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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SELENON is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
127.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
116.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
114.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
114.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
114.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
109.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
105.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
103.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
97.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
90.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
89.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
88.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
87.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
85.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
80.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
77.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
76.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
74.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
70.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
66.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
63.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
63.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
60.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
58.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
57.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
57.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
57.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
55.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
54.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
52.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
52.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
49.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
49.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
47.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
45.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
44.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
43.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
42.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
41.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
41.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
40.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
40.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
40.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
40.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
38.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
38.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
35.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
35.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
35.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
34.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
33.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
32.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
30.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
29.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
27.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
27.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
26.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
25.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
24.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
19.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
19.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
18.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
17.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SELENON is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
110.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
107.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
106.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
105.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
97.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
94.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
92.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
92.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
89.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
88.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
82.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
80.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
78.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
77.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
76.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
76.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
74.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
73.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
73.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
72.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
72.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
72.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
72.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
71.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
71.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
71.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
70.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
69.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
69.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
69.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
67.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
67.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
66.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
66.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
66.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
66.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
66.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
63.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
63.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
63.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
63.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
63.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
63.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
62.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
62.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
62.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
62.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
61.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
61.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
61.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
61.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
61.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
61.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
61.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
61.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
61.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
60.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
60.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
60.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
60.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
60.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
59.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
59.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
59.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
59.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
58.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
58.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
57.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
56.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
56.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
56.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
55.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
55.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
55.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
55.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
55.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
55.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
55.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
55.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
55.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
54.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
54.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
54.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
54.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
54.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
54.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
54.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
53.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
53.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
53.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
53.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
53.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
53.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
53.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
53.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
53.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
52.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
52.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
52.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
52.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
52.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
52.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
52.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
51.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
51.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
51.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
50.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
50.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
50.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
50.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
50.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
50.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
50.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
50.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
50.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
49.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
49.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
49.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
49.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
49.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
49.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
49.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
49.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
48.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
48.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
48.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
48.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
48.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
48.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
48.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
48.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
47.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
47.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
47.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
47.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
47.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
47.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
47.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
47.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
47.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
46.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
46.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
46.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
46.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
46.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
46.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
46.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
46.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
45.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
45.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
45.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
45.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
45.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
45.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
45.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
44.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
44.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
44.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
44.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
44.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
44.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
44.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
44.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
44.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
44.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
43.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
43.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
43.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
43.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
43.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
43.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
43.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
43.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
43.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
43.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
43.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
43.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
43.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
43.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
42.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
42.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
42.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
42.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
42.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
42.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
42.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
42.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
41.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
41.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
41.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
41.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
41.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
41.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
41.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
41.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
41.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
41.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
41.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
41.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
41.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
41.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
41.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
41.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
41.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
41.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
41.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
41.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
40.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
40.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
40.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
40.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
40.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
40.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
40.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
40.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
40.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
40.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
40.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
40.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
40.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
40.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
40.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
40.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
40.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
39.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
39.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
39.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
39.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
39.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
39.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
39.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
39.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
39.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
39.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
39.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
39.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
38.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
38.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
38.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
38.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
38.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
38.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
38.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
38.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
38.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
38.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
38.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
38.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
37.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
37.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
37.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
37.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
37.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
37.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
37.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
37.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
37.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
37.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
37.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
37.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
36.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
36.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
36.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
36.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
36.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
36.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
36.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
36.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
36.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
36.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
36.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
36.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
35.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
35.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
35.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
35.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
35.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
35.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
35.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
35.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
35.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
35.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
35.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
35.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
34.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
34.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
34.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
34.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
34.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
34.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
34.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
34.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
34.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
34.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
34.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
34.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
34.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
34.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
34.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
34.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
34.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
33.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
33.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
33.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
33.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
33.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
33.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
33.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
33.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
33.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
33.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
33.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
33.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
33.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
33.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
33.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
33.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
33.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
33.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
32.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
32.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
32.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
32.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
32.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
32.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
32.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
32.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
32.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
32.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
32.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
32.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
32.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
31.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
31.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
31.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
31.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
31.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
31.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
31.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
31.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
31.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
31.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
31.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
31.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
31.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
30.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
30.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
30.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
30.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
30.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
30.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
30.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
30.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
30.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
30.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
30.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
30.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
30.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
30.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
30.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
30.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
30.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
30.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
29.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
29.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
29.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
29.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
29.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
29.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
29.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
29.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
29.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
29.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
29.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
29.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
29.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
29.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
28.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
28.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
28.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
28.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
28.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
28.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
28.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
28.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
28.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
28.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
28.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
27.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
27.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
27.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
27.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
27.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
27.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
27.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
27.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
27.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
27.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
26.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
26.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
26.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
26.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
26.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
26.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
26.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
26.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
26.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
25.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
25.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
25.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
25.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
25.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
25.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
25.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
25.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
25.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
25.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
25.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
24.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
24.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
24.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
24.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
24.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
24.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
24.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
24.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
24.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
23.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
23.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
23.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
23.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
23.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
23.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
23.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
23.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
22.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
22.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
22.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
22.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
22.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
22.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
22.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
22.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
22.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
22.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
22.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
22.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
22.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
22.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
22.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
22.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
22.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
22.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
22.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
22.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
21.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
21.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
21.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
21.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
21.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
21.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
21.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
21.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
21.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
21.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
21.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
20.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
20.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
20.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
20.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
20.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
20.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
19.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
19.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
19.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
18.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
18.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
18.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
18.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
18.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
18.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
18.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
17.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
17.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
17.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
17.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
17.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
17.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
16.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
16.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
16.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
16.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
15.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
15.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
15.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
15.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
15.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
15.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
14.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
13.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
12.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
11.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
10.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
10.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
10.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
9.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
8.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SELENON is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
74.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
64.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
63.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
63.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
58.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
57.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
55.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
50.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
47.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
46.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
46.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
46.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
44.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
44.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
43.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
43.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
43.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
42.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
41.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
41.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
40.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
39.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
39.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
38.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
37.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
37.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
37.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
37.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
37.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
37.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
37.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
36.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
36.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
36.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
36.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
36.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
35.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
35.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
35.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
35.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
34.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
34.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
33.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
33.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
33.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
33.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
33.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
33.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
33.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
33.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
32.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
32.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
31.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
31.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
30.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
30.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
30.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
30.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
30.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
29.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
29.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
28.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
28.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
27.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
27.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
26.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
25.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
25.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
24.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
24.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
24.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
23.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
23.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
23.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
23.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
23.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
23.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
23.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
22.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
22.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
22.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
22.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
22.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
21.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
21.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
20.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
19.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
19.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
19.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
19.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
19.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
18.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
15.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SELENON is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
133.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
119.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
116.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
105.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
104.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
97.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
85.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
84.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
83.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
81.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
80.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
79.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
75.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
75.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
74.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
73.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
72.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
72.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
71.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
70.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
70.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
67.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
66.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
63.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
60.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
60.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
60.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
59.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
58.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
58.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
58.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
57.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
56.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
56.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
56.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
55.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
54.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
54.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
54.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
54.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
53.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
53.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
53.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
52.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
52.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
51.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
50.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
50.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
49.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
49.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
48.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
47.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
47.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
47.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
46.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
45.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
44.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
44.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
43.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
43.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
43.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
43.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
42.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
42.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
42.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
42.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
41.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
41.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
41.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
41.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
41.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
41.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
41.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
41.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
41.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
41.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
40.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
40.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
40.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
39.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
39.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
39.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
39.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
39.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
39.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
39.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
37.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
37.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
37.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
37.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
36.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
36.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
36.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
36.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
36.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
36.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
35.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
35.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
35.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
35.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
35.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
34.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
34.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
34.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
34.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
34.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
34.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
34.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
33.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
33.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
33.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
33.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
32.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
32.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
32.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
32.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
31.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
31.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
31.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
31.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
31.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
30.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
30.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
30.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
30.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
30.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
30.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
30.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
30.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
30.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
29.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
29.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
29.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
29.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
28.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
28.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
28.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
28.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
28.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
28.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
28.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
28.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
28.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
27.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
27.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
27.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
27.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
27.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
27.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
27.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
26.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
26.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
26.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
26.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
26.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
26.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
25.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
25.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
25.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
25.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
25.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
24.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
24.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
24.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
24.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
24.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
24.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
23.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
23.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
23.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
23.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
23.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
23.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
23.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
23.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
22.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
22.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
22.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
22.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
22.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
22.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
22.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
22.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
22.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
22.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
22.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
21.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
21.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
21.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
21.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
21.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
21.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
21.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
21.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
21.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
20.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
20.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
20.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
20.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
20.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
20.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
20.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
20.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
19.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
19.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
19.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
19.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
19.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
19.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
19.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
19.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
18.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
18.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
18.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
18.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
18.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
18.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
17.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
17.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
17.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
17.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
17.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
17.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
17.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
17.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
17.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
16.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
16.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
16.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
16.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
16.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
15.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
15.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
15.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
15.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
14.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
14.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
14.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
14.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
14.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
13.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
13.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
12.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
12.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
12.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
12.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
12.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
11.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
11.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
11.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
10.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
10.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
9.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
9.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
9.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
9.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
8.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
6.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
5.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0086030003
Tumor
0.9
CPT0088780001
Normal
0.8
CPT0065750003
Tumor
0.8
CPT0077310003
Tumor
0.8
CPT0078510003
Tumor
0.7
CPT0092290003
Tumor
0.6
CPT0017850003
Tumor
0.6
CPT0012670003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0089020003
Tumor
0.5
CPT0088760003
Tumor
0.5
CPT0092310003
Normal
0.4
CPT0001230001
Normal
0.4
CPT0063640001
Normal
0.4
CPT0015730003
Tumor
0.4
CPT0006530001
Normal
0.4
CPT0087040003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0002370001
Normal
0.3
CPT0012180003
Tumor
0.3
CPT0066430001
Normal
0.3
CPT0088710001
Normal
0.3
CPT0014160003
Tumor
0.3
CPT0092190003
Normal
0.2
CPT0064370003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0014350001
Normal
0.2
CPT0069000003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0007470001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0088970003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0006440003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0012770003
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0012570003
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0079180003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0011240003
Tumor
0.0
CPT0089040001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0023350003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0087050003
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0025230003
Tumor
-0.2
CPT0012090003
Normal
-0.2
CPT0019130003
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0064400001
Normal
-0.2
CPT0079410003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0024670003
Tumor
-0.3
CPT0079230003
Tumor
-0.3
CPT0025050003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0078990003
Tumor
-0.4
CPT0085670003
Tumor
-0.4
CPT0019990003
Tumor
-0.4
CPT0086970003
Normal
-0.4
CPT0023360001
Normal
-0.5
CPT0079430001
Normal
-0.5
CPT0078800003
Tumor
-0.6
CPT0001220008
Tumor
-0.6
CPT0001510001
Normal
-1.5
CPT0086370003
Normal
-1.9
CPT0092790003
Tumor
-2.0
CPT0001500009
Tumor
-2.4
CPT0086360003
Tumor
-2.6
CPT0092800003
Normal
-2.6
CPT0065820001
Normal
-3.4
CPT0065810003
Tumor
-3.7
CPT0000790001
Normal
N/A
CPT0088570001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0025170003
Tumor
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0075720003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0001550001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0009000003
Tumor
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0025110003
Tumor
N/A
CPT0009020003
Normal
N/A
CPT0077490003
Tumor
N/A
CPT0066520001
Normal
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0065450001
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0025350003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0075560003
Tumor
N/A
CPT0001540009
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0081880003
Tumor
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
