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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NCSTN is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
97.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
94.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
83.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
73.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
59.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
54.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
50.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
49.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
47.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
46.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
46.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
45.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
44.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
44.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
44.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
43.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
43.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
42.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
40.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
37.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
37.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
35.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
35.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
35.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
35.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
35.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
34.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
34.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
34.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
33.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
33.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
32.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
32.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
32.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
31.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
30.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
30.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
28.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
28.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
28.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
27.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
27.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
26.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
26.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
25.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
24.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
24.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
23.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
23.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
21.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
21.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
20.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
20.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
20.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
20.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
19.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
18.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
17.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
17.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
16.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
15.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
14.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
12.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NCSTN is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
62.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
155.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
144.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
136.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
133.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
132.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
129.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
129.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
126.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
125.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
123.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
119.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
118.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
117.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
117.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
114.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
114.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
112.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
110.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
110.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
109.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
107.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
106.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
106.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
103.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
102.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
101.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
101.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
100.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
99.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
99.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
99.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
98.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
98.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
97.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
96.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
96.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
96.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
95.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
95.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
94.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
94.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
94.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
93.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
93.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
93.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
92.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
92.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
92.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
92.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
92.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
91.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
91.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
90.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
89.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
89.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
89.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
88.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
88.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
87.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
87.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
87.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
86.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
86.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
86.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
85.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
85.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
85.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
85.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
85.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
85.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
85.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
85.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
84.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
84.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
84.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
84.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
84.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
84.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
84.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
84.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
83.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
83.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
83.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
83.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
83.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
83.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
82.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
82.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
82.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
82.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
82.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
82.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
82.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
81.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
81.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
81.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
80.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
80.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
80.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
80.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
80.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
80.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
80.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
80.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
80.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
79.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
79.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
79.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
79.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
79.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
79.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
79.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
78.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
78.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
78.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
78.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
77.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
77.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
77.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
77.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
77.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
76.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
76.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
76.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
76.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
76.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
76.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
76.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
76.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
75.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
75.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
75.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
75.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
75.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
75.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
75.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
75.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
75.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
75.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
75.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
74.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
74.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
74.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
74.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
73.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
73.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
73.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
73.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
73.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
73.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
72.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
72.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
72.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
72.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
72.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
72.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
72.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
72.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
72.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
71.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
71.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
71.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
71.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
71.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
70.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
70.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
70.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
70.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
70.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
70.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
70.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
70.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
70.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
70.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
70.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
70.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
70.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
69.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
69.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
69.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
69.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
69.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
69.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
69.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
69.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
69.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
68.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
68.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
68.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
68.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
68.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
68.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
68.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
68.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
68.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
68.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
68.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
68.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
67.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
67.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
67.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
67.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
67.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
67.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
67.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
67.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
66.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
66.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
66.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
66.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
66.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
66.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
66.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
66.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
66.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
66.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
66.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
65.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
65.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
65.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
65.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
65.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
65.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
65.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
65.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
65.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
65.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
65.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
65.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
65.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
64.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
64.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
64.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
64.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
64.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
64.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
64.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
64.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
64.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
64.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
64.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
63.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
63.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
63.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
63.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
63.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
63.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
63.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
63.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
63.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
62.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
62.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
62.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
62.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
62.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
62.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
62.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
62.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
62.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
62.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
62.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
62.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
62.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
62.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
62.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
62.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
62.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
61.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
61.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
61.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
61.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
61.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
61.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
60.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
60.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
60.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
60.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
60.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
60.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
60.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
60.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
60.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
59.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
59.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
59.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
59.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
59.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
59.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
59.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
59.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
59.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
58.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
58.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
58.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
58.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
58.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
58.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
58.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
57.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
57.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
57.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
57.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
57.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
57.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
57.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
57.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
57.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
57.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
56.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
56.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
56.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
56.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
56.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
56.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
56.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
56.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
56.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
55.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
55.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
55.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
55.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
55.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
55.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
55.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
55.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
55.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
54.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
54.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
54.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
54.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
54.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
54.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
54.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
54.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
53.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
53.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
53.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
53.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
53.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
53.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
53.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
53.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
53.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
53.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
53.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
53.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
53.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
53.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
52.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
52.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
52.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
52.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
52.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
52.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
52.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
52.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
52.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
51.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
51.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
51.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
51.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
51.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
51.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
51.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
51.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
50.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
50.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
50.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
50.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
49.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
49.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
49.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
49.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
49.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
49.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
49.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
48.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
48.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
48.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
48.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
47.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
47.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
47.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
47.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
47.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
47.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
47.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
46.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
46.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
46.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
46.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
46.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
46.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
46.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
46.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
45.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
45.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
45.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
45.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
44.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
44.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
44.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
44.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
44.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
44.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
44.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
44.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
43.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
43.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
43.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
43.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
43.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
43.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
43.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
42.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
42.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
42.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
42.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
42.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
42.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
42.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
42.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
41.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
41.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
41.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
41.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
41.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
41.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
40.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
40.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
40.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
40.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
40.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
40.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
40.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
40.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
39.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
39.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
39.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
39.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
39.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
39.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
38.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
38.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
38.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
38.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
37.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
37.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
37.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
37.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
37.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
36.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
36.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
36.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
35.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
35.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
35.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
35.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
34.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
34.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
34.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
34.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
34.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
34.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
34.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
34.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
33.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
33.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
33.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
33.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
33.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
33.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
33.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
32.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
32.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
32.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
32.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
32.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
31.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
31.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
31.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
31.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
30.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
30.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
30.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
29.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
29.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
28.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
28.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
27.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
27.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
26.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
26.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
26.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
26.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
26.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
26.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
25.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
25.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
24.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
24.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
24.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
23.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
23.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
23.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
23.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
22.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
22.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
21.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
21.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
21.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
19.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
17.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
17.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
16.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
16.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
15.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
14.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
12.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
11.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NCSTN is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
69.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
156.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
138.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
126.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
110.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
107.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
106.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
99.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
98.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
98.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
97.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
95.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
91.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
91.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
88.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
88.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
87.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
87.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
84.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
83.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
83.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
82.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
82.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
81.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
80.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
80.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
79.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
79.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
79.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
78.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
77.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
76.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
76.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
75.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
75.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
75.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
74.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
73.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
73.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
72.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
72.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
72.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
71.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
71.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
71.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
71.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
70.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
70.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
70.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
70.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
69.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
69.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
69.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
67.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
67.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
66.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
65.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
64.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
63.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
62.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
62.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
62.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
62.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
62.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
61.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
61.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
61.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
61.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
60.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
60.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
59.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
59.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
59.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
59.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
59.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
58.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
58.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
57.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
57.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
56.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
56.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
56.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
54.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
52.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
52.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
51.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
49.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
47.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
47.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
47.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
46.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
46.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
44.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
42.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
39.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
35.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
33.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
31.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
25.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NCSTN is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
53.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
164.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
157.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
144.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
144.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
142.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
136.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
124.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
122.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
122.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
107.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
104.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
103.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
101.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
100.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
98.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
97.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
96.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
96.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
96.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
95.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
95.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
93.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
93.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
92.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
90.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
89.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
89.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
89.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
88.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
88.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
87.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
87.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
86.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
85.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
85.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
85.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
84.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
84.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
84.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
83.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
82.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
82.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
81.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
79.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
78.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
78.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
77.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
77.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
76.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
76.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
75.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
74.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
74.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
73.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
72.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
72.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
71.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
71.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
71.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
70.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
69.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
69.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
69.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
68.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
68.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
68.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
67.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
67.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
67.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
66.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
66.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
66.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
66.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
66.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
66.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
66.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
65.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
64.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
63.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
63.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
63.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
62.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
62.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
62.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
62.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
62.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
62.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
61.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
61.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
61.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
60.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
60.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
60.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
59.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
59.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
59.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
59.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
58.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
58.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
57.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
57.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
57.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
57.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
56.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
56.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
56.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
56.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
56.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
55.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
55.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
55.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
55.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
55.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
55.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
55.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
54.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
54.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
54.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
54.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
53.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
53.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
53.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
52.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
52.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
52.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
52.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
52.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
51.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
51.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
50.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
50.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
50.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
50.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
50.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
49.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
49.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
49.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
49.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
49.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
49.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
49.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
49.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
49.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
48.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
48.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
47.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
47.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
47.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
47.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
47.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
47.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
47.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
46.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
46.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
46.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
46.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
46.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
46.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
46.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
45.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
45.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
45.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
45.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
45.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
45.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
44.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
44.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
44.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
43.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
43.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
43.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
42.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
42.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
41.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
41.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
41.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
41.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
41.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
40.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
40.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
40.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
39.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
39.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
39.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
39.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
39.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
39.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
39.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
39.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
38.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
38.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
38.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
38.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
38.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
38.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
38.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
37.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
37.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
37.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
37.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
37.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
37.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
37.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
37.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
36.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
36.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
35.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
35.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
35.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
35.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
35.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
35.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
35.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
34.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
34.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
34.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
34.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
33.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
33.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
33.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
33.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
33.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
32.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
32.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
32.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
31.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
31.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
31.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
31.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
31.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
30.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
30.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
30.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
29.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
28.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
28.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
28.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
28.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
27.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
27.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
27.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
27.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
27.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
26.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
26.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
26.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
26.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
26.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
25.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
25.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
25.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
25.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
25.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
25.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
25.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
25.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
24.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
23.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
23.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
23.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
22.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
20.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
20.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
20.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
19.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
19.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
19.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
19.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
18.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
18.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
18.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
18.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
18.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
17.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
16.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
14.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
13.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
13.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
12.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
9.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
5.8
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0086950003
Tumor
0.9
CPT0014160003
Tumor
0.8
CPT0001340003
Tumor
0.8
CPT0025290003
Tumor
0.7
CPT0092290003
Tumor
0.7
CPT0026420001
Normal
0.7
CPT0002350011
Tumor
0.6
CPT0087040003
Tumor
0.6
CPT0012280003
Tumor
0.6
CPT0089020003
Tumor
0.6
CPT0092730003
Tumor
0.5
CPT0063630003
Tumor
0.5
CPT0078510003
Tumor
0.5
CPT0065430003
Tumor
0.5
CPT0002270011
Tumor
0.5
CPT0065810003
Tumor
0.5
CPT0024670003
Tumor
0.5
CPT0089460004
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0086360003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0077310003
Tumor
0.4
CPT0079480003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0085670003
Tumor
0.2
CPT0079180003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0001540009
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0014370004
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0063640001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0078660003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0088550004
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0089040001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0012900004
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0075170001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0009060003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0014350001
Normal
-0.2
CPT0071150004
Tumor
-0.2
CPT0089480003
Normal
-0.2
CPT0015910003
Tumor
-0.2
CPT0019130003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0075570001
Normal
-0.2
CPT0024680001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0092190003
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0012370003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0069010001
Normal
-0.2
CPT0088500001
Normal
-0.3
CPT0079230003
Tumor
-0.3
CPT0088640003
Normal
-0.3
CPT0077490003
Tumor
-0.3
CPT0077140001
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0079300001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0011240003
Tumor
-0.3
CPT0078530001
Normal
-0.3
CPT0086870003
Tumor
-0.3
CPT0002370001
Normal
-0.3
CPT0079430001
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0077320001
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0088970003
Tumor
-0.4
CPT0081990003
Tumor
-0.4
CPT0012090003
Normal
-0.4
CPT0088900003
Tumor
-0.4
CPT0079000001
Normal
-0.4
CPT0001230001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0017850003
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0019160001
Normal
-0.4
CPT0084560003
Tumor
-0.4
CPT0086830003
Normal
-0.5
CPT0001550001
Normal
-0.5
CPT0014470001
Normal
-0.5
CPT0079510001
Normal
-0.5
CPT0018250001
Normal
-0.6
CPT0012640003
Normal
-0.7
CPT0012920003
Normal
-0.7
CPT0009080003
Normal
-0.8
CPT0009020003
Normal
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
