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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
INHBB is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
329.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
71.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
70.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
65.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
64.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
63.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
56.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
56.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
53.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
52.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
51.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
48.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
46.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
44.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
44.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
43.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
41.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
38.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
37.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
35.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
35.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
35.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
35.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
34.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
33.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
33.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
32.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
31.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
30.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
30.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
30.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
30.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
30.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
29.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
29.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
29.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
29.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
29.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
28.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
28.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
28.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
27.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
27.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
27.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
27.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
27.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
26.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
26.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
26.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
26.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
26.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
26.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
25.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
25.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
25.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
24.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
24.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
24.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
24.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
24.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
24.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
24.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
23.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
23.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
23.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
23.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
22.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
21.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
21.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
20.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
20.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
20.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
20.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
19.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
19.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
18.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
18.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
18.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
17.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
17.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
17.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
17.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
17.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
17.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
16.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
16.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
16.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
16.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
16.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
16.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
16.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
16.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
16.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
16.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
16.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
15.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
15.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
15.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
15.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
15.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
15.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
15.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
15.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
14.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
14.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
14.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
14.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
14.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
14.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
14.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
14.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
14.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
14.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
14.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
14.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
14.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
13.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
13.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
13.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
13.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
13.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
13.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
13.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
13.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
13.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
13.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
13.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
13.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
13.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
13.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
13.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
13.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
12.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
12.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
12.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
12.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
12.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
12.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
12.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
12.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
12.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
12.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
12.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
12.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
12.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
12.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
12.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
12.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
12.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
11.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
11.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
11.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
11.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
11.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
11.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
11.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
11.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
11.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
11.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
11.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
11.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
11.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
11.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
11.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
11.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
11.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
10.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
10.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
10.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
10.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
10.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
10.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
10.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
10.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
10.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
10.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
10.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
9.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
9.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
9.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
9.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
9.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
9.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
9.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
9.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
9.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
9.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
9.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
9.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
9.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
9.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
9.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
9.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
9.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
9.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
9.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
9.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
9.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
9.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
8.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
8.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
8.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
8.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
8.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
8.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
8.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
8.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
8.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
8.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
8.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
8.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
7.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
7.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
7.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
7.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
7.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
7.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
7.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
7.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
7.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
7.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
7.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
7.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
7.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
7.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
6.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
6.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
6.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
6.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
6.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
6.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
6.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
6.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
6.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
6.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
6.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
6.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
6.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
6.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
6.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
6.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
6.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
6.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
6.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
6.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
5.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
5.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
5.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
5.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
5.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
5.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
5.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
5.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
5.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
5.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
5.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
5.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
5.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
4.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
4.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
4.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
4.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
4.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
4.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
4.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
4.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
4.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
4.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
4.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
4.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
4.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
4.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
4.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
4.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
3.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
3.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
3.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
3.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
3.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
3.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
3.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
3.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
3.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
3.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
3.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
3.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
3.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
2.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
2.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
2.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
2.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
2.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
2.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
2.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
2.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
2.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
2.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
2.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
2.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
2.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
2.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
2.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
2.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
2.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
2.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
2.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
2.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
2.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
1.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
1.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
1.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
1.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
1.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
0.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
0.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
0.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
INHBB is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.0
Number of samples
231
Samples
Sample
Description
TPM
DO45209
0 years, male, NA, stage:4, alive, 1350 days
99.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
54.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
47.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
47.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
43.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
39.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
37.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
34.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
32.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
32.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
32.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
32.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
31.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
31.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
30.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
30.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
29.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
29.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
29.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
29.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
29.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
28.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
28.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
27.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
27.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
26.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
26.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
25.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
24.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
23.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
23.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
22.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
22.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
22.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
21.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
21.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
20.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
20.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
20.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
19.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
19.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
19.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
19.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
19.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
19.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
18.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
18.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
18.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
18.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
17.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
17.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
17.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
17.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
17.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
17.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
16.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
16.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
16.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
16.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
16.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
16.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
16.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
15.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
15.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
15.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
15.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
15.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
15.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
14.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
14.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
14.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
14.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
14.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
14.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
14.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
14.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
14.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
13.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
13.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
13.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
13.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
13.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
13.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
13.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
13.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
13.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
12.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
12.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
12.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
11.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
11.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
11.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
11.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
11.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
11.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
10.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
10.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
10.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
10.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
10.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
10.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
10.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
10.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
10.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
9.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
9.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
9.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
9.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
9.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
9.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
9.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
9.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
9.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
9.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
9.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
8.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
8.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
8.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
8.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
8.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
7.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
7.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
7.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
7.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
7.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
7.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
7.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
7.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
7.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
7.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
7.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
6.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
6.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
6.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
6.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
6.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
6.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
6.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
6.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
6.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
6.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
6.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
6.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
6.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
6.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
6.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
6.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
6.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
5.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
5.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
5.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
5.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
5.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
5.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
5.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
5.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
5.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
4.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
4.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
4.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
4.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
4.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
4.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
4.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
4.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
4.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
4.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
4.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
4.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
4.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
3.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
3.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
3.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
3.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
3.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
3.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
3.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
3.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
3.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
3.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
3.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
3.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
3.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
2.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
2.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
2.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
2.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
2.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
2.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
2.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
2.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
2.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
2.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
2.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
2.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
2.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
2.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
2.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
2.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
2.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
2.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
1.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
1.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
1.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
1.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
1.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
1.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
1.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
1.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
1.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
1.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
1.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
1.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
1.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
1.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
1.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
1.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
0.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
0.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
0.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
0.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
0.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
0.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
0.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
0.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
0.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
343
Tumor
3.1
425
Tumor
2.7
661
Tumor
2.5
357
Tumor
1.2
662
Normal
1.0
443
Tumor
0.9
445
Tumor
0.6
564
Normal
0.5
672
Normal
0.4
572
Normal
0.4
914
Normal
0.4
314
Normal
0.4
112
Tumor
0.3
568
Normal
0.3
422
Normal
0.3
955
Tumor
0.3
431
Tumor
0.3
428
Normal
0.2
298
Normal
0.2
424
Normal
0.2
665
Tumor
0.2
435
Tumor
0.2
954
Normal
0.2
332
Normal
0.2
944
Normal
0.1
858
Normal
0.1
664
Normal
0.1
414
Normal
0.1
857
Tumor
0.1
851
Tumor
0.1
818
Normal
0.1
824
Normal
0.1
956
Normal
0.1
423
Tumor
0.1
113
Tumor
0.1
342
Normal
0.1
545
Tumor
0.1
527
Tumor
0.1
312
Normal
0.1
817
Tumor
0.0
666
Normal
0.0
952
Normal
0.0
421
Tumor
0.0
557
Tumor
0.0
344
Normal
0.0
938
Normal
0.0
815
Tumor
0.0
278
Normal
-0.1
953
Tumor
-0.1
128
Normal
-0.1
355
Tumor
-0.1
823
Tumor
-0.1
882
Normal
-0.1
528
Normal
-0.1
574
Normal
-0.1
671
Tumor
-0.1
411
Tumor
-0.1
814
Normal
-0.2
426
Normal
-0.2
663
Tumor
-0.2
951
Tumor
-0.2
558
Normal
-0.2
852
Normal
-0.2
563
Tumor
-0.2
816
Normal
-0.2
127
Tumor
-0.2
111
Normal
-0.3
546
Normal
-0.3
571
Tumor
-0.3
444
Normal
-0.3
114
Normal
-0.3
937
Tumor
-0.3
878
Normal
-0.3
433
Tumor
-0.3
912
Normal
-0.3
756
Normal
-0.3
125
Tumor
-0.3
884
Normal
-0.3
881
Tumor
-0.3
363
Tumor
-0.4
427
Tumor
-0.4
123
Tumor
-0.4
297
Tumor
-0.4
943
Tumor
-0.4
327
Tumor
-0.4
124
Normal
-0.4
648
Normal
-0.4
356
Normal
-0.4
351
Tumor
-0.4
534
Normal
-0.4
538
Normal
-0.4
554
Normal
-0.4
352
Normal
-0.5
126
Normal
-0.5
416
Normal
-0.5
313
Tumor
-0.5
434
Normal
-0.5
553
Tumor
-0.6
415
Tumor
-0.6
412
Normal
-0.6
413
Tumor
-0.6
277
Tumor
-0.6
364
Normal
-0.6
341
Tumor
-0.6
432
Normal
-0.6
567
Tumor
-0.7
913
Tumor
-0.7
786
Normal
-0.7
877
Tumor
-0.7
778
Normal
-0.7
331
Tumor
-0.7
446
Normal
-0.8
883
Tumor
-0.8
358
Normal
-0.8
911
Tumor
-0.8
533
Tumor
-0.8
436
Normal
-0.8
353
Tumor
-0.8
537
Tumor
-0.8
573
Tumor
-0.9
328
Normal
-0.9
755
Tumor
-0.9
647
Tumor
-1.0
311
Tumor
-1.0
813
Tumor
-1.0
354
Normal
-1.0
785
Tumor
-1.0
777
Tumor
-1.1
745
Tumor
-1.2
746
Normal
-1.2
471
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
473
Tumor
N/A
232
Normal
N/A
474
Normal
N/A
477
Tumor
N/A
478
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
484
Normal
N/A
365
Tumor
N/A
366
Normal
N/A
487
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
368
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
1016
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
1013
Tumor
N/A
713
Tumor
N/A
714
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
866
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
641
Tumor
N/A
642
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
535
Tumor
N/A
536
Normal
N/A
685
Tumor
N/A
686
Normal
N/A
447
Tumor
N/A
448
Normal
N/A
451
Tumor
N/A
452
Normal
N/A
211
Tumor
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
463
Tumor
N/A
222
Normal
N/A
464
Normal
N/A
223
Tumor
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.