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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
36.5
nTPM
HPA Brain:
78.7
nTPM
GTEx:
36.5
nTPM
FANTOM5:
83.8
Scaled Tags Per Million
Pig:
29.6
nTPM
Mouse:
46.6
nTPM
Allen mouse:
11.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
78.7
Sample id
Sample description
nTPM
Amygdala nTPM: 59.1
2814
Male, age 76, right hemisphere
103.5
2695
Female, age 67, right hemisphere
74.6
2517
Female, age 94, left hemisphere
45.7
1987
Female, age 91, left hemisphere
35.8
2514
Male, age 75, right hemisphere
35.8
Basal amygdala nTPM: 73.3
2827
Female, age 67, right hemisphere
126.4
1955
Male, age 76, both hemispheres
76.4
2685
Female, age 94, left hemisphere
63.2
2243
Female, age 91, right hemisphere
61.3
2110
Male, age 80, left hemisphere
59.4
2609
Male, age 75, right hemisphere
52.7
Central amygdala nTPM: 70.8
2826
Female, age 94, left hemisphere
110.1
1905
Male, age 76, both hemispheres
107.7
2239
Male, age 80, left hemisphere
55.0
2515
Male, age 75, right hemisphere
47.1
2701
Female, age 91, right hemisphere
34.0
Corticomedial amygdala nTPM: 59.6
2535
Female, age 67, right hemisphere
84.1
2829
Male, age 80, left hemisphere
71.6
2240
Male, age 76, both hemispheres
67.5
2242
Female, age 91, right hemisphere
48.8
2429
Female, age 94, left hemisphere
44.5
2428
Male, age 75, right hemisphere
40.8
Lateral amygdala nTPM: 78.7
2830
Female, age 67, right hemisphere
142.6
1883
Male, age 76, both hemispheres
88.3
2534
Female, age 94, left hemisphere
80.0
2256
Male, age 80, left hemisphere
62.0
2516
Male, age 75, right hemisphere
57.7
2255
Female, age 91, right hemisphere
41.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
36.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 36.5
Samples: 152
Max nTPM: 99.6
Min nTPM: 2.3
Std nTPM: 15.9
Median nTPM: 32.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
99.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
80.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
77.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
74.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
72.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
72.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
71.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
71.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
69.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
65.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
64.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
64.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
62.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
61.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
59.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
59.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
58.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
58.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
57.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
56.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
56.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
53.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
52.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
52.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
52.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
52.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
50.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
50.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
49.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
49.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
49.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
48.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
45.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
45.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
44.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
44.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
44.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
44.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
43.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
43.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
43.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
43.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
41.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
41.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
41.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
40.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
40.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
39.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
39.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
39.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
38.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
38.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
38.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
38.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
38.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
38.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
38.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
38.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
37.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
36.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
36.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
35.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
35.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
35.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
35.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
34.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
34.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
34.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
33.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
33.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
33.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
33.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
33.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
33.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
33.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
33.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
32.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
32.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
32.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
32.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
32.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
32.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
31.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
31.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
30.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
30.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
30.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
29.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
29.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
29.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
29.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
29.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
29.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
29.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
29.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
28.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
28.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
28.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
28.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
28.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
28.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
28.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
28.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
28.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
27.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
27.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
27.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
27.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
27.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
27.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
26.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
26.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
26.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
26.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
26.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
25.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
25.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
25.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
24.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
24.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
24.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
24.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
24.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
24.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
23.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
23.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
23.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
23.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
23.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
22.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
22.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
21.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
21.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
20.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
20.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
20.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
20.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
19.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
19.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
18.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
18.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
17.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
17.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
17.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
16.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
16.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
15.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
14.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
14.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
12.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
8.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
2.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
46.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 46.6
Samples: 4
Max nTPM: 52.2
Min nTPM: 41.9
Sample A
Male
46.9
Sample B
Male
45.4
Sample C
Female
52.2
Sample D
Female
41.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.