HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:46.8 nTPM
HPA Brain:61.0 nTPM
GTEx:46.8 nTPM
FANTOM5:69.9 Scaled Tags Per Million
Pig:82.0 nTPM
Mouse:151.3 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053905Antibody HPA062723
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 61.0
Sample id Sample description nTPM
Hippocampus
nTPM: 61.0
1855 Male, age 76, left hemisphere 74.5
1898 Male, age 80, left hemisphere 72.5
1911 Female, age 85, right hemisphere 56.9
2148 Female, age 91, left hemisphere 56.3
2529 Female, age 94, left hemisphere 54.1
2621 Female, age 67, right hemisphere 51.5
Dentate gyrus
nTPM: 57.2
2530 Female, age 94, left hemisphere 81.4
2010 Male, age 76, both hemispheres 66.9
2528 Male, age 74, both hemispheres 55.0
2246 Female, age 85, both hemispheres 51.5
1927 Female, age 91, both hemispheres 45.8
2531 Female, age 67, both hemispheres 42.8
Entorhinal gyrus
nTPM: 60.3
2117 Female, age 91, right hemisphere 89.0
1938 Female, age 85, left hemisphere 63.2
2764 Male, age 80, right hemisphere 58.7
2686 Male, age 75, right hemisphere 54.6
1787 Male, age 76, left hemisphere 50.6
2613 Female, age 94, left hemisphere 45.7
Hippocampus, CA1
nTPM: 55.3
2749 Male, age 80, left hemisphere 63.1
1873 Female, age 85, both hemispheres 55.4
2527 Male, age 74, both hemispheres 54.4
2045 Male, age 76, both hemispheres 51.9
2082 Female, age 91, right hemisphere 51.7
Hippocampus, CA2
nTPM: 56.8
1892 Male, age 76, both hemispheres 63.7
1963 Male, age 80, left hemisphere 62.1
2249 Male, age 74, both hemispheres 58.6
2113 Female, age 91, right hemisphere 54.7
2437 Female, age 94, left hemisphere 51.2
1940 Female, age 85, left hemisphere 50.4
Hippocampus, CA3
nTPM: 54.8
1867 Male, age 76, both hemispheres 66.4
2436 Male, age 74, both hemispheres 62.6
1891 Female, age 85, both hemispheres 57.0
2861 Female, age 67, both hemispheres 54.6
2137 Male, age 80, left hemisphere 45.3
2620 Female, age 94, left hemisphere 42.7
Parahippocampal cortex
nTPM: 52.4
2692 Male, age 74, both hemispheres 64.1
1933 Female, age 85, both hemispheres 64.0
1850 Male, age 80, both hemispheres 56.1
1990 Female, age 91, right hemisphere 51.2
2018 Male, age 76, both hemispheres 50.8
2622 Female, age 67, right hemisphere 49.3
2532 Female, age 72, left hemisphere 49.1
2245 Female, age 91, both hemispheres 47.4
2250 Female, age 67, right hemisphere 46.1
2693 Female, age 94, both hemispheres 45.5
Perirhinal gyrus
nTPM: 48.8
1794 Male, age 80, right hemisphere 54.2
2848 Male, age 76, right hemisphere 50.8
1847 Female, age 91, left hemisphere 50.7
1841 Female, age 85, right hemisphere 45.0
2521 Female, age 94, right hemisphere 43.2
Subiculum
nTPM: 56.7
2042 Male, age 76, both hemispheres 66.4
1901 Male, age 80, both hemispheres 63.7
1977 Female, age 85, both hemispheres 60.4
2729 Female, age 91, right hemisphere 58.3
2619 Male, age 74, both hemispheres 54.6
2438 Female, age 94, left hemisphere 36.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 46.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.8
Samples: 197

Max nTPM: 78.0
Min nTPM: 17.6
Std nTPM: 10.4
Median nTPM: 47.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 78.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 77.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 75.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 73.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 70.9
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 70.4
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 67.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 66.9
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 64.6
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 64.0
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 64.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 69.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.9
FF:10153-102I9 76 years, female 83.8
FF:10169-103B7 60 years, female 56.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 82.0
Pig sample Sample description nTPM
Subiculum
nTPM: 71.4
Samples: 4

Max nTPM: 86.9
Min nTPM: 62.6
Sample A Female 86.9
Sample B Female 68.4
Sample C Male 62.6
Sample D Male 67.7
Dorsal hippocampus
nTPM: 82.0
Samples: 4

Max nTPM: 106.9
Min nTPM: 59.1
Sample A Female 106.9
Sample B Female 80.7
Sample C Male 81.2
Sample D Male 59.1
Entorhinal cortex
nTPM: 71.1
Samples: 4

Max nTPM: 77.3
Min nTPM: 61.4
Sample A Female 68.3
Sample B Female 77.3
Sample C Male 77.3
Sample D Male 61.4
Ventral hippocampus
nTPM: 79.0
Samples: 4

Max nTPM: 97.5
Min nTPM: 57.1
Sample A Female 81.1
Sample B Female 57.1
Sample C Male 97.5
Sample D Male 80.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 151.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 133.3
Samples: 4

Max nTPM: 139.7
Min nTPM: 126.6
Sample A Male 134.0
Sample B Male 126.6
Sample C Female 132.8
Sample D Female 139.7
Hippocampal formation
nTPM: 151.3
Samples: 4

Max nTPM: 164.4
Min nTPM: 136.1
Sample A Male 136.1
Sample B Male 140.8
Sample C Female 163.7
Sample D Female 164.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
71486931 Antisense, RP_050913_01_A02, Mouse strain C57BL/6J (56 days, male) 0.4

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