Expression of SELENON in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

SELENON is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 18.6

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

18.2

Number of samples

362

Samples

Sample	Description	TPM
TCGA-CC-A7IJ-01A	0 years, male, asian, stage:Stage II, alive, 382 days	100.3
TCGA-G3-AAV7-01A	0 years, male, asian, stage:Stage II, alive, 361 days	74.5
TCGA-DD-A3A6-01A	0 years, female, white, stage:Stage II, dead, 3258 days	68.3
TCGA-DD-A114-01A	0 years, male, black or african american, stage:Stage II, dead, 1149 days	65.6
TCGA-YA-A8S7-01A	0 years, male, white, stage:Stage IIIA, dead, 412 days	62.0
TCGA-CC-5260-01A	0 years, female, asian, stage:Stage IIIC, dead, 87 days	56.2
TCGA-CC-5263-01A	0 years, male, asian, stage:Stage IIIA, dead, 129 days	55.6
TCGA-WX-AA44-01A	0 years, female, white, stage:Stage I, alive, 615 days	52.8
TCGA-ED-A7PX-01A	0 years, female, asian, stage:Stage II, alive, 6 days	52.0
TCGA-CC-5261-01A	0 years, male, asian, stage:Stage II, dead, 97 days	48.8
TCGA-G3-A7M6-01A	0 years, female, white, stage:Stage I, alive, 632 days	48.4
TCGA-ZP-A9D2-01A	0 years, male, white, stage:'--, dead, 765 days	48.0
TCGA-ED-A97K-01A	0 years, male, asian, stage:Stage IIIA, alive, 6 days	47.3
TCGA-CC-A3M9-01A	0 years, male, asian, stage:Stage IIIA, dead, 300 days	45.2
TCGA-DD-AACH-01A	0 years, male, asian, stage:Stage II, dead, 195 days	44.2
TCGA-DD-AA3A-01A	0 years, female, white, stage:Stage I, dead, 410 days	43.4
TCGA-DD-AAD1-01A	0 years, female, asian, stage:Stage I, alive, 564 days	42.2
TCGA-DD-AAD5-01A	0 years, male, asian, stage:Stage I, alive, 1345 days	41.0
TCGA-CC-A1HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 101 days	40.1
TCGA-BC-A8YO-01A	0 years, female, white, stage:Stage IIIC, alive, 562 days	40.1
TCGA-DD-AADW-01A	0 years, male, asian, stage:Stage I, alive, 587 days	37.7
TCGA-G3-A25Y-01A	0 years, female, asian, stage:Stage I, dead, 452 days	37.6
TCGA-DD-AAE6-01A	0 years, female, asian, stage:Stage I, alive, 141 days	37.5
TCGA-CC-5264-01A	0 years, male, asian, stage:Stage IIIA, dead, 102 days	36.6
TCGA-DD-A4NS-01A	0 years, female, white, stage:Stage I, dead, 2456 days	36.5
TCGA-EP-A2KA-01A	0 years, female, white, stage:Stage IIIA, dead, 627 days	36.3
TCGA-ED-A66Y-01A	0 years, female, asian, stage:Stage IIIA, dead, 296 days	35.8
TCGA-DD-A73E-01A	0 years, male, white, stage:Stage I, alive, 44 days	35.5
TCGA-UB-A7MB-01A	0 years, male, white, stage:Stage II, alive, 601 days	35.0
TCGA-CC-A3MA-01A	0 years, male, asian, stage:Stage IIIA, dead, 303 days	34.4
TCGA-RC-A6M5-01A	0 years, female, white, stage:Stage IVA, alive, 15 days	32.5
TCGA-GJ-A3OU-01A	0 years, male, white, stage:Stage I, alive, 879 days	32.5
TCGA-FV-A3I1-01A	0 years, female, white, stage:Stage II, dead, 247 days	32.4
TCGA-DD-A4NB-01A	0 years, male, white, stage:Stage I, alive, 989 days	32.0
TCGA-DD-A1EH-01A	0 years, male, white, stage:Stage III, alive, 1495 days	31.6
TCGA-FV-A3I0-01A	0 years, female, white, stage:Stage II, alive, 848 days	31.6
TCGA-UB-A7MD-01A	0 years, male, black or african american, stage:Stage I, dead, 52 days	31.5
TCGA-DD-A4NN-01A	0 years, female, white, stage:Stage I, dead, 899 days	31.0
TCGA-DD-AACL-01A	0 years, female, asian, stage:Stage I, dead, 107 days	30.8
TCGA-CC-A5UD-01A	0 years, male, asian, stage:Stage IIIA, dead, 304 days	30.5
TCGA-DD-A4NR-01A	0 years, female, white, stage:Stage I, dead, 9 days	30.5
TCGA-5R-AA1D-01A	0 years, female, white, stage:Stage IIIA, alive, 449 days	30.1
TCGA-ED-A627-01A	0 years, male, white, stage:Stage I, alive, 423 days	29.8
TCGA-WQ-A9G7-01A	0 years, female, white, stage:'--, alive, 30 days	29.7
TCGA-DD-AACU-01A	0 years, male, asian, stage:Stage I, alive, 1567 days	29.6
TCGA-BC-A10Q-01A	0 years, female, white, stage:'--, dead, 1135 days	29.6
TCGA-DD-AAVV-01A	0 years, male, asian, stage:Stage II, alive, 2455 days	29.4
TCGA-DD-AACZ-01A	0 years, female, asian, stage:Stage I, dead, 171 days	29.2
TCGA-CC-5258-01A	0 years, male, asian, stage:Stage II, dead, 129 days	29.0
TCGA-QA-A7B7-01A	0 years, male, black or african american, stage:Stage II, alive, 94 days	28.8
TCGA-FV-A3R3-01A	0 years, female, white, stage:Stage I, dead, 366 days	28.7
TCGA-DD-A4ND-01A	0 years, female, white, stage:Stage I, alive, 2746 days	28.5
TCGA-CC-A8HU-01A	0 years, female, asian, stage:Stage IIIA, dead, 344 days	28.1
TCGA-2Y-A9GS-01A	0 years, male, white, stage:'--, dead, 724 days	28.0
TCGA-5C-AAPD-01A	0 years, male, asian, stage:Stage II, alive, 20 days	27.8
TCGA-G3-A7M9-01A	0 years, male, white, stage:Stage IIIB, dead, 56 days	27.7
TCGA-ZP-A9CV-01A	0 years, male, white, stage:'--, dead, 1088 days	27.6
TCGA-ED-A5KG-01A	0 years, female, asian, stage:Stage II, alive, 854 days	27.5
TCGA-BC-A3KG-01A	0 years, female, white, stage:Stage II, alive, 680 days	27.4
TCGA-CC-5262-01A	0 years, male, asian, stage:Stage IIIC, dead, 103 days	27.4
TCGA-BC-A10R-01A	0 years, female, white, stage:'--, dead, 308 days	26.9
TCGA-2Y-A9GX-01A	0 years, male, white, stage:Stage I, alive, 2442 days	26.7
TCGA-ED-A66X-01A	0 years, male, asian, stage:Stage IIIA, alive, 406 days	26.6
TCGA-BD-A3EP-01A	0 years, female, black or african american, stage:Stage I, alive, 409 days	26.4
TCGA-CC-A8HS-01A	0 years, male, asian, stage:Stage IIIC, dead, 300 days	26.3
TCGA-5C-A9VH-01A	0 years, male, white, stage:Stage I, alive, 322 days	26.1
TCGA-ED-A82E-01A	0 years, female, asian, stage:Stage IIIA, alive, 408 days	25.7
TCGA-DD-A1EC-01A	0 years, female, white, stage:Stage I, alive, 602 days	25.5
TCGA-DD-AAVS-01A	0 years, male, asian, stage:Stage I, alive, 1823 days	25.4
TCGA-HP-A5N0-01A	0 years, female, stage:'--, dead, 752 days	25.4
TCGA-DD-A4NH-01A	0 years, female, white, stage:Stage IIIB, alive, 917 days	25.2
TCGA-CC-A7IK-01A	0 years, male, asian, stage:Stage IIIA, dead, 262 days	24.9
TCGA-UB-A7MA-01A	0 years, female, white, stage:Stage II, alive, 848 days	24.7
TCGA-UB-AA0U-01A	0 years, male, white, stage:Stage II, alive, 327 days	24.6
TCGA-CC-A3MC-01A	0 years, male, asian, stage:Stage IIIA, alive, 363 days	24.5
TCGA-FV-A3R2-01A	0 years, male, white, stage:Stage I, dead, 194 days	24.4
TCGA-DD-A1EG-01A	0 years, male, white, stage:Stage I, dead, 1372 days	24.3
TCGA-RC-A7SH-01A	0 years, male, asian, stage:Stage II, alive, 468 days	24.1
TCGA-GJ-A6C0-01A	0 years, female, white, stage:Stage II, dead, 31 days	24.1
TCGA-G3-A25T-01A	0 years, female, white, stage:Stage IIIA, alive, 1553 days	24.1
TCGA-DD-A39Y-01A	0 years, male, asian, stage:Stage I, dead, 171 days	24.0
TCGA-DD-A1EF-01A	0 years, female, white, stage:Stage I, dead, 394 days	24.0
TCGA-K7-AAU7-01A	0 years, male, white, stage:Stage II, alive, 359 days	23.9
TCGA-DD-AADL-01A	0 years, male, asian, stage:Stage I, alive, 636 days	23.9
TCGA-2Y-A9GY-01A	0 years, female, white, stage:Stage II, dead, 757 days	23.1
TCGA-DD-A4NV-01A	0 years, male, white, stage:Stage IIIA, alive, 2398 days	22.8
TCGA-DD-A4NQ-01A	0 years, male, white, stage:Stage II, dead, 373 days	22.8
TCGA-DD-A118-01A	0 years, female, white, stage:Stage II, alive, 3437 days	22.7
TCGA-DD-AAE0-01A	0 years, female, asian, stage:Stage IIIA, alive, 555 days	22.6
TCGA-BC-A3KF-01A	0 years, female, white, stage:Stage I, alive, 8 days	22.6
TCGA-DD-AACS-01A	0 years, male, asian, stage:Stage I, alive, 1804 days	22.4
TCGA-CC-A8HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 140 days	22.4
TCGA-DD-AACN-01A	0 years, male, asian, stage:Stage I, alive, 1302 days	22.2
TCGA-DD-A1EA-01A	0 years, male, asian, stage:Stage II, alive, 2415 days	22.2
TCGA-2Y-A9H5-01A	0 years, female, white, stage:Stage I, dead, 555 days	22.0
TCGA-DD-AAVW-01A	0 years, male, asian, stage:Stage I, alive, 2317 days	22.0
TCGA-PD-A5DF-01A	0 years, female, white, stage:Stage IIIB, dead, 639 days	22.0
TCGA-FV-A2QR-01A	0 years, male, white, stage:Stage I, dead, 581 days	21.9
TCGA-DD-A4NE-01A	0 years, female, white, stage:Stage IIIA, dead, 660 days	21.8
TCGA-CC-A7II-01A	0 years, male, asian, stage:Stage IIIA, alive, 399 days	21.6
TCGA-ED-A4XI-01A	0 years, male, asian, stage:Stage II, alive, 819 days	21.5
TCGA-2Y-A9H0-01A	0 years, male, white, stage:Stage IIIA, alive, 3675 days	21.4
TCGA-DD-A115-01A	0 years, male, white, stage:Stage IIIA, dead, 2542 days	21.4
TCGA-DD-A3A9-01A	0 years, female, white, stage:Stage IVB, dead, 931 days	21.2
TCGA-2Y-A9H2-01A	0 years, female, white, stage:Stage I, alive, 1731 days	21.1
TCGA-BC-A112-01A	0 years, male, white, stage:'--, dead, 153 days	20.9
TCGA-DD-AAD3-01A	0 years, male, asian, stage:Stage I, alive, 1295 days	20.9
TCGA-DD-A1EI-01A	0 years, male, asian, stage:Stage I, alive, 183 days	20.8
TCGA-DD-A4NA-01A	0 years, female, white, stage:Stage IIIC, alive, 1008 days	20.7
TCGA-WJ-A86L-01A	0 years, female, white, stage:Stage I, alive, 345 days	20.6
TCGA-MR-A8JO-01A	0 years, male, white, stage:Stage I, alive, 330 days	20.5
TCGA-DD-A39W-01A	0 years, female, white, stage:Stage III, dead, 827 days	20.3
TCGA-DD-AADI-01A	0 years, female, asian, stage:Stage I, alive, 1085 days	20.3
TCGA-DD-A1EE-01A	0 years, male, white, stage:Stage IIIA, dead, 349 days	20.3
TCGA-BC-A10W-01A	0 years, male, asian, stage:'--, dead, 91 days	20.2
TCGA-T1-A6J8-01A	0 years, male, white, stage:'--, alive, 23 days	20.1
TCGA-DD-A1EL-01A	0 years, male, black or african american, stage:Stage II, dead, 415 days	20.1
TCGA-CC-A8HV-01A	0 years, female, asian, stage:Stage II, dead, 279 days	19.8
TCGA-DD-A4NJ-01A	0 years, female, white, stage:Stage II, alive, 928 days	19.7
TCGA-BC-A10Z-01A	0 years, female, white, stage:Stage I, dead, 34 days	19.7
TCGA-BC-A217-01A	0 years, female, white, stage:Stage II, dead, 1397 days	19.5
TCGA-DD-AACT-01A	0 years, female, asian, stage:Stage I, alive, 1562 days	19.5
TCGA-CC-A5UE-01A	0 years, male, asian, stage:Stage IIIB, dead, 272 days	19.5
TCGA-2Y-A9H6-01A	0 years, female, white, stage:Stage I, alive, 357 days	19.4
TCGA-GJ-A9DB-01A	0 years, male, white, stage:Stage I, dead, 67 days	19.3
TCGA-G3-A25X-01A	0 years, male, asian, stage:Stage II, alive, 1779 days	19.2
TCGA-KR-A7K8-01A	0 years, male, stage:Stage I, alive, 906 days	19.0
TCGA-BC-A10Y-01A	0 years, male, white, stage:'--, dead, 711 days	19.0
TCGA-5R-AAAM-01A	0 years, female, white, stage:Stage II, dead, 46 days	19.0
TCGA-KR-A7K0-01A	0 years, male, white, stage:Stage I, dead, 65 days	19.0
TCGA-DD-AAD2-01A	0 years, male, asian, stage:Stage I, alive, 658 days	18.9
TCGA-DD-AACQ-01A	0 years, male, asian, stage:Stage II, dead, 432 days	18.9
TCGA-BC-A5W4-01A	0 years, male, white, stage:Stage IIIA, dead, 547 days	18.8
TCGA-UB-A7MF-01A	0 years, male, white, stage:Stage IIIA, dead, 214 days	18.6
TCGA-XR-A8TE-01A	0 years, male, white, stage:Stage IIIA, alive, 925 days	18.6
TCGA-ZP-A9D1-01A	0 years, female, white, stage:'--, alive, 21 days	18.5
TCGA-KR-A7K2-01A	0 years, male, white, stage:Stage I, alive, 829 days	18.5
TCGA-DD-AADB-01A	0 years, male, asian, stage:Stage I, alive, 1242 days	18.4
TCGA-XR-A8TG-01A	0 years, male, white, stage:Stage I, alive, 898 days	18.4
TCGA-ZP-A9D0-01A	0 years, female, black or african american, stage:'--, alive, 1091 days	18.3
TCGA-5C-A9VG-01A	0 years, male, white, stage:Stage II, alive, 328 days	18.3
TCGA-ZP-A9CZ-01A	0 years, male, asian, stage:'--, alive, 706 days	18.3
TCGA-G3-A3CG-01A	0 years, male, white, stage:Stage I, alive, 673 days	18.2
TCGA-DD-AADV-01A	0 years, male, asian, stage:Stage I, alive, 574 days	18.2
TCGA-G3-A5SM-01A	0 years, male, white, stage:Stage II, alive, 520 days	18.2
TCGA-DD-A4NO-01A	0 years, male, white, stage:Stage I, alive, 2245 days	18.0
TCGA-HP-A5MZ-01A	0 years, male, stage:Stage I, dead, 91 days	17.8
TCGA-CC-A7IG-01A	0 years, male, asian, stage:Stage II, dead, 299 days	17.8
TCGA-BW-A5NO-01A	0 years, male, black or african american, stage:Stage IIIA, alive, 20 days	17.4
TCGA-G3-A5SJ-01A	0 years, male, white, stage:Stage I, alive, 698 days	17.3
TCGA-2Y-A9HB-01A	0 years, male, stage:Stage I, alive, 260 days	17.2
TCGA-DD-AAVP-01A	0 years, male, asian, stage:Stage I, alive, 2752 days	17.2
TCGA-2Y-A9H8-01A	0 years, female, white, stage:'--, dead, 633 days	17.2
TCGA-ZP-A9CY-01A	0 years, female, white, stage:'--, alive, 782 days	17.1
TCGA-ZS-A9CD-01A	0 years, male, white, stage:Stage II, dead, 1386 days	17.1
TCGA-EP-A3RK-01A	0 years, male, white, stage:Stage IIIA, alive, 363 days	16.9
TCGA-DD-AAEG-01A	0 years, female, asian, stage:Stage I, alive, 719 days	16.8
TCGA-DD-AAE9-01A	0 years, male, asian, stage:Stage I, alive, 722 days	16.8
TCGA-G3-A25V-01A	0 years, male, white, stage:Stage I, alive, 860 days	16.5
TCGA-UB-A7ME-01A	0 years, male, asian, stage:Stage I, alive, 486 days	16.5
TCGA-2Y-A9HA-01A	0 years, male, white, stage:Stage II, dead, 36 days	16.5
TCGA-2Y-A9GV-01A	0 years, female, white, stage:Stage I, dead, 2532 days	16.4
TCGA-DD-AACP-01A	0 years, male, asian, stage:Stage I, alive, 415 days	16.3
TCGA-ED-A7PY-01A	0 years, female, asian, stage:Stage II, alive, 390 days	16.3
TCGA-FV-A495-01A	0 years, female, white, stage:Stage II, alive, 1 days	16.2
TCGA-DD-AADD-01A	0 years, male, asian, stage:Stage I, alive, 1231 days	16.2
TCGA-BC-A216-01A	0 years, female, white, stage:Stage IIIA, alive, 1351 days	16.1
TCGA-ED-A7XP-01A	0 years, female, asian, stage:Stage II, alive, 400 days	16.1
TCGA-ED-A8O6-01A	0 years, female, asian, stage:Stage IIIA, dead, 56 days	16.0
TCGA-DD-A113-01A	0 years, female, white, stage:Stage II, alive, 2425 days	16.0
TCGA-LG-A6GG-01A	0 years, female, white, stage:Stage II, alive, 387 days	15.9
TCGA-MI-A75I-01A	0 years, male, black or african american, stage:'--, alive, 630 days	15.9
TCGA-XR-A8TD-01A	0 years, female, white, stage:Stage IIIB, alive, 1030 days	15.8
TCGA-2Y-A9GW-01A	0 years, male, white, stage:Stage I, dead, 1271 days	15.6
TCGA-CC-A3MB-01A	0 years, male, asian, stage:Stage IIIA, dead, 315 days	15.5
TCGA-DD-A1EJ-01A	0 years, female, white, stage:Stage IIIC, dead, 1005 days	15.4
TCGA-DD-AAC8-01A	0 years, male, asian, stage:Stage I, dead, 16 days	15.3
TCGA-DD-AAW0-01A	0 years, male, asian, stage:Stage I, alive, 2015 days	15.3
TCGA-DD-AAVQ-01A	0 years, male, asian, stage:Stage I, alive, 2728 days	15.2
TCGA-G3-AAV6-01A	0 years, female, white, stage:Stage IIIA, dead, 65 days	15.2
TCGA-G3-A6UC-01A	0 years, male, white, stage:Stage IIIB, alive, 671 days	15.2
TCGA-DD-AAE2-01A	0 years, male, asian, stage:Stage I, alive, 638 days	15.2
TCGA-CC-A7IH-01A	0 years, male, asian, stage:Stage IIIA, alive, 365 days	15.1
TCGA-DD-AACK-01A	0 years, male, asian, stage:Stage I, alive, 9 days	15.0
TCGA-DD-A11D-01A	0 years, female, white, stage:Stage I, dead, 1560 days	15.0
TCGA-DD-AAEA-01A	0 years, male, asian, stage:Stage I, alive, 575 days	15.0
TCGA-G3-A3CH-01A	0 years, male, asian, stage:Stage IIIA, alive, 780 days	15.0
TCGA-DD-A11B-01A	0 years, male, white, stage:Stage I, dead, 14 days	14.9
TCGA-DD-A73F-01A	0 years, female, white, stage:Stage I, alive, 1085 days	14.9
TCGA-BD-A3ER-01A	0 years, male, white, stage:Stage II, alive, 1115 days	14.9
TCGA-ED-A8O5-01A	0 years, female, asian, stage:Stage IIIA, alive, 406 days	14.8
TCGA-DD-AAEK-01A	0 years, male, asian, stage:Stage II, alive, 1067 days	14.8
TCGA-UB-A7MC-01A	0 years, male, white, stage:Stage IIIA, alive, 500 days	14.7
TCGA-MI-A75E-01A	0 years, male, white, stage:Stage IIIC, alive, 507 days	14.7
TCGA-DD-AACX-01A	0 years, male, asian, stage:Stage II, alive, 170 days	14.6
TCGA-O8-A75V-01A	0 years, male, stage:Stage I, alive, 538 days	14.6
TCGA-UB-AA0V-01A	0 years, female, white, stage:Stage I, alive, 314 days	14.3
TCGA-DD-A1EK-01A	0 years, female, white, stage:Stage IVB, dead, 558 days	14.3
TCGA-2Y-A9GZ-01A	0 years, female, white, stage:Stage II, dead, 848 days	14.1
TCGA-EP-A2KC-01A	0 years, male, black or african american, stage:Stage I, dead, 19 days	14.0
TCGA-BD-A2L6-01A	0 years, male, white, stage:'--, alive, 1363 days	14.0
TCGA-4R-AA8I-01A	0 years, male, white, stage:Stage II, dead, 262 days	13.9
TCGA-DD-AAVR-01A	0 years, male, asian, stage:Stage I, alive, 2513 days	13.9
TCGA-K7-A5RG-01A	0 years, male, black or african american, stage:Stage I, alive, 519 days	13.9
TCGA-DD-AAEE-01A	0 years, male, asian, stage:Stage I, alive, 810 days	13.7
TCGA-BC-A10X-01A	0 years, female, white, stage:Stage IIIA, dead, 770 days	13.7
TCGA-FV-A2QQ-01A	0 years, male, white, stage:Stage I, alive, 729 days	13.5
TCGA-K7-A6G5-01A	0 years, male, white, stage:Stage I, alive, 512 days	13.4
TCGA-FV-A23B-01A	0 years, female, white, stage:Stage II, dead, 1852 days	13.4
TCGA-2Y-A9GT-01A	0 years, male, white, stage:Stage I, dead, 1624 days	13.4
TCGA-DD-AAVZ-01A	0 years, male, asian, stage:Stage I, alive, 1900 days	13.3
TCGA-BC-A10S-01A	0 years, male, white, stage:'--, dead, 1423 days	13.3
TCGA-CC-A5UC-01A	0 years, male, asian, stage:Stage IIIA, dead, 347 days	13.3
TCGA-DD-A73A-01A	0 years, male, white, stage:Stage I, alive, 728 days	13.3
TCGA-MI-A75C-01A	0 years, male, white, stage:Stage I, alive, 291 days	13.2
TCGA-DD-AAEH-01A	0 years, male, asian, stage:Stage I, alive, 784 days	13.1
TCGA-DD-AACW-01A	0 years, male, asian, stage:Stage I, alive, 1424 days	13.1
TCGA-DD-AACA-01A	0 years, male, asian, stage:Stage I, alive, 2301 days	13.0
TCGA-RC-A7S9-01A	0 years, female, asian, stage:Stage I, alive, 640 days	13.0
TCGA-DD-AAD8-01A	0 years, female, asian, stage:Stage I, alive, 1219 days	12.8
TCGA-XR-A8TC-01A	0 years, female, white, stage:Stage I, alive, 1339 days	12.8
TCGA-G3-A3CI-01A	0 years, male, white, stage:Stage I, alive, 180 days	12.8
TCGA-G3-AAV2-01A	0 years, male, white, stage:Stage I, alive, 372 days	12.8
TCGA-DD-AADY-01A	0 years, female, asian, stage:Stage I, alive, 555 days	12.8
TCGA-ZS-A9CF-01A	0 years, male, white, stage:Stage II, alive, 2412 days	12.8
TCGA-3K-AAZ8-01A	0 years, male, black or african american, stage:Stage IIIB, alive, 396 days	12.7
TCGA-G3-A7M8-01A	0 years, male, asian, stage:Stage I, alive, 430 days	12.6
TCGA-ED-A7XO-01A	0 years, male, asian, stage:Stage IIIA, alive, 427 days	12.5
TCGA-DD-AADJ-01A	0 years, female, asian, stage:Stage I, alive, 1066 days	12.5
TCGA-DD-A3A8-01A	0 years, male, white, stage:Stage II, dead, 11 days	12.5
TCGA-BC-A10T-01A	0 years, male, white, stage:'--, dead, 837 days	12.5
TCGA-G3-A3CK-01A	0 years, male, asian, stage:Stage I, alive, 585 days	12.4
TCGA-DD-A4NF-01A	0 years, male, white, stage:Stage I, alive, 942 days	12.4
TCGA-KR-A7K7-01A	0 years, female, white, stage:Stage II, alive, 951 days	12.4
TCGA-NI-A8LF-01A	0 years, male, white, stage:Stage I, alive, 799 days	12.3
TCGA-DD-AACV-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	12.3
TCGA-DD-A73G-01A	0 years, female, white, stage:Stage I, alive, 3478 days	12.2
TCGA-DD-AADP-01A	0 years, male, asian, stage:Stage I, alive, 458 days	12.2
TCGA-DD-AADA-01A	0 years, female, asian, stage:Stage I, alive, 1233 days	12.2
TCGA-DD-AAW3-01A	0 years, male, asian, stage:Stage I, alive, 1633 days	12.2
TCGA-EP-A12J-01A	0 years, male, black or african american, stage:Stage I, alive, 570 days	12.2
TCGA-RC-A6M6-01A	0 years, male, white, stage:Stage II, alive, 9 days	12.0
TCGA-DD-A11C-01A	0 years, male, white, stage:Stage I, alive, 662 days	11.8
TCGA-2Y-A9GU-01A	0 years, female, white, stage:Stage I, alive, 1939 days	11.8
TCGA-EP-A3JL-01A	0 years, male, white, stage:Stage I, alive, 303 days	11.7
TCGA-MI-A75H-01A	0 years, male, white, stage:'--, alive, 747 days	11.7
TCGA-BC-A110-01A	0 years, female, black or african american, stage:'--, dead, 2116 days	11.6
TCGA-DD-A3A5-01A	0 years, female, white, stage:Stage III, dead, 3125 days	11.6
TCGA-EP-A2KB-01A	0 years, female, white, stage:Stage I, dead, 596 days	11.5
TCGA-DD-AADC-01A	0 years, male, asian, stage:Stage I, dead, 425 days	11.4
TCGA-DD-AACE-01A	0 years, male, asian, stage:Stage I, alive, 2184 days	11.3
TCGA-DD-A3A4-01A	0 years, male, white, stage:Stage IIIA, dead, 612 days	11.2
TCGA-CC-A7IE-01A	0 years, male, asian, stage:Stage IIIA, dead, 217 days	11.2
TCGA-DD-A39Z-01A	0 years, female, stage:Stage II, dead, 601 days	11.2
TCGA-RC-A7SK-01A	0 years, male, asian, stage:Stage I, alive, 472 days	11.0
TCGA-DD-A73B-01A	0 years, female, white, stage:Stage I, dead, 283 days	11.0
TCGA-DD-AAE1-01A	0 years, male, asian, stage:Stage I, alive, 552 days	10.9
TCGA-G3-AAV5-01A	0 years, male, white, stage:Stage II, alive, 354 days	10.9
TCGA-DD-AAEI-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	10.8
TCGA-DD-AAED-01A	0 years, male, asian, stage:Stage I, alive, 763 days	10.8
TCGA-K7-A5RF-01A	0 years, male, white, stage:Stage I, alive, 631 days	10.8
TCGA-DD-AACF-01A	0 years, male, asian, stage:Stage I, dead, 365 days	10.7
TCGA-ED-A459-01A	0 years, male, asian, stage:Stage II, alive, 910 days	10.7
TCGA-2Y-A9H4-01A	0 years, male, black or african american, stage:Stage I, alive, 1452 days	10.7
TCGA-G3-AAV3-01A	0 years, female, white, stage:Stage II, alive, 412 days	10.6
TCGA-DD-AACY-01A	0 years, male, asian, stage:Stage I, alive, 1450 days	10.6
TCGA-2Y-A9H9-01A	0 years, male, white, stage:Stage I, alive, 697 days	10.5
TCGA-ZP-A9D4-01A	0 years, female, white, stage:'--, alive, 395 days	10.5
TCGA-MR-A520-01A	0 years, male, white, stage:Stage I, alive, 229 days	10.5
TCGA-CC-A7IF-01A	0 years, male, asian, stage:Stage IIIA, dead, 649 days	10.4
TCGA-RG-A7D4-01A	0 years, male, black or african american, stage:Stage II, alive, 1098 days	10.3
TCGA-XR-A8TF-01A	0 years, male, white, stage:Stage I, dead, 693 days	10.3
TCGA-DD-A73C-01A	0 years, female, white, stage:Stage IIIA, alive, 701 days	10.3
TCGA-BC-A10U-01A	0 years, male, white, stage:'--, dead, 837 days	10.3
TCGA-DD-AACB-01A	0 years, female, asian, stage:Stage I, alive, 2324 days	10.2
TCGA-5R-AA1C-01A	0 years, male, white, stage:Stage II, alive, 520 days	10.2
TCGA-G3-AAV4-01A	0 years, female, white, stage:Stage I, dead, 27 days	10.2
TCGA-FV-A4ZQ-01A	0 years, male, white, stage:Stage I, alive, 12 days	10.2
TCGA-DD-A39X-01A	0 years, female, white, stage:Stage I, dead, 1694 days	10.1
TCGA-G3-A5SL-01A	0 years, male, white, stage:Stage II, alive, 621 days	10.1
TCGA-DD-A4NK-01A	0 years, female, white, stage:Stage IIIA, dead, 1210 days	10.0
TCGA-DD-AAVY-01A	0 years, male, asian, stage:Stage IIIA, alive, 1970 days	10.0
TCGA-BC-A69I-01A	0 years, male, white, stage:Stage I, alive, 387 days	10.0
TCGA-DD-A1ED-01A	0 years, male, white, stage:Stage I, alive, 2301 days	10.0
TCGA-ZS-A9CG-01A	0 years, male, white, stage:Stage II, alive, 341 days	10.0
TCGA-DD-AAC9-01A	0 years, male, asian, stage:Stage I, alive, 347 days	9.9
TCGA-DD-AAW2-01A	0 years, male, asian, stage:Stage I, alive, 1855 days	9.9
TCGA-DD-AADG-01A	0 years, male, asian, stage:Stage IIIA, alive, 1145 days	9.8
TCGA-G3-A7M7-01A	0 years, male, white, stage:Stage I, alive, 361 days	9.8
TCGA-G3-A25Z-01A	0 years, male, asian, stage:Stage I, alive, 655 days	9.8
TCGA-CC-A9FW-01A	0 years, male, asian, stage:Stage IIIA, alive, 248 days	9.7
TCGA-2Y-A9H7-01A	0 years, female, white, stage:Stage I, alive, 1168 days	9.6
TCGA-DD-A4NI-01A	0 years, male, white, stage:Stage II, alive, 816 days	9.6
TCGA-DD-AAVX-01A	0 years, male, asian, stage:Stage II, alive, 1718 days	9.6
TCGA-G3-A25U-01A	0 years, female, asian, stage:Stage I, alive, 1636 days	9.5
TCGA-DD-A4NL-01A	0 years, male, white, stage:Stage I, alive, 1711 days	9.3
TCGA-DD-AADK-01A	0 years, female, asian, stage:Stage II, alive, 1049 days	9.3
TCGA-WQ-AB4B-01A	0 years, male, white, stage:Stage II, alive, 395 days	9.2
TCGA-ES-A2HT-01A	0 years, male, black or african american, stage:Stage I, dead, 438 days	9.0
TCGA-WX-AA46-01A	0 years, male, white, stage:Stage II, alive, 756 days	8.9
TCGA-DD-AACC-01A	0 years, male, asian, stage:Stage I, dead, 1685 days	8.9
TCGA-MI-A75G-01A	0 years, male, white, stage:Stage II, alive, 698 days	8.8
TCGA-DD-AAE7-01A	0 years, male, asian, stage:Stage I, alive, 644 days	8.8
TCGA-RC-A6M4-01A	0 years, female, white, stage:Stage IIIA, alive, 22 days	8.6
TCGA-FV-A496-01A	0 years, female, white, stage:Stage I, alive, 10 days	8.5
TCGA-DD-AAW1-01A	0 years, male, asian, stage:Stage IIIA, alive, 1989 days	8.5
TCGA-RC-A7SB-01A	0 years, male, asian, stage:Stage II, alive, 588 days	8.4
TCGA-G3-A25S-01A	0 years, male, white, stage:Stage I, dead, 416 days	8.3
TCGA-BC-A69H-01A	0 years, male, white, stage:Stage II, alive, 444 days	8.3
TCGA-G3-AAV1-01A	0 years, male, asian, stage:Stage IIIC, dead, 359 days	8.2
TCGA-DD-AACI-01A	0 years, male, asian, stage:Stage II, alive, 1618 days	8.2
TCGA-DD-AADM-01A	0 years, male, asian, stage:Stage II, dead, 12 days	8.1
TCGA-DD-AAE4-01A	0 years, female, asian, stage:Stage I, alive, 608 days	8.1
TCGA-ZS-A9CE-01A	0 years, female, white, stage:Stage II, alive, 1241 days	8.0
TCGA-2Y-A9H3-01A	0 years, male, white, stage:Stage II, alive, 1516 days	7.8
TCGA-DD-AACO-01A	0 years, male, asian, stage:Stage I, alive, 1876 days	7.8
TCGA-DD-A4NP-01A	0 years, male, white, stage:Stage I, alive, 3308 days	7.8
TCGA-FV-A4ZP-01A	0 years, male, white, stage:Stage IIIA, dead, 2486 days	7.7
TCGA-G3-AAV0-01A	0 years, male, asian, stage:Stage I, alive, 476 days	7.6
TCGA-DD-A4NG-01A	0 years, male, white, stage:Stage IIIA, dead, 802 days	7.5
TCGA-EP-A26S-01A	0 years, male, white, stage:Stage I, alive, 608 days	7.5
TCGA-RC-A7SF-01A	0 years, male, asian, stage:Stage I, alive, 579 days	7.5
TCGA-DD-A1EB-01A	0 years, female, stage:Stage I, alive, 2017 days	7.5
TCGA-G3-AAUZ-01A	0 years, male, stage:Stage I, alive, 480 days	7.2
TCGA-G3-A5SI-01A	0 years, male, asian, stage:Stage II, dead, 768 days	7.2
TCGA-LG-A9QD-01A	0 years, male, white, stage:Stage IIIA, alive, 366 days	7.1
TCGA-LG-A9QC-01A	0 years, male, white, stage:Stage I, alive, 425 days	7.0
TCGA-DD-A73D-01A	0 years, female, white, stage:Stage II, alive, 693 days	7.0
TCGA-DD-AACD-01A	0 years, male, asian, stage:Stage I, dead, 381 days	6.9
TCGA-DD-AACG-01A	0 years, male, asian, stage:Stage II, dead, 469 days	6.8
TCGA-CC-5259-01A	0 years, female, asian, stage:Stage IIIC, alive, 250 days	6.8
TCGA-CC-A9FS-01A	0 years, male, asian, stage:Stage II, alive, 211 days	6.7
TCGA-ES-A2HS-01A	0 years, male, white, stage:Stage I, dead, 688 days	6.5
TCGA-CC-A123-01A	0 years, female, asian, stage:Stage IIIA, alive, 219 days	6.4
TCGA-DD-AAD6-01A	0 years, male, asian, stage:Stage IIIA, alive, 672 days	6.2
TCGA-ED-A7PZ-01A	0 years, male, asian, stage:Stage II, alive, 6 days	6.1
TCGA-DD-AAD0-01A	0 years, female, asian, stage:Stage I, alive, 137 days	6.1
TCGA-DD-A119-01A	0 years, male, asian, stage:Stage IV, dead, 223 days	6.0
TCGA-DD-AAVU-01A	0 years, male, asian, stage:Stage II, alive, 2202 days	6.0
TCGA-DD-A116-01A	0 years, male, asian, stage:Stage IIIA, dead, 1622 days	6.0
TCGA-DD-AAEB-01A	0 years, male, asian, stage:Stage I, alive, 478 days	5.9
TCGA-DD-AADQ-01A	0 years, male, asian, stage:Stage II, alive, 436 days	5.9
TCGA-G3-A3CJ-01A	0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	5.7
TCGA-DD-AAE3-01A	0 years, male, asian, stage:Stage I, alive, 566 days	5.6
TCGA-2Y-A9H1-01A	0 years, male, white, stage:Stage I, dead, 1229 days	5.5
TCGA-G3-A5SK-01A	0 years, male, white, stage:Stage I, alive, 744 days	5.5
TCGA-DD-AADF-01A	0 years, female, asian, stage:Stage I, dead, 115 days	5.4
TCGA-DD-AADR-01A	0 years, male, asian, stage:Stage I, alive, 2028 days	5.4
TCGA-NI-A4U2-01A	0 years, male, white, stage:Stage IIIA, dead, 1791 days	5.3
TCGA-DD-AADO-01A	0 years, male, asian, stage:Stage I, alive, 453 days	5.2
TCGA-DD-A3A7-01A	0 years, male, stage:Stage IIIB, dead, 419 days	5.0
TCGA-DD-A39V-01A	0 years, male, white, stage:Stage II, dead, 643 days	4.7
TCGA-DD-AACJ-01A	0 years, male, asian, stage:Stage II, alive, 2102 days	4.4
TCGA-WX-AA47-01A	0 years, female, white, stage:Stage IIIA, dead, 556 days	4.3
TCGA-DD-A3A1-01A	0 years, male, stage:Stage IIIA, dead, 233 days	4.2
TCGA-DD-AADS-01A	0 years, male, asian, stage:Stage I, alive, 474 days	4.0
TCGA-DD-A3A3-01A	0 years, male, asian, stage:Stage I, dead, 535 days	4.0
TCGA-DD-AADU-01A	0 years, male, asian, stage:Stage II, alive, 554 days	3.9
TCGA-CC-A7IL-01A	0 years, male, asian, stage:Stage IIIA, dead, 278 days	3.8
TCGA-DD-AADN-01A	0 years, male, asian, stage:Stage I, alive, 898 days	3.7
TCGA-G3-A7M5-01A	0 years, male, asian, stage:Stage I, alive, 447 days	3.7
TCGA-DD-A3A2-01A	0 years, female, white, stage:Stage I, dead, 2131 days	3.2
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off". Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation. Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient. & Survival analysisⁱ Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
383	Tumor	1.6
311	Tumor	1.3
283	Tumor	1.2
277	Tumor	1.1
125	Tumor	1.1
384	Normal	1.1
483	Tumor	0.9
192	Normal	0.8
917	Tumor	0.8
195	Tumor	0.7
727	Tumor	0.7
217	Tumor	0.7
881	Tumor	0.7
213	Tumor	0.7
536	Normal	0.7
268	Normal	0.6
557	Tumor	0.6
525	Tumor	0.6
814	Normal	0.6
492	Normal	0.5
447	Tumor	0.5
444	Normal	0.5
478	Normal	0.5
661	Tumor	0.5
813	Tumor	0.5
743	Tumor	0.5
497	Tumor	0.5
671	Tumor	0.5
191	Tumor	0.4
721	Tumor	0.4
491	Tumor	0.4
573	Tumor	0.4
916	Normal	0.4
271	Tumor	0.4
493	Tumor	0.4
185	Tumor	0.4
524	Normal	0.4
943	Tumor	0.4
395	Tumor	0.4
434	Normal	0.4
567	Tumor	0.4
218	Normal	0.4
697	Tumor	0.4
262	Normal	0.3
538	Normal	0.3
427	Tumor	0.3
365	Tumor	0.3
297	Tumor	0.3
785	Tumor	0.3
131	Tumor	0.3
563	Tumor	0.3
963	Tumor	0.3
755	Tumor	0.3
286	Normal	0.3
641	Tumor	0.3
331	Tumor	0.3
221	Tumor	0.3
686	Normal	0.3
617	Tumor	0.3
145	Tumor	0.3
913	Tumor	0.3
1015	Tumor	0.3
857	Tumor	0.2
921	Tumor	0.2
473	Tumor	0.2
817	Tumor	0.2
571	Tumor	0.2
433	Tumor	0.2
865	Tumor	0.2
883	Tumor	0.2
474	Normal	0.2
533	Tumor	0.2
141	Tumor	0.2
944	Normal	0.2
461	Tumor	0.2
212	Normal	0.2
713	Tumor	0.2
716	Normal	0.2
498	Normal	0.2
528	Normal	0.2
222	Normal	0.2
918	Normal	0.2
313	Tumor	0.2
162	Normal	0.2
424	Normal	0.2
534	Normal	0.2
954	Normal	0.2
312	Normal	0.2
696	Normal	0.2
188	Normal	0.2
228	Normal	0.2
471	Tumor	0.2
267	Tumor	0.2
982	Normal	0.2
852	Normal	0.2
223	Tumor	0.2
818	Normal	0.2
367	Tumor	0.1
636	Normal	0.1
923	Tumor	0.1
858	Normal	0.1
284	Normal	0.1
572	Normal	0.1
958	Normal	0.1
343	Tumor	0.1
956	Normal	0.1
186	Normal	0.1
722	Normal	0.1
975	Tumor	0.1
1044	Normal	0.1
1045	Tumor	0.1
647	Tumor	0.1
161	Tumor	0.1
786	Normal	0.1
148	Normal	0.1
514	Normal	0.1
172	Normal	0.1
926	Normal	0.1
863	Tumor	0.1
211	Tumor	0.1
472	Normal	0.1
698	Normal	0.1
224	Normal	0.1
866	Normal	0.1
341	Tumor	0.1
546	Normal	0.1
535	Tumor	0.1
1016	Normal	0.1
756	Normal	0.1
232	Normal	0.1
258	Normal	0.1
554	Normal	0.1
824	Normal	0.1
568	Normal	0.1
955	Tumor	0.1
714	Normal	0.1
868	Normal	0.1
481	Tumor	0.1
423	Tumor	0.1
257	Tumor	0.0
728	Normal	0.0
574	Normal	0.0
142	Normal	0.0
662	Normal	0.0
953	Tumor	0.0
426	Normal	0.0
448	Normal	0.0
477	Tumor	0.0
171	Tumor	0.0
724	Normal	0.0
874	Normal	0.0
925	Tumor	0.0
976	Normal	0.0
278	Normal	0.0
964	Normal	0.0
545	Tumor	0.0
922	Normal	0.0
227	Tumor	0.0
685	Tumor	0.0
436	Normal	0.0
816	Normal	0.0
666	Normal	0.0
952	Normal	0.0
494	Normal	0.0
746	Normal	0.0
873	Tumor	0.0
422	Normal	0.0
285	Tumor	0.0
462	Normal	0.0
558	Normal	0.0
147	Tumor	-0.1
862	Normal	-0.1
342	Normal	-0.1
261	Tumor	-0.1
745	Tumor	-0.1
113	Tumor	-0.1
564	Normal	-0.1
642	Normal	-0.1
663	Tumor	-0.1
884	Normal	-0.1
1046	Normal	-0.1
482	Normal	-0.1
428	Normal	-0.1
937	Tumor	-0.1
187	Tumor	-0.1
135	Tumor	-0.1
867	Tumor	-0.1
737	Tumor	-0.1
272	Normal	-0.1
1043	Tumor	-0.1
361	Tumor	-0.1
515	Tumor	-0.1
516	Normal	-0.1
526	Normal	-0.1
778	Normal	-0.1
231	Tumor	-0.1
968	Normal	-0.1
414	Normal	-0.1
744	Normal	-0.1
527	Tumor	-0.1
665	Tumor	-0.1
616	Normal	-0.1
354	Normal	-0.1
914	Normal	-0.1
938	Normal	-0.1
421	Tumor	-0.1
385	Tumor	-0.1
965	Tumor	-0.1
446	Normal	-0.2
443	Tumor	-0.2
882	Normal	-0.2
425	Tumor	-0.2
445	Tumor	-0.2
864	Normal	-0.2
966	Normal	-0.2
648	Normal	-0.2
924	Normal	-0.2
362	Normal	-0.2
627	Tumor	-0.2
628	Normal	-0.2
358	Normal	-0.2
978	Normal	-0.2
146	Normal	-0.2
435	Tumor	-0.2
138	Normal	-0.2
861	Tumor	-0.2
126	Normal	-0.2
912	Normal	-0.2
738	Normal	-0.2
314	Normal	-0.2
214	Normal	-0.2
664	Normal	-0.2
715	Tumor	-0.2
332	Normal	-0.2
136	Normal	-0.2
368	Normal	-0.2
672	Normal	-0.2
877	Tumor	-0.2
123	Tumor	-0.3
983	Tumor	-0.3
487	Tumor	-0.3
132	Normal	-0.3
915	Tumor	-0.3
518	Normal	-0.3
618	Normal	-0.3
366	Normal	-0.3
878	Normal	-0.3
376	Normal	-0.3
984	Normal	-0.3
432	Normal	-0.3
484	Normal	-0.3
553	Tumor	-0.3
957	Tumor	-0.3
124	Normal	-0.3
431	Tumor	-0.3
413	Tumor	-0.4
128	Normal	-0.4
396	Normal	-0.4
695	Tumor	-0.4
351	Tumor	-0.4
517	Tumor	-0.4
352	Normal	-0.4
723	Tumor	-0.4
911	Tumor	-0.4
391	Tumor	-0.4
742	Normal	-0.4
488	Normal	-0.4
196	Normal	-0.4
344	Normal	-0.4
777	Tumor	-0.4
823	Tumor	-0.4
615	Tumor	-0.4
967	Tumor	-0.4
386	Normal	-0.4
375	Tumor	-0.4
951	Tumor	-0.5
353	Tumor	-0.5
387	Tumor	-0.5
513	Tumor	-0.5
137	Tumor	-0.5
537	Tumor	-0.5
1014	Normal	-0.5
394	Normal	-0.5
111	Normal	-0.5
127	Tumor	-0.5
815	Tumor	-0.6
392	Normal	-0.6
981	Tumor	-0.6
523	Tumor	-0.6
635	Tumor	-0.6
977	Tumor	-0.6
114	Normal	-0.7
851	Tumor	-0.7
388	Normal	-0.7
298	Normal	-0.7
741	Tumor	-0.8
1013	Tumor	-0.9
393	Tumor	-0.9
357	Tumor	-0.9
112	Tumor	-1.1
355	Tumor	N/A
356	Normal	N/A
363	Tumor	N/A
364	Normal	N/A
1022	Normal	N/A
1021	Tumor	N/A
1032	Normal	N/A
1031	Tumor	N/A
1028	Normal	N/A
1027	Tumor	N/A
1026	Normal	N/A
1025	Tumor	N/A
1042	Normal	N/A
1041	Tumor	N/A
411	Tumor	N/A
412	Normal	N/A
415	Tumor	N/A
416	Normal	N/A
327	Tumor	N/A
328	Normal	N/A
451	Tumor	N/A
452	Normal	N/A
455	Tumor	N/A
456	Normal	N/A
463	Tumor	N/A
464	Normal	N/A
465	Tumor	N/A
466	Normal	N/A
467	Tumor	N/A
468	Normal	N/A
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA058076
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Carcinoma, Hepatocellular, NOS
Cholangiocarcinoma