HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:284.7 nTPM
HPA Brain:305.5 nTPM
GTEx:284.7 nTPM
FANTOM5:475.8 Scaled Tags Per Million
Pig:202.5 nTPM
Mouse:187.3 nTPM
Allen mouse:6.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 305.5
Sample id Sample description nTPM
Hippocampus
nTPM: 176.8
1898 Male, age 80, left hemisphere 255.0
2621 Female, age 67, right hemisphere 231.6
1855 Male, age 76, left hemisphere 194.6
2148 Female, age 91, left hemisphere 145.3
1911 Female, age 85, right hemisphere 118.9
2529 Female, age 94, left hemisphere 115.4
Dentate gyrus
nTPM: 176.8
2530 Female, age 94, left hemisphere 229.5
1927 Female, age 91, both hemispheres 219.8
2010 Male, age 76, both hemispheres 177.0
2246 Female, age 85, both hemispheres 177.0
2528 Male, age 74, both hemispheres 134.5
2531 Female, age 67, both hemispheres 123.1
Entorhinal gyrus
nTPM: 209.6
2613 Female, age 94, left hemisphere 327.1
2764 Male, age 80, right hemisphere 230.7
1938 Female, age 85, left hemisphere 215.3
1787 Male, age 76, left hemisphere 204.1
2686 Male, age 75, right hemisphere 173.4
2117 Female, age 91, right hemisphere 106.9
Hippocampus, CA1
nTPM: 215.5
2749 Male, age 80, left hemisphere 413.1
2527 Male, age 74, both hemispheres 207.2
1873 Female, age 85, both hemispheres 182.3
2082 Female, age 91, right hemisphere 155.3
2045 Male, age 76, both hemispheres 119.8
Hippocampus, CA2
nTPM: 201.3
1892 Male, age 76, both hemispheres 276.0
1963 Male, age 80, left hemisphere 244.5
2437 Female, age 94, left hemisphere 225.3
2249 Male, age 74, both hemispheres 175.8
2113 Female, age 91, right hemisphere 155.0
1940 Female, age 85, left hemisphere 131.2
Hippocampus, CA3
nTPM: 183.6
2137 Male, age 80, left hemisphere 310.6
1867 Male, age 76, both hemispheres 201.5
2436 Male, age 74, both hemispheres 175.7
2861 Female, age 67, both hemispheres 144.7
2620 Female, age 94, left hemisphere 139.1
1891 Female, age 85, both hemispheres 130.2
Parahippocampal cortex
nTPM: 231.4
2245 Female, age 91, both hemispheres 330.3
1990 Female, age 91, right hemisphere 267.0
1850 Male, age 80, both hemispheres 258.7
2250 Female, age 67, right hemisphere 255.2
2693 Female, age 94, both hemispheres 232.6
2532 Female, age 72, left hemisphere 213.8
2622 Female, age 67, right hemisphere 210.0
1933 Female, age 85, both hemispheres 207.4
2692 Male, age 74, both hemispheres 174.9
2018 Male, age 76, both hemispheres 163.7
Perirhinal gyrus
nTPM: 305.5
1847 Female, age 91, left hemisphere 436.0
2521 Female, age 94, right hemisphere 349.7
1794 Male, age 80, right hemisphere 282.0
1841 Female, age 85, right hemisphere 258.5
2848 Male, age 76, right hemisphere 201.5
Subiculum
nTPM: 170.9
1901 Male, age 80, both hemispheres 220.1
2438 Female, age 94, left hemisphere 202.8
2619 Male, age 74, both hemispheres 192.9
1977 Female, age 85, both hemispheres 185.5
2042 Male, age 76, both hemispheres 132.9
2729 Female, age 91, right hemisphere 91.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 284.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 284.7
Samples: 197

Max nTPM: 930.1
Min nTPM: 26.1
Std nTPM: 190.9
Median nTPM: 229.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 930.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 918.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 785.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 762.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 751.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 707.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 681.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 680.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 668.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 649.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 643.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 475.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 475.8
FF:10169-103B7 60 years, female 765.4
FF:10153-102I9 76 years, female 186.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 202.5
Pig sample Sample description nTPM
Subiculum
nTPM: 202.6
Samples: 4

Max nTPM: 276.2
Min nTPM: 169.3
Sample A Female 276.2
Sample B Female 177.8
Sample C Male 186.9
Sample D Male 169.3
Dorsal hippocampus
nTPM: 155.2
Samples: 4

Max nTPM: 238.7
Min nTPM: 85.9
Sample A Female 238.7
Sample B Female 156.8
Sample C Male 139.4
Sample D Male 85.9
Entorhinal cortex
nTPM: 193.8
Samples: 4

Max nTPM: 245.9
Min nTPM: 163.2
Sample A Female 245.9
Sample B Female 163.2
Sample C Male 187.9
Sample D Male 178.3
Ventral hippocampus
nTPM: 174.9
Samples: 4

Max nTPM: 224.9
Min nTPM: 102.8
Sample A Female 192.5
Sample B Female 102.8
Sample C Male 224.9
Sample D Male 179.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 187.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 187.3
Samples: 4

Max nTPM: 204.6
Min nTPM: 174.8
Sample A Male 174.8
Sample B Male 183.0
Sample C Female 186.8
Sample D Female 204.6
Hippocampal formation
nTPM: 164.7
Samples: 4

Max nTPM: 189.4
Min nTPM: 149.3
Sample A Male 189.4
Sample B Male 149.3
Sample C Female 157.1
Sample D Female 162.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.5
1210 Antisense, RP_040324_01_E03, Mouse strain C57BL/6J (56 days, male) 6.5
1209 Antisense, RP_040324_01_E03, Mouse strain C57BL/6J (56 days, male) 5.9

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