0.3
1031
Tumor
-0.3
866
Normal
-0.3
756
Normal
-0.3
354
Normal
-0.3
786
Normal
-0.3
818
Normal
-0.3
867
Tumor
-0.3
448
Normal
-0.3
422
Normal
-0.3
432
Normal
-0.3
714
Normal
-0.3
313
Tumor
-0.3
526
Normal
-0.3
698
Normal
-0.3
922
Normal
-0.3
232
Normal
-0.3
278
Normal
-0.3
666
Normal
-0.3
388
Normal
-0.3
466
Normal
-0.3
1026
Normal
-0.3
955
Tumor
-0.3
472
Normal
-0.3
136
Normal
-0.4
1046
Normal
-0.4
356
Normal
-0.4
376
Normal
-0.4
471
Tumor
-0.4
428
Normal
-0.4
957
Tumor
-0.4
487
Tumor
-0.4
361
Tumor
-0.4
277
Tumor
-0.4
456
Normal
-0.4
877
Tumor
-0.4
1021
Tumor
-0.4
537
Tumor
-0.4
554
Normal
-0.4
387
Tumor
-0.4
446
Normal
-0.4
641
Tumor
-0.4
915
Tumor
-0.4
258
Normal
-0.4
925
Tumor
-0.4
572
Normal
-0.4
196
Normal
-0.4
642
Normal
-0.4
785
Tumor
-0.4
617
Tumor
-0.4
298
Normal
-0.4
412
Normal
-0.4
497
Tumor
-0.4
564
Normal
-0.4
923
Tumor
-0.4
944
Normal
-0.4
865
Tumor
-0.4
546
Normal
-0.4
483
Tumor
-0.5
1032
Normal
-0.5
921
Tumor
-0.5
172
Normal
-0.5
162
Normal
-0.5
285
Tumor
-0.5
723
Tumor
-0.5
938
Normal
-0.5
484
Normal
-0.5
132
Normal
-0.5
462
Normal
-0.5
1022
Normal
-0.5
912
Normal
-0.5
452
Normal
-0.5
636
Normal
-0.5
426
Normal
-0.5
742
Normal
-0.5
862
Normal
-0.5
267
Tumor
-0.5
148
Normal
-0.5
186
Normal
-0.5
113
Tumor
-0.5
1042
Normal
-0.6
327
Tumor
-0.6
1043
Tumor
-0.6
648
Normal
-0.6
423
Tumor
-0.6
314
Normal
-0.6
746
Normal
-0.6
451
Tumor
-0.6
1014
Normal
-0.6
873
Tumor
-0.6
863
Tumor
-0.6
557
Tumor
-0.6
964
Normal
-0.6
618
Normal
-0.6
755
Tumor
-0.6
358
Normal
-0.6
685
Tumor
-0.7
737
Tumor
-0.7
534
Normal
-0.7
222
Normal
-0.7
616
Normal
-0.7
515
Tumor
-0.7
482
Normal
-0.7
568
Normal
-0.7
436
Normal
-0.7
227
Tumor
-0.7
342
Normal
-0.7
951
Tumor
-0.7
553
Tumor
-0.7
127
Tumor
-0.7
231
Tumor
-0.8
271
Tumor
-0.8
953
Tumor
-0.8
431
Tumor
-0.8
727
Tumor
-0.8
221
Tumor
-0.8
351
Tumor
-0.8
527
Tumor
-0.8
353
Tumor
-0.9
443
Tumor
-0.9
341
Tumor
-0.9
517
Tumor
-0.9
481
Tumor
-0.9
393
Tumor
-1.0
615
Tumor
-1.0
123
Tumor
-1.0
1013
Tumor
-1.0
627
Tumor
-1.0
937
Tumor
-1.0
977
Tumor
-1.0
647
Tumor
-1.0
171
Tumor
-1.0
523
Tumor
-1.0
967
Tumor
-1.1
513
Tumor
-1.1
695
Tumor
-1.1
411
Tumor
-1.1
465
Tumor
-1.1
425
Tumor
-1.1
741
Tumor
-1.1
477
Tumor
-1.2
965
Tumor
-1.2
777
Tumor
-1.2
1041
Tumor
-1.2
571
Tumor
-1.2
445
Tumor
-1.2
112
Tumor
-1.3
533
Tumor
-1.3
1027
Tumor
-1.3
743
Tumor
-1.4
1025
Tumor
-1.4
473
Tumor
-1.4
981
Tumor
-1.5
435
Tumor
-1.5
131
Tumor
-1.5
357
Tumor
-1.5
635
Tumor
-1.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.