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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DENND2D is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
57.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
49.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
47.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
42.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
38.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
37.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
37.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
36.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
36.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
35.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
33.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
32.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
31.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
30.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
30.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
30.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
29.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
27.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
26.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
26.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
25.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
25.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
24.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
23.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
22.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
22.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
22.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
21.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
21.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
20.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
19.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
19.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
19.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
19.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
18.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
18.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
17.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
17.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
16.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
16.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
15.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
15.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
15.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
14.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
13.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
13.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
13.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
12.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
12.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
12.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
12.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
12.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
11.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
11.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
10.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
9.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
2.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DENND2D is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
69.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
58.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
55.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
52.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
46.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
45.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
44.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
44.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
43.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
42.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
42.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
41.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
39.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
39.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
39.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
36.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
36.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
36.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
36.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
35.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
34.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
34.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
34.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
33.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
33.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
33.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
33.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
32.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
32.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
32.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
31.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
30.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
30.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
30.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
30.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
30.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
30.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
29.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
29.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
29.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
29.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
28.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
28.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
28.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
28.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
28.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
28.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
27.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
27.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
27.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
27.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
27.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
27.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
27.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
26.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
26.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
26.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
26.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
25.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
25.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
25.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
25.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
25.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
24.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
24.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
24.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
24.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
24.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
24.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
24.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
24.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
24.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
24.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
24.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
24.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
23.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
23.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
23.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
23.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
23.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
23.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
23.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
23.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
23.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
23.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
23.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
23.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
22.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
22.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
22.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
22.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
21.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
21.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
21.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
21.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
21.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
21.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
21.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
21.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
21.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
21.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
21.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
21.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
21.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
21.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
21.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
20.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
20.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
20.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
20.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
20.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
20.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
20.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
20.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
20.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
20.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
20.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
20.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
20.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
20.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
20.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
20.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
20.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
20.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
20.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
20.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
20.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
20.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
20.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
19.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
19.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
19.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
19.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
19.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
19.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
19.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
19.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
19.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
19.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
19.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
19.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
19.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
19.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
18.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
18.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
18.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
18.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
18.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
18.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
18.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
18.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
18.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
18.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
17.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
17.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
17.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
17.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
17.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
17.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
17.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
17.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
17.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
17.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
17.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
17.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
17.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
17.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
17.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
17.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
17.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
17.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
16.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
16.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
16.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
16.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
16.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
16.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
16.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
16.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
16.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
16.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
16.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
16.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
16.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
16.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
16.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
15.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
15.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
15.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
15.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
15.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
15.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
15.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
15.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
15.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
15.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
15.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
15.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
15.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
15.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
15.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
15.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
15.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
15.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
15.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
15.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
15.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
15.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
15.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
15.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
15.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
15.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
15.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
15.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
15.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
14.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
14.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
14.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
14.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
14.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
14.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
14.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
14.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
14.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
14.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
14.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
14.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
14.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
14.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
14.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
14.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
14.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
14.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
14.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
14.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
14.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
13.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
13.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
13.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
13.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
13.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
13.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
13.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
13.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
13.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
13.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
13.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
13.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
13.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
13.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
13.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
13.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
13.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
13.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
13.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
12.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
12.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
12.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
12.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
12.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
12.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
12.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
12.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
12.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
12.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
12.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
12.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
12.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
12.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
12.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
12.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
12.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
12.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
12.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
12.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
12.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
12.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
12.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
12.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
12.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
12.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
11.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
11.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
11.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
11.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
11.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
11.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
11.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
11.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
11.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
11.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
11.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
11.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
11.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
11.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
11.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
11.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
11.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
11.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
11.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
11.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
10.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
10.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
10.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
10.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
10.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
10.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
10.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
10.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
10.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
10.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
10.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
10.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
10.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
10.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
10.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
10.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
9.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
9.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
9.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
9.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
9.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
9.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
9.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
9.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
9.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
9.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
9.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
9.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
9.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
8.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
8.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
8.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
8.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
8.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
8.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
8.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
8.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
8.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
8.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
8.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
8.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
8.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
8.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
8.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
8.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
8.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
8.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
8.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
7.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
7.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
7.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
7.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
7.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
7.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
7.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
7.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
7.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
7.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
7.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
7.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
7.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
7.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
7.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
7.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
7.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
7.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
7.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
6.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
6.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
6.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
6.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
6.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
6.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
6.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
6.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
6.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
6.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
6.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
5.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
5.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
5.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
5.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
5.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
5.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
5.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
5.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
4.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
4.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
4.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
4.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
4.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
3.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
3.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
3.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
3.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
3.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
3.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
3.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
3.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
3.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
3.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
2.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
2.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
2.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
2.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
1.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
1.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
1.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DENND2D is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
63.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
54.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
54.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
47.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
46.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
45.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
41.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
37.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
37.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
37.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
37.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
36.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
35.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
35.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
33.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
32.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
32.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
30.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
29.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
29.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
29.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
28.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
27.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
27.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
26.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
25.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
25.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
24.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
24.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
24.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
24.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
23.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
22.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
22.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
22.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
22.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
21.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
21.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
21.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
20.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
20.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
20.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
20.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
20.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
20.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
19.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
19.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
18.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
18.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
18.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
18.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
18.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
18.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
18.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
17.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
17.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
17.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
17.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
16.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
16.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
16.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
15.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
15.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
15.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
14.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
14.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
14.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
13.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
13.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
13.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
12.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
12.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
12.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
11.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
11.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
10.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
10.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
10.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
10.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
9.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
9.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
7.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
7.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
6.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DENND2D is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
151.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
64.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
63.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
58.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
46.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
45.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
45.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
45.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
42.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
40.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
40.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
40.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
38.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
38.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
36.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
36.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
35.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
33.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
31.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
31.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
31.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
31.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
30.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
30.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
30.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
29.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
29.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
29.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
29.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
29.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
29.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
29.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
27.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
27.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
27.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
27.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
27.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
27.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
26.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
26.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
26.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
25.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
25.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
25.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
25.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
25.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
24.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
24.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
24.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
24.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
24.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
23.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
23.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
23.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
23.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
23.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
23.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
22.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
22.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
22.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
21.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
21.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
21.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
21.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
21.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
21.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
21.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
21.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
21.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
21.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
21.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
20.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
20.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
20.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
20.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
20.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
20.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
20.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
20.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
20.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
19.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
19.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
19.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
19.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
19.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
19.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
19.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
18.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
18.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
18.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
18.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
18.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
17.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
17.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
17.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
17.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
17.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
17.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
17.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
17.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
16.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
16.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
16.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
16.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
16.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
16.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
16.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
16.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
16.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
15.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
15.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
15.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
15.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
15.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
15.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
15.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
15.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
15.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
15.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
15.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
15.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
15.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
14.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
14.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
14.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
14.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
14.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
14.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
14.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
14.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
14.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
13.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
13.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
13.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
13.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
13.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
13.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
13.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
13.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
13.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
13.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
13.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
13.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
13.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
13.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
12.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
12.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
12.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
12.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
12.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
12.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
12.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
12.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
12.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
12.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
12.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
12.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
11.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
11.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
11.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
11.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
11.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
11.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
11.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
11.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
10.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
10.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
10.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
10.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
10.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
9.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
9.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
9.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
9.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
9.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
9.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
8.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
8.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
8.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
8.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
8.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
7.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
7.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
7.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
7.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
7.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
7.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
7.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
7.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
7.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
6.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
6.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
6.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
6.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
6.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
6.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
6.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
5.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
5.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
5.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
5.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
5.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
5.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
4.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
4.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
4.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
4.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
4.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
4.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
2.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
2.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
2.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
1.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
1.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
1.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.4
CPT0078660003
Tumor
1.0
CPT0001180009
Tumor
0.9
CPT0065430003
Tumor
0.6
CPT0025050003
Tumor
0.6
CPT0092160003
Tumor
0.6
CPT0065930003
Tumor
0.6
CPT0001540009
Tumor
0.6
CPT0078990003
Tumor
0.5
CPT0015730003
Tumor
0.5
CPT0012640003
Normal
0.4
CPT0012280003
Tumor
0.4
CPT0079380003
Tumor
0.3
CPT0078530001
Normal
0.3
CPT0086360003
Tumor
0.3
CPT0009020003
Normal
0.3
CPT0087040003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0092800003
Normal
0.3
CPT0010110003
Tumor
0.3
CPT0069190001
Normal
0.3
CPT0020120003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0079300001
Normal
0.2
CPT0006900003
Tumor
0.2
CPT0063330001
Normal
0.2
CPT0092290003
Tumor
0.2
CPT0088920001
Normal
0.2
CPT0064370003
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0079510001
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0001550001
Normal
0.2
CPT0078830003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0065750003
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0065690003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0077310003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0078670001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0012180003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0078800003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0088640003
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0075170001
Normal
0.0
CPT0088550004
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0006530001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0076350001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0001340003
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0092190003
Normal
0.0
CPT0018250001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0023710001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0079000001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0086950003
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0026410003
Tumor
-0.1
CPT0010170001
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0076330003
Tumor
-0.2
CPT0092740003
Normal
-0.2
CPT0081600003
Tumor
-0.2
CPT0088710001
Normal
-0.2
CPT0006630003
Tumor
-0.2
CPT0012900004
Tumor
-0.2
CPT0000890001
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0066470004
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0077110003
Tumor
-0.3
CPT0021240003
Tumor
-0.3
CPT0020130001
Normal
-0.3
CPT0019130003
Tumor
-0.3
CPT0012290003
Normal
-0.3
CPT0077490003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0085670003
Tumor
-0.3
CPT0014450004
Tumor
-0.3
CPT0077320001
Normal
-0.3
CPT0024680001
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0079230003
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0078510003
Tumor
-0.3
CPT0012550003
Tumor
-0.4
CPT0089480003
Normal
-0.4
CPT0000780007
Tumor
-0.4
CPT0023360001
Normal
-0.4
CPT0009000003
Tumor
-0.4
CPT0081880003
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0088760003
Tumor
-0.4
CPT0084560003
Tumor
-0.4
CPT0011410003
Tumor
-0.5
CPT0086970003
Normal
-0.5
CPT0088780001
Normal
-0.5
CPT0011240003
Tumor
-0.5
CPT0089460004
Tumor
-0.5
CPT0007470001
Normal
-0.6
CPT0012670003
Tumor
-0.6
CPT0006950001
Normal
-0.6
CPT0025610001
Normal
-0.6
CPT0088630003
Tumor
-0.7
CPT0088970003
Tumor
-0.9
CPT0002270011
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.