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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VCAM1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
50.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
28.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
24.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
18.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
17.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
16.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
9.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
7.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
5.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
5.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
5.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
4.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
4.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
4.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
4.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
4.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
4.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
3.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
3.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
2.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
2.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
2.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
2.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
2.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
2.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
2.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
2.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
2.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
2.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
1.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
1.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
1.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
1.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
1.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
1.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
1.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
1.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
1.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
1.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
1.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VCAM1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
242.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
1693.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
1298.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
1216.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
1111.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
983.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
938.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
864.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
851.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
809.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
797.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
777.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
765.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
760.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
719.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
699.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
698.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
680.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
677.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
671.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
660.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
656.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
632.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
622.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
605.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
590.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
584.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
570.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
567.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
567.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
562.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
560.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
558.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
556.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
553.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
543.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
540.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
538.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
537.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
536.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
533.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
528.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
525.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
510.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
506.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
506.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
505.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
499.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
497.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
490.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
489.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
487.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
482.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
480.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
477.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
476.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
470.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
466.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
464.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
464.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
464.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
463.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
462.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
458.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
456.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
456.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
449.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
447.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
447.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
444.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
442.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
441.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
441.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
440.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
439.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
436.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
432.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
427.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
426.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
426.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
417.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
412.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
412.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
409.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
406.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
406.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
404.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
403.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
402.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
402.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
399.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
398.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
398.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
392.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
392.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
391.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
389.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
388.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
387.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
385.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
383.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
382.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
382.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
381.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
381.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
378.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
375.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
374.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
370.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
367.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
366.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
365.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
364.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
362.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
362.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
360.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
359.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
359.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
359.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
358.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
352.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
351.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
350.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
349.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
346.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
345.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
344.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
340.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
339.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
337.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
336.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
336.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
334.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
333.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
333.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
332.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
326.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
326.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
324.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
324.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
323.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
322.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
321.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
317.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
315.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
313.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
313.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
312.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
311.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
311.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
310.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
310.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
309.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
308.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
308.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
306.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
304.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
304.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
299.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
298.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
295.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
295.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
293.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
293.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
292.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
291.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
290.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
288.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
288.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
288.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
287.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
286.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
284.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
283.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
282.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
279.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
279.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
276.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
273.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
272.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
269.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
268.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
268.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
264.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
264.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
264.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
261.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
260.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
259.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
259.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
257.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
255.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
254.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
254.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
252.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
252.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
249.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
247.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
247.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
246.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
246.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
244.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
244.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
241.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
240.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
240.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
238.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
238.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
236.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
236.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
236.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
235.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
234.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
232.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
231.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
229.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
229.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
229.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
228.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
228.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
227.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
225.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
224.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
224.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
221.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
221.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
220.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
220.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
219.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
218.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
217.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
216.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
215.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
215.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
214.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
212.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
211.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
210.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
210.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
210.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
209.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
206.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
206.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
206.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
206.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
204.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
203.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
203.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
203.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
203.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
202.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
201.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
200.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
200.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
199.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
199.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
199.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
198.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
198.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
196.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
193.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
193.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
193.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
192.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
192.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
191.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
191.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
190.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
190.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
189.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
189.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
189.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
188.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
188.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
187.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
187.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
186.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
185.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
184.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
183.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
183.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
181.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
180.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
179.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
179.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
178.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
178.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
178.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
178.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
177.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
177.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
176.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
176.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
175.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
174.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
174.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
171.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
169.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
169.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
168.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
168.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
168.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
167.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
165.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
165.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
164.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
163.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
163.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
162.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
161.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
161.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
159.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
159.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
158.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
156.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
156.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
155.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
154.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
154.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
153.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
153.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
152.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
150.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
149.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
148.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
147.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
146.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
145.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
145.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
145.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
145.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
144.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
143.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
143.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
143.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
142.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
142.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
141.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
141.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
141.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
140.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
139.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
139.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
138.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
138.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
137.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
137.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
134.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
132.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
132.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
132.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
131.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
131.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
129.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
128.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
128.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
127.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
127.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
127.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
126.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
126.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
125.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
125.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
123.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
122.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
122.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
122.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
121.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
121.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
120.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
119.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
118.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
116.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
115.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
115.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
114.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
112.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
112.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
112.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
111.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
111.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
110.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
110.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
110.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
109.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
109.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
108.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
108.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
108.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
108.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
108.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
106.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
106.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
106.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
104.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
103.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
102.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
101.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
101.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
100.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
99.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
98.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
98.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
98.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
98.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
98.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
97.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
97.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
95.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
95.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
94.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
91.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
90.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
89.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
89.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
88.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
88.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
86.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
86.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
86.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
85.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
84.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
84.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
83.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
83.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
82.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
81.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
80.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
79.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
78.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
78.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
77.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
76.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
73.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
71.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
71.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
68.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
68.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
66.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
66.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
64.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
62.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
62.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
62.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
61.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
61.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
60.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
58.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
57.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
56.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
56.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
56.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
55.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
55.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
55.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
53.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
52.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
51.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
51.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
50.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
50.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
46.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
46.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
45.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
44.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
44.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
43.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
43.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
38.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
37.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
37.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
32.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
32.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
30.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
29.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
28.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
27.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
27.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
27.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
25.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
25.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
25.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
25.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
24.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
23.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
22.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
20.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
20.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
19.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
18.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
17.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
17.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
15.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
13.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
12.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
12.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
11.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
10.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
10.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
9.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
8.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
7.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
5.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
3.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
3.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
3.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
3.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
2.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
2.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
2.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VCAM1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
347.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
1294.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
1057.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
1045.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
949.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
879.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
831.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
801.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
756.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
726.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
689.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
685.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
673.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
642.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
616.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
594.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
569.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
546.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
541.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
538.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
536.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
513.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
501.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
486.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
485.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
484.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
476.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
470.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
442.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
431.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
424.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
413.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
390.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
388.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
386.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
378.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
376.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
367.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
366.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
359.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
355.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
354.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
346.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
321.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
311.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
310.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
306.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
304.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
302.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
298.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
296.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
286.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
271.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
266.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
264.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
255.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
254.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
253.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
244.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
241.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
237.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
233.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
228.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
228.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
223.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
221.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
218.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
215.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
209.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
209.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
209.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
198.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
196.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
194.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
193.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
190.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
184.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
182.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
179.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
156.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
152.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
148.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
122.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
121.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
117.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
115.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
104.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
103.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
90.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
87.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
71.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
68.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
64.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
56.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
56.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
45.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
43.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
35.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VCAM1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
191.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
1661.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
1303.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
1087.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
998.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
792.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
726.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
714.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
677.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
629.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
595.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
593.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
579.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
558.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
550.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
522.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
509.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
507.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
496.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
456.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
444.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
441.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
431.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
429.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
424.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
419.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
412.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
411.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
406.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
404.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
395.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
393.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
389.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
384.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
384.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
382.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
380.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
378.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
378.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
377.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
371.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
362.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
358.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
357.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
350.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
346.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
344.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
343.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
338.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
336.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
334.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
334.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
328.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
322.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
320.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
318.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
316.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
312.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
312.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
310.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
305.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
305.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
304.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
301.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
300.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
295.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
292.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
291.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
284.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
282.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
278.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
277.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
277.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
275.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
260.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
255.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
252.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
249.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
249.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
249.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
248.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
247.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
243.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
243.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
242.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
236.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
236.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
234.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
233.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
227.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
225.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
224.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
222.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
221.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
220.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
220.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
219.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
217.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
217.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
217.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
208.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
207.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
205.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
201.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
200.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
198.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
198.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
197.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
195.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
190.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
187.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
186.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
185.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
182.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
181.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
180.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
179.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
178.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
176.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
174.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
172.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
170.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
167.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
166.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
165.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
163.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
155.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
153.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
153.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
152.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
151.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
150.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
147.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
147.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
145.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
140.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
138.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
137.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
133.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
132.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
127.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
125.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
124.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
123.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
123.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
122.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
121.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
120.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
119.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
119.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
118.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
117.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
116.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
114.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
113.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
111.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
110.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
109.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
109.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
109.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
107.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
106.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
105.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
104.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
104.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
103.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
103.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
102.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
101.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
101.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
100.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
97.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
94.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
92.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
90.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
89.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
89.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
88.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
86.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
86.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
85.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
84.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
83.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
83.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
82.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
82.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
80.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
80.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
79.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
78.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
73.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
72.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
69.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
69.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
69.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
68.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
66.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
66.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
64.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
64.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
64.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
63.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
63.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
62.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
62.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
60.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
59.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
57.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
57.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
57.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
55.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
54.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
54.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
51.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
51.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
51.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
50.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
44.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
42.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
42.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
42.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
41.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
39.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
39.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
39.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
38.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
36.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
35.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
35.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
35.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
35.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
33.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
32.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
32.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
31.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
29.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
28.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
26.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
25.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
25.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
25.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
24.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
24.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
24.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
23.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
23.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
23.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
23.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
22.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
21.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
20.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
20.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
16.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
16.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
15.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
13.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
12.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
10.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
9.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
8.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
8.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
8.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
7.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
6.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
6.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
6.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
4.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
3.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
3.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
3.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
3.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
2.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
2.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
0.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
2.4
CPT0076330003
Tumor
2.2
CPT0088480003
Tumor
2.0
CPT0012280003
Tumor
2.0
CPT0086360003
Tumor
1.5
CPT0065430003
Tumor
1.3
CPT0001220008
Tumor
1.2
CPT0071150004
Tumor
1.1
CPT0010110003
Tumor
1.1
CPT0009000003
Tumor
1.0
CPT0011410003
Tumor
1.0
CPT0087040003
Tumor
1.0
CPT0017410003
Tumor
1.0
CPT0088970003
Tumor
1.0
CPT0078830003
Tumor
1.0
CPT0015730003
Tumor
0.9
CPT0012370003
Tumor
0.9
CPT0014160003
Tumor
0.9
CPT0025050003
Tumor
0.9
CPT0092730003
Tumor
0.9
CPT0081880003
Tumor
0.9
CPT0006440003
Tumor
0.9
CPT0086820003
Tumor
0.9
CPT0000640003
Tumor
0.9
CPT0025230003
Tumor
0.9
CPT0001540009
Tumor
0.9
CPT0019990003
Tumor
0.8
CPT0015810003
Tumor
0.8
CPT0079230003
Tumor
0.8
CPT0064370003
Tumor
0.8
CPT0001180009
Tumor
0.8
CPT0025880003
Tumor
0.8
CPT0086030003
Tumor
0.8
CPT0077110003
Tumor
0.7
CPT0002350011
Tumor
0.7
CPT0026410003
Tumor
0.7
CPT0001500009
Tumor
0.7
CPT0079270003
Tumor
0.6
CPT0079410003
Tumor
0.6
CPT0089460004
Tumor
0.6
CPT0092160003
Tumor
0.6
CPT0078930003
Tumor
0.6
CPT0065810003
Tumor
0.5
CPT0024670003
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0012670003
Tumor
0.5
CPT0079380003
Tumor
0.5
CPT0065930003
Tumor
0.5
CPT0015910003
Tumor
0.4
CPT0081990003
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0025350003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0088900003
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0078800003
Tumor
0.4
CPT0088760003
Tumor
0.4
CPT0063630003
Tumor
0.4
CPT0010160003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0000870016
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0019130003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0081600003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0007320003
Tumor
-0.1
CPT0001260009
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0089020003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0077310003
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0076350001
Normal
-0.3
CPT0075170001
Normal
-0.4
CPT0086970003
Normal
-0.4
CPT0075570001
Normal
-0.4
CPT0088710001
Normal
-0.4
CPT0006530001
Normal
-0.5
CPT0012900004
Tumor
-0.5
CPT0013790003
Normal
-0.5
CPT0012290003
Normal
-0.5
CPT0023350003
Tumor
-0.5
CPT0078530001
Normal
-0.5
CPT0082010001
Normal
-0.5
CPT0010120001
Normal
-0.5
CPT0001350001
Normal
-0.5
CPT0092190003
Normal
-0.5
CPT0088920001
Normal
-0.6
CPT0012090003
Normal
-0.6
CPT0000890001
Normal
-0.6
CPT0066520001
Normal
-0.6
CPT0088570001
Normal
-0.6
CPT0089040001
Normal
-0.6
CPT0018250001
Normal
-0.6
CPT0025060001
Normal
-0.7
CPT0063640001
Normal
-0.7
CPT0069190001
Normal
-0.7
CPT0001270001
Normal
-0.7
CPT0065820001
Normal
-0.7
CPT0020130001
Normal
-0.7
CPT0024680001
Normal
-0.7
CPT0014450004
Tumor
-0.8
CPT0012570003
Normal
-0.8
CPT0012550003
Tumor
-0.8
CPT0069160003
Tumor
-0.8
CPT0014130001
Normal
-0.8
CPT0026420001
Normal
-0.8
CPT0069010001
Normal
-0.8
CPT0014470001
Normal
-0.8
CPT0012920003
Normal
-0.8
CPT0092310003
Normal
-0.8
CPT0017450001
Normal
-0.9
CPT0012080003
Tumor
-0.9
CPT0007470001
Normal
-0.9
CPT0088780001
Normal
-0.9
CPT0081620001
Normal
-0.9
CPT0000660001
Normal
-0.9
CPT0000790001
Normal
-0.9
CPT0006950001
Normal
-0.9
CPT0086830003
Normal
-0.9
CPT0088500001
Normal
-0.9
CPT0063330001
Normal
-0.9
CPT0079430001
Normal
-1.0
CPT0088550004
Tumor
-1.0
CPT0014350001
Normal
-1.0
CPT0001550001
Normal
-1.0
CPT0066430001
Normal
-1.0
CPT0079300001
Normal
-1.0
CPT0023360001
Normal
-1.0
CPT0086890003
Normal
-1.0
CPT0020020001
Normal
-1.0
CPT0092800003
Normal
-1.0
CPT0006730001
Normal
-1.1
CPT0087050003
Normal
-1.1
CPT0010170001
Normal
-1.1
CPT0088690003
Tumor
-1.1
CPT0019160001
Normal
-1.1
CPT0077140001
Normal
-1.1
CPT0065450001
Normal
-1.1
CPT0089480003
Normal
-1.1
CPT0012770003
Normal
-1.1
CPT0086370003
Normal
-1.1
CPT0001510001
Normal
-1.1
CPT0009020003
Normal
-1.2
CPT0088640003
Normal
-1.2
CPT0025610001
Normal
-1.2
CPT0092740003
Normal
-1.2
CPT0025920001
Normal
-1.2
CPT0012640003
Normal
-1.2
CPT0077500001
Normal
-1.2
CPT0064400001
Normal
-1.2
CPT0078840001
Normal
-1.2
CPT0079000001
Normal
-1.3
CPT0078670001
Normal
-1.3
CPT0078940001
Normal
-1.3
CPT0009080003
Normal
-1.3
CPT0002370001
Normal
-1.3
CPT0079510001
Normal
-1.3
CPT0023710001
Normal
-1.4
CPT0001230001
Normal
-1.4
CPT0007870001
Normal
-1.5
CPT0079180003
Tumor
-1.8
CPT0001340003
Tumor
-2.0
CPT0078660003
Tumor
-2.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
