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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARPC5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
73.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
69.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
64.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
62.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
61.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
60.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
59.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
58.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
58.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
54.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
54.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
52.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
51.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
48.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
46.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
46.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
45.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
42.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
39.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
38.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
37.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
37.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
35.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
34.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
34.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
33.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
32.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
31.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
31.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
30.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
30.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
30.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
30.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
30.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
30.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
28.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
28.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
28.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
27.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
27.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
26.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
24.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
24.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
23.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
23.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
21.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
20.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
20.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
20.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
19.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
19.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
18.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
17.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
17.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
17.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
12.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
12.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
12.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
11.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
9.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARPC5 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
80.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
274.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
206.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
171.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
166.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
163.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
162.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
160.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
159.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
159.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
155.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
152.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
147.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
145.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
144.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
143.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
143.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
141.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
141.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
141.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
141.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
141.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
140.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
139.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
138.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
138.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
138.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
136.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
136.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
134.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
134.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
134.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
134.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
133.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
131.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
131.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
130.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
130.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
130.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
129.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
129.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
129.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
129.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
129.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
129.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
128.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
128.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
127.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
127.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
127.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
126.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
126.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
126.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
125.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
125.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
125.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
124.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
122.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
122.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
121.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
121.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
121.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
120.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
119.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
119.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
119.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
119.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
119.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
119.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
118.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
118.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
118.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
118.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
118.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
117.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
117.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
117.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
117.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
117.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
116.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
116.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
116.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
116.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
115.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
115.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
115.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
115.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
115.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
114.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
114.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
114.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
114.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
113.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
113.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
112.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
112.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
112.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
112.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
112.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
111.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
111.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
111.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
111.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
111.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
111.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
111.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
110.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
110.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
110.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
109.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
109.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
109.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
109.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
109.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
108.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
108.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
108.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
108.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
108.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
108.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
108.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
108.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
108.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
108.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
107.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
107.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
107.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
107.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
106.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
106.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
105.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
105.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
105.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
104.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
104.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
104.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
104.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
104.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
104.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
104.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
104.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
103.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
103.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
103.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
103.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
102.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
102.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
102.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
102.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
101.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
101.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
101.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
101.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
100.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
100.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
100.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
100.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
100.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
99.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
99.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
99.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
98.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
98.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
98.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
98.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
98.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
98.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
97.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
97.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
97.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
97.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
97.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
97.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
96.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
96.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
96.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
96.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
96.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
96.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
96.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
95.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
95.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
95.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
95.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
95.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
95.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
95.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
95.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
95.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
94.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
94.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
94.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
94.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
93.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
93.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
93.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
93.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
93.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
93.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
93.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
93.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
92.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
92.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
92.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
92.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
92.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
92.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
92.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
92.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
92.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
91.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
91.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
91.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
91.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
91.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
91.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
91.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
90.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
90.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
90.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
89.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
89.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
89.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
89.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
88.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
88.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
88.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
88.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
88.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
88.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
87.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
87.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
87.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
87.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
87.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
87.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
87.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
87.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
87.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
87.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
87.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
86.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
86.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
86.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
86.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
86.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
86.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
86.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
86.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
86.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
85.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
85.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
85.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
85.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
85.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
85.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
84.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
84.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
84.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
84.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
84.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
84.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
83.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
83.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
83.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
83.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
82.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
82.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
82.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
81.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
81.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
81.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
81.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
81.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
80.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
80.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
80.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
80.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
80.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
79.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
79.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
79.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
79.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
79.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
78.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
78.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
78.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
78.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
78.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
78.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
77.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
77.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
77.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
77.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
76.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
75.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
75.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
75.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
75.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
75.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
75.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
75.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
75.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
75.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
74.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
74.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
74.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
74.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
74.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
74.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
74.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
73.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
73.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
73.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
73.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
73.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
73.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
72.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
72.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
71.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
71.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
71.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
71.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
71.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
70.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
70.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
70.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
70.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
70.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
70.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
69.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
69.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
69.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
69.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
69.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
69.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
68.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
68.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
68.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
68.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
68.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
68.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
67.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
66.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
66.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
66.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
65.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
65.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
65.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
65.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
65.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
64.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
64.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
64.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
64.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
63.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
63.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
63.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
63.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
63.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
63.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
63.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
62.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
62.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
62.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
62.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
62.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
61.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
61.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
61.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
61.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
61.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
61.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
61.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
61.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
60.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
60.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
60.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
60.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
60.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
60.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
59.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
59.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
57.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
57.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
57.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
56.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
56.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
56.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
56.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
55.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
55.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
55.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
55.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
55.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
55.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
55.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
54.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
54.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
53.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
53.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
53.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
53.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
52.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
51.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
51.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
51.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
51.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
50.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
50.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
50.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
50.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
49.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
49.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
49.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
49.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
49.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
49.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
49.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
48.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
47.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
47.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
46.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
46.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
46.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
45.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
45.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
45.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
45.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
45.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
44.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
43.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
43.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
43.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
43.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
42.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
41.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
41.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
40.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
40.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
39.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
39.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
39.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
38.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
37.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
37.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
36.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
36.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
36.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
36.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
36.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
36.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
35.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
34.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
34.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
34.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
33.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
33.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
33.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
33.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
32.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
32.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
32.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
31.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
30.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
30.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
29.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
29.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
29.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
29.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
28.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
28.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
28.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
27.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
27.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
27.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
27.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
27.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
27.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
27.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
26.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
26.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
25.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
25.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
25.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
24.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
24.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
23.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
22.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
22.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
21.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
20.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
19.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
19.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
18.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
18.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
18.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
18.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
18.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
17.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
17.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
16.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
16.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
16.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
15.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
14.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
13.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
12.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
11.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
9.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
8.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
5.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARPC5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
106.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
216.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
188.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
188.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
170.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
166.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
165.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
164.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
162.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
157.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
154.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
154.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
149.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
148.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
148.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
146.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
146.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
145.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
145.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
141.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
140.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
136.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
133.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
133.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
132.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
130.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
129.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
128.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
124.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
124.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
123.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
123.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
123.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
122.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
122.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
119.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
119.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
119.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
117.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
116.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
116.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
116.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
115.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
115.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
113.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
112.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
112.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
111.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
111.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
110.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
107.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
107.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
106.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
106.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
103.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
103.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
102.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
101.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
100.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
100.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
100.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
100.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
99.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
98.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
96.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
95.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
93.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
91.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
90.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
87.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
87.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
87.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
87.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
86.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
84.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
84.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
84.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
82.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
80.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
79.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
79.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
79.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
77.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
74.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
73.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
72.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
70.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
68.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
61.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
50.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
49.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
47.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
47.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
47.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
43.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
41.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
38.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
28.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
28.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
26.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARPC5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
61.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
213.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
181.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
177.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
177.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
175.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
173.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
172.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
156.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
140.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
136.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
127.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
127.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
125.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
123.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
123.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
121.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
119.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
118.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
117.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
117.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
116.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
115.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
115.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
115.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
114.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
111.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
111.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
111.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
110.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
109.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
108.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
104.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
103.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
103.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
103.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
102.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
102.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
101.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
100.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
100.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
100.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
99.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
99.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
98.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
97.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
96.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
95.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
93.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
93.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
92.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
92.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
92.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
92.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
90.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
90.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
89.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
88.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
88.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
87.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
85.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
85.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
84.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
84.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
84.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
83.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
83.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
82.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
81.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
81.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
81.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
80.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
80.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
80.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
79.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
79.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
79.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
78.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
78.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
78.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
77.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
77.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
77.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
76.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
76.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
75.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
75.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
74.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
74.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
74.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
74.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
74.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
72.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
72.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
72.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
72.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
72.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
71.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
71.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
71.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
71.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
71.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
71.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
70.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
70.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
70.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
70.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
68.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
67.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
67.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
67.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
66.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
66.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
66.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
66.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
65.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
65.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
65.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
65.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
65.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
64.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
64.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
64.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
64.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
64.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
64.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
64.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
63.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
63.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
63.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
63.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
63.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
63.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
62.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
62.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
62.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
62.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
62.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
62.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
61.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
61.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
61.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
61.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
61.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
60.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
60.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
60.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
59.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
59.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
59.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
59.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
59.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
58.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
58.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
58.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
58.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
57.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
57.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
57.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
55.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
55.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
54.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
54.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
53.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
53.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
53.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
53.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
52.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
51.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
51.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
51.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
50.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
50.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
50.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
50.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
50.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
49.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
49.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
48.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
48.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
48.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
48.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
46.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
46.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
46.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
45.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
45.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
44.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
43.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
43.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
43.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
43.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
42.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
41.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
40.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
40.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
40.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
39.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
38.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
37.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
36.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
36.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
36.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
35.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
34.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
34.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
33.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
33.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
32.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
32.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
32.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
32.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
31.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
31.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
31.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
31.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
30.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
30.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
29.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
29.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
28.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
28.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
27.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
27.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
26.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
26.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
26.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
26.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
25.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
24.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
24.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
23.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
23.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
23.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
23.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
22.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
21.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
20.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
20.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
19.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
19.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
19.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
18.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
18.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
18.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
18.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
15.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
15.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
14.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
14.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
13.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
13.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
13.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
12.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
12.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
11.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
11.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
11.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
11.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
10.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
8.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
7.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
5.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
4.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
3.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.8
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
1.4
CPT0084560003
Tumor
1.2
CPT0017410003
Tumor
0.9
CPT0081880003
Tumor
0.7
CPT0023350003
Tumor
0.7
CPT0076330003
Tumor
0.6
CPT0011240003
Tumor
0.6
CPT0017850003
Tumor
0.6
CPT0075560003
Tumor
0.6
CPT0066480003
Tumor
0.6
CPT0065690003
Tumor
0.6
CPT0025290003
Tumor
0.5
CPT0007860003
Tumor
0.5
CPT0010110003
Tumor
0.5
CPT0092730003
Tumor
0.5
CPT0025050003
Tumor
0.5
CPT0007320003
Tumor
0.5
CPT0021240003
Tumor
0.5
CPT0079380003
Tumor
0.5
CPT0012550003
Tumor
0.5
CPT0078510003
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0001540009
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0075130003
Tumor
0.4
CPT0002350011
Tumor
0.4
CPT0025170003
Tumor
0.4
CPT0001340003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0086950003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0012670003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0088760003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0088480003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0001180009
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0014470001
Normal
0.2
CPT0000640003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0075720003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0066470004
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0014450004
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0026410003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0065750003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0012090003
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0011410003
Tumor
-0.2
CPT0010170001
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0088970003
Tumor
-0.2
CPT0001350001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0020020001
Normal
-0.3
CPT0025580004
Tumor
-0.3
CPT0023710001
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0000790001
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0012770003
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0001230001
Normal
-0.4
CPT0089480003
Normal
-0.5
CPT0088640003
Normal
-0.6
CPT0078660003
Tumor
-0.6
CPT0079180003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
