We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LRP5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
60.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
55.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
48.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
41.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
40.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
39.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
38.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
38.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
37.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
35.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
34.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
31.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
31.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
29.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
28.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
27.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
27.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
25.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
25.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
25.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
24.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
23.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
22.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
22.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
21.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
21.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
21.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
21.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
20.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
18.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
17.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
17.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
17.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
17.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
16.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
16.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
16.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
15.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
15.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
15.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
15.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
13.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
12.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
12.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
11.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
10.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
9.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
8.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
7.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
7.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
6.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
5.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
3.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
2.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
2.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LRP5 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
233.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
87.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
78.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
71.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
69.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
68.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
67.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
67.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
65.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
61.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
61.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
60.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
60.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
59.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
58.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
58.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
57.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
57.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
57.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
57.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
56.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
56.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
54.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
54.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
54.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
53.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
52.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
52.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
52.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
52.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
52.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
51.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
51.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
51.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
51.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
51.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
50.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
49.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
49.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
49.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
48.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
47.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
47.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
47.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
47.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
47.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
47.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
47.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
46.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
46.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
46.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
46.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
45.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
45.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
45.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
44.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
44.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
44.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
44.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
43.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
42.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
42.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
42.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
42.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
42.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
42.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
42.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
42.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
42.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
41.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
41.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
41.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
41.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
41.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
41.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
41.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
41.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
41.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
40.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
40.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
40.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
40.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
40.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
40.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
39.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
39.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
39.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
39.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
39.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
39.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
39.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
39.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
39.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
39.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
39.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
39.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
39.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
38.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
38.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
38.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
38.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
38.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
38.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
38.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
38.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
38.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
38.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
38.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
38.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
37.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
37.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
37.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
37.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
37.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
37.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
37.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
37.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
37.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
36.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
36.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
36.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
36.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
36.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
36.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
36.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
36.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
36.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
36.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
35.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
35.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
35.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
35.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
35.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
35.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
35.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
35.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
35.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
34.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
34.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
34.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
34.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
34.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
34.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
34.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
34.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
34.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
34.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
34.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
34.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
34.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
33.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
33.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
33.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
33.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
33.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
33.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
33.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
33.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
33.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
33.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
33.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
33.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
33.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
33.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
33.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
33.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
33.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
33.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
32.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
32.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
32.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
32.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
32.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
32.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
32.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
32.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
32.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
32.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
32.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
32.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
32.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
32.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
32.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
32.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
32.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
31.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
31.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
31.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
31.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
31.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
31.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
31.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
31.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
31.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
31.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
31.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
31.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
31.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
31.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
31.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
30.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
30.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
30.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
30.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
30.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
30.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
30.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
30.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
30.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
30.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
30.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
30.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
30.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
30.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
29.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
29.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
29.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
29.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
29.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
29.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
29.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
29.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
29.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
29.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
28.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
28.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
28.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
28.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
28.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
28.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
28.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
28.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
28.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
28.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
28.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
27.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
27.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
27.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
27.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
27.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
27.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
27.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
27.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
27.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
27.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
27.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
27.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
27.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
27.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
26.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
26.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
26.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
26.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
26.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
26.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
26.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
26.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
26.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
26.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
26.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
26.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
26.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
25.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
25.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
25.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
25.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
25.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
25.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
25.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
25.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
25.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
25.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
25.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
25.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
25.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
24.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
24.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
24.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
24.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
24.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
24.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
24.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
24.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
24.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
24.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
24.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
24.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
24.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
24.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
23.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
23.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
23.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
23.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
23.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
23.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
23.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
23.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
23.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
23.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
23.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
23.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
23.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
23.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
23.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
23.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
23.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
23.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
23.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
23.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
22.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
22.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
22.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
22.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
22.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
22.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
22.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
22.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
22.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
22.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
22.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
21.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
21.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
21.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
21.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
21.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
21.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
21.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
21.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
21.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
21.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
21.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
21.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
21.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
21.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
20.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
20.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
20.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
20.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
20.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
20.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
20.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
20.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
20.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
20.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
20.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
20.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
20.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
20.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
19.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
19.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
19.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
19.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
19.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
19.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
19.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
19.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
19.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
19.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
19.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
19.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
19.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
19.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
19.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
19.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
18.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
18.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
18.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
18.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
18.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
18.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
18.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
18.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
18.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
18.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
18.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
18.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
18.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
18.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
18.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
18.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
18.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
18.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
17.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
17.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
17.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
17.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
17.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
17.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
17.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
17.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
17.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
17.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
17.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
17.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
17.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
17.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
17.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
17.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
16.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
16.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
16.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
16.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
16.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
16.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
15.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
15.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
15.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
15.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
15.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
15.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
15.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
14.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
14.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
14.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
14.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
14.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
14.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
14.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
14.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
14.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
14.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
14.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
14.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
14.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
14.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
14.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
13.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
13.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
13.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
13.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
13.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
13.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
13.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
13.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
12.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
12.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
12.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
12.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
12.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
12.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
12.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
11.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
11.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
11.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
10.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
10.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
10.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
9.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
9.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
9.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
9.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
9.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
8.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
8.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
8.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
8.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
8.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
7.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
7.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
7.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
6.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
6.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
6.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
5.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
5.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
5.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
4.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
3.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
2.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LRP5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
80.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
63.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
59.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
59.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
58.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
57.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
55.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
54.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
53.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
52.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
52.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
50.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
50.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
49.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
47.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
47.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
46.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
46.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
43.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
42.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
42.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
42.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
41.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
40.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
40.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
40.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
40.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
39.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
38.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
38.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
38.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
37.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
36.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
36.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
36.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
36.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
36.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
35.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
35.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
34.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
34.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
34.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
33.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
33.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
32.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
32.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
31.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
31.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
30.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
30.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
30.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
29.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
29.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
28.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
27.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
27.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
26.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
26.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
25.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
25.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
24.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
24.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
24.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
23.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
23.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
22.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
22.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
21.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
21.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
20.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
20.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
18.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
18.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
18.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
18.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
17.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
17.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
17.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
16.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
16.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
15.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
15.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
15.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
15.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
14.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
14.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
14.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
11.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
7.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
4.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LRP5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
270.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
185.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
145.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
135.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
132.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
129.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
125.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
103.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
102.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
101.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
92.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
92.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
92.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
91.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
90.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
81.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
80.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
78.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
78.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
77.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
71.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
70.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
69.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
66.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
65.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
65.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
65.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
64.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
64.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
62.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
62.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
61.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
59.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
59.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
58.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
58.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
58.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
58.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
57.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
56.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
56.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
54.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
54.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
54.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
53.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
53.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
53.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
52.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
52.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
52.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
51.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
51.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
51.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
51.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
50.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
50.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
50.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
50.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
49.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
49.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
49.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
49.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
48.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
48.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
48.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
48.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
48.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
47.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
47.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
47.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
47.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
46.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
46.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
46.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
46.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
46.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
45.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
45.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
45.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
45.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
45.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
44.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
44.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
44.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
44.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
43.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
43.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
43.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
43.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
42.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
42.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
42.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
42.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
42.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
41.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
41.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
41.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
40.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
40.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
40.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
40.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
40.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
39.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
39.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
39.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
39.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
39.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
39.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
39.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
38.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
38.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
38.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
38.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
38.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
37.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
37.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
37.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
37.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
37.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
37.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
37.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
37.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
36.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
36.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
36.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
36.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
36.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
36.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
36.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
36.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
36.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
35.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
35.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
35.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
35.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
35.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
35.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
35.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
35.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
34.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
34.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
34.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
33.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
33.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
33.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
33.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
33.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
33.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
33.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
32.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
32.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
32.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
32.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
32.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
32.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
32.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
32.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
32.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
32.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
32.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
31.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
31.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
31.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
31.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
31.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
31.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
30.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
30.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
30.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
30.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
30.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
30.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
30.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
30.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
29.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
29.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
29.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
29.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
29.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
28.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
28.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
28.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
28.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
28.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
28.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
28.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
28.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
28.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
28.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
28.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
28.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
28.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
28.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
26.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
26.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
26.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
26.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
26.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
26.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
26.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
25.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
25.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
25.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
24.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
24.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
24.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
24.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
24.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
23.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
23.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
22.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
22.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
22.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
22.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
22.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
22.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
22.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
21.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
21.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
21.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
21.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
21.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
20.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
20.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
20.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
20.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
20.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
20.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
20.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
19.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
19.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
19.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
19.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
19.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
18.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
18.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
18.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
18.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
17.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
17.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
17.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
17.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
17.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
16.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
16.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
16.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
15.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
15.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
15.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
15.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
13.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
13.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
13.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
12.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
12.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
12.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
12.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
11.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
11.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
11.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
10.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
10.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
10.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
10.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
9.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
9.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
7.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
7.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
2.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
