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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITGA5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
304.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
118.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
62.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
52.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
34.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
32.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
26.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
25.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
25.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
25.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
22.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
22.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
22.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
21.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
20.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
20.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
18.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
18.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
17.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
16.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
14.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
14.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
14.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
13.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
13.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
13.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
12.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
12.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
12.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
12.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
12.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
12.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
11.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
11.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
11.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
11.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
10.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
10.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
10.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
9.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
9.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
8.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
8.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
7.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
7.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
7.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
7.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
6.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
6.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
6.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
6.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
6.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
5.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
4.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITGA5 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
76.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
341.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
316.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
275.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
269.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
263.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
258.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
257.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
247.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
239.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
231.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
221.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
218.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
215.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
210.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
209.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
208.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
208.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
204.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
202.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
202.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
200.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
196.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
187.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
184.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
183.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
176.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
176.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
173.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
172.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
169.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
169.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
169.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
165.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
163.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
162.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
160.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
158.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
157.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
156.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
155.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
153.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
150.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
149.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
148.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
145.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
144.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
143.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
143.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
142.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
138.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
136.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
134.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
134.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
134.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
133.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
133.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
133.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
133.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
132.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
130.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
128.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
128.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
127.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
127.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
126.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
125.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
125.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
124.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
123.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
122.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
122.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
121.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
121.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
121.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
119.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
119.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
117.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
117.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
116.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
114.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
113.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
113.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
112.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
112.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
111.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
111.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
111.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
111.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
111.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
110.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
109.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
109.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
108.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
108.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
108.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
107.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
106.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
106.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
106.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
104.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
104.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
104.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
104.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
103.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
103.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
103.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
103.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
102.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
102.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
101.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
101.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
101.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
100.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
100.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
99.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
99.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
98.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
98.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
98.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
97.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
97.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
97.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
97.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
97.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
96.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
96.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
96.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
96.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
95.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
95.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
95.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
94.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
94.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
94.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
93.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
93.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
93.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
93.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
93.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
92.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
92.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
92.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
91.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
91.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
91.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
90.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
90.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
90.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
90.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
90.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
90.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
90.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
90.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
90.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
89.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
89.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
88.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
88.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
87.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
87.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
87.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
87.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
87.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
86.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
85.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
85.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
85.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
84.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
84.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
84.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
83.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
83.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
82.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
82.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
82.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
82.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
82.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
82.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
82.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
82.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
81.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
81.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
81.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
81.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
81.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
81.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
81.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
80.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
80.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
80.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
80.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
80.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
79.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
79.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
79.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
79.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
79.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
78.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
78.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
78.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
78.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
78.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
78.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
78.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
78.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
78.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
78.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
77.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
77.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
77.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
77.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
76.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
76.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
76.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
76.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
76.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
76.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
75.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
75.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
75.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
75.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
75.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
75.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
74.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
74.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
73.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
73.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
72.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
72.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
72.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
72.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
71.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
70.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
70.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
70.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
70.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
70.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
69.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
69.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
69.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
69.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
69.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
69.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
69.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
69.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
69.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
68.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
68.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
68.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
68.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
68.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
68.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
68.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
67.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
67.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
67.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
67.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
67.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
67.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
67.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
67.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
66.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
66.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
66.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
65.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
65.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
65.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
65.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
64.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
64.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
64.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
64.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
64.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
64.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
64.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
63.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
63.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
63.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
63.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
62.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
62.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
62.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
62.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
62.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
61.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
61.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
61.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
61.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
61.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
61.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
61.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
61.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
61.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
60.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
60.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
60.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
60.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
60.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
59.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
59.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
59.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
59.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
59.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
59.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
58.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
58.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
58.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
58.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
58.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
58.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
58.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
58.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
58.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
58.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
57.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
57.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
57.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
57.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
57.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
56.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
56.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
56.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
55.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
55.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
55.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
55.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
55.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
55.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
55.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
55.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
55.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
55.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
55.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
54.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
54.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
54.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
54.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
53.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
53.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
53.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
53.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
53.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
53.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
53.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
52.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
52.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
52.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
52.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
52.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
52.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
52.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
52.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
51.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
51.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
51.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
51.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
51.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
50.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
50.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
50.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
50.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
50.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
50.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
49.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
49.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
49.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
49.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
49.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
49.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
49.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
48.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
47.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
47.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
47.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
47.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
47.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
46.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
46.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
46.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
46.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
46.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
46.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
46.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
46.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
45.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
45.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
45.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
45.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
44.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
44.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
44.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
44.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
43.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
43.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
43.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
43.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
43.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
42.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
42.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
42.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
41.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
41.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
41.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
41.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
41.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
40.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
40.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
40.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
40.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
40.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
39.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
39.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
39.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
39.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
38.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
38.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
37.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
37.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
37.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
37.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
37.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
37.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
37.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
37.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
36.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
36.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
36.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
35.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
35.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
35.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
35.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
35.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
35.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
35.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
34.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
34.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
34.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
34.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
34.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
33.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
33.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
33.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
33.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
33.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
32.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
32.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
32.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
31.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
30.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
30.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
30.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
30.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
30.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
30.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
29.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
29.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
28.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
28.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
28.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
28.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
28.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
28.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
27.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
27.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
27.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
26.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
25.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
25.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
25.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
24.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
23.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
23.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
23.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
23.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
23.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
23.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
23.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
23.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
22.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
22.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
22.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
22.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
20.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
20.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
20.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
20.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
20.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
19.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
19.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
18.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
18.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
17.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
17.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
17.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
17.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
16.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
16.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
16.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
15.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
15.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
15.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
14.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
12.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
11.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
10.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
9.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
9.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
8.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
7.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
7.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
5.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITGA5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
71.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
330.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
254.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
209.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
182.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
181.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
169.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
168.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
158.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
137.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
132.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
130.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
126.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
125.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
121.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
112.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
107.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
101.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
97.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
91.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
91.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
84.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
83.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
80.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
78.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
76.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
75.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
74.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
73.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
73.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
72.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
71.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
71.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
71.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
70.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
70.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
69.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
69.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
68.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
68.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
67.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
67.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
65.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
65.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
64.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
64.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
63.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
62.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
62.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
61.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
61.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
60.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
59.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
58.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
58.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
58.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
57.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
57.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
56.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
56.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
56.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
55.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
53.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
53.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
52.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
51.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
51.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
47.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
46.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
46.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
45.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
45.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
44.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
44.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
44.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
43.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
43.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
41.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
41.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
41.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
40.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
39.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
38.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
36.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
33.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
33.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
33.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
32.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
31.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
31.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
28.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
26.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
26.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
26.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
22.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
21.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
17.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
6.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITGA5 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
123.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
110.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
90.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
77.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
72.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
71.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
55.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
52.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
51.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
46.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
43.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
42.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
41.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
39.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
39.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
39.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
38.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
38.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
37.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
36.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
34.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
34.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
33.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
32.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
32.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
32.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
32.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
31.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
31.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
30.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
29.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
29.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
29.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
29.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
29.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
28.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
28.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
28.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
28.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
28.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
27.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
27.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
26.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
26.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
26.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
26.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
25.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
25.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
25.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
24.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
24.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
23.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
23.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
23.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
22.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
22.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
22.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
22.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
21.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
21.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
21.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
21.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
20.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
20.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
19.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
19.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
19.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
19.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
19.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
19.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
19.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
18.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
18.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
18.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
18.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
18.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
18.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
17.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
17.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
17.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
17.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
16.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
16.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
16.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
15.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
15.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
15.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
15.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
15.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
15.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
15.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
14.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
14.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
14.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
14.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
14.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
14.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
14.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
14.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
14.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
14.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
13.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
13.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
13.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
13.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
13.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
13.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
13.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
13.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
13.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
13.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
13.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
13.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
13.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
13.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
13.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
13.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
13.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
13.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
12.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
12.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
12.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
12.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
12.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
12.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
12.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
12.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
12.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
11.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
11.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
11.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
11.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
11.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
11.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
11.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
11.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
11.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
11.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
11.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
11.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
11.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
11.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
11.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
10.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
10.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
10.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
10.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
10.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
10.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
10.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
10.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
10.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
10.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
10.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
10.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
10.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
10.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
9.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
9.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
9.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
9.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
9.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
9.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
9.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
9.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
9.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
8.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
8.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
8.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
8.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
8.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
8.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
8.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
8.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
8.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
8.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
8.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
8.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
7.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
7.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
7.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
7.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
7.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
7.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
7.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
7.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
7.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
7.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
7.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
7.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
7.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
7.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
6.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
6.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
6.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
6.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
6.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
6.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
6.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
6.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
6.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
6.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
6.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
6.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
6.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
6.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
6.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
6.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
5.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
5.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
5.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
5.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
5.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
5.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
5.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
5.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
5.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
5.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
5.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
5.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
5.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
5.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
4.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
4.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
4.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
4.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
3.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
3.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
3.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
3.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
3.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
3.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
2.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
2.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
1.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
1.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.1
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0069160003
Tumor
2.1
CPT0001340003
Tumor
2.0
CPT0081880003
Tumor
1.3
CPT0084560003
Tumor
1.3
CPT0023350003
Tumor
1.2
CPT0015910003
Tumor
1.0
CPT0076330003
Tumor
1.0
CPT0021240003
Tumor
1.0
CPT0012550003
Tumor
0.9
CPT0001260009
Tumor
0.9
CPT0086030003
Tumor
0.9
CPT0009000003
Tumor
0.9
CPT0092730003
Tumor
0.8
CPT0001180009
Tumor
0.8
CPT0088760003
Tumor
0.8
CPT0012080003
Tumor
0.8
CPT0079410003
Tumor
0.8
CPT0012670003
Tumor
0.8
CPT0000640003
Tumor
0.7
CPT0078510003
Tumor
0.7
CPT0077490003
Tumor
0.7
CPT0089020003
Tumor
0.7
CPT0086950003
Tumor
0.6
CPT0088630003
Tumor
0.6
CPT0065690003
Tumor
0.6
CPT0011240003
Tumor
0.6
CPT0010160003
Tumor
0.6
CPT0065750003
Tumor
0.6
CPT0066470004
Tumor
0.6
CPT0014160003
Tumor
0.6
CPT0075130003
Tumor
0.6
CPT0007860003
Tumor
0.6
CPT0092790003
Tumor
0.6
CPT0092290003
Tumor
0.5
CPT0079270003
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0063630003
Tumor
0.5
CPT0025580004
Tumor
0.5
CPT0019990003
Tumor
0.5
CPT0001220008
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0077310003
Tumor
0.4
CPT0019130003
Tumor
0.4
CPT0000780007
Tumor
0.4
CPT0075560003
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0079380003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0007320003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0089460004
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0002350011
Tumor
0.1
CPT0015730003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0086870003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0077320001
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0065930003
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0065810003
Tumor
-0.2
CPT0001550001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0092190003
Normal
-0.3
CPT0000890001
Normal
-0.3
CPT0078800003
Tumor
-0.3
CPT0025060001
Normal
-0.3
CPT0000660001
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0002370001
Normal
-0.4
CPT0025920001
Normal
-0.4
CPT0017450001
Normal
-0.4
CPT0006530001
Normal
-0.4
CPT0076350001
Normal
-0.4
CPT0065450001
Normal
-0.4
CPT0079180003
Tumor
-0.4
CPT0077140001
Normal
-0.4
CPT0000790001
Normal
-0.4
CPT0001510001
Normal
-0.4
CPT0018250001
Normal
-0.4
CPT0014470001
Normal
-0.5
CPT0012640003
Normal
-0.5
CPT0082010001
Normal
-0.5
CPT0088710001
Normal
-0.5
CPT0086830003
Normal
-0.5
CPT0013790003
Normal
-0.5
CPT0014350001
Normal
-0.5
CPT0088780001
Normal
-0.5
CPT0063640001
Normal
-0.5
CPT0069010001
Normal
-0.5
CPT0077500001
Normal
-0.5
CPT0012570003
Normal
-0.5
CPT0012920003
Normal
-0.6
CPT0026420001
Normal
-0.6
CPT0001230001
Normal
-0.6
CPT0012770003
Normal
-0.6
CPT0001350001
Normal
-0.6
CPT0012290003
Normal
-0.6
CPT0075170001
Normal
-0.6
CPT0012090003
Normal
-0.6
CPT0089040001
Normal
-0.6
CPT0002270011
Tumor
-0.6
CPT0066520001
Normal
-0.6
CPT0010170001
Normal
-0.6
CPT0023360001
Normal
-0.6
CPT0078940001
Normal
-0.6
CPT0009020003
Normal
-0.6
CPT0024680001
Normal
-0.6
CPT0007470001
Normal
-0.6
CPT0088640003
Normal
-0.6
CPT0078840001
Normal
-0.6
CPT0066430001
Normal
-0.6
CPT0086970003
Normal
-0.6
CPT0092310003
Normal
-0.6
CPT0023710001
Normal
-0.7
CPT0089480003
Normal
-0.7
CPT0078660003
Tumor
-0.7
CPT0088570001
Normal
-0.7
CPT0006950001
Normal
-0.7
CPT0088500001
Normal
-0.7
CPT0014130001
Normal
-0.7
CPT0065820001
Normal
-0.7
CPT0075570001
Normal
-0.7
CPT0081620001
Normal
-0.7
CPT0025610001
Normal
-0.8
CPT0064400001
Normal
-0.8
CPT0063330001
Normal
-0.8
CPT0009080003
Normal
-0.8
CPT0086370003
Normal
-0.8
CPT0079430001
Normal
-0.8
CPT0079000001
Normal
-0.8
CPT0006730001
Normal
-0.9
CPT0078670001
Normal
-0.9
CPT0092800003
Normal
-0.9
CPT0086890003
Normal
-0.9
CPT0087050003
Normal
-0.9
CPT0092740003
Normal
-0.9
CPT0007870001
Normal
-0.9
CPT0088920001
Normal
-1.0
CPT0088970003
Tumor
-1.2
CPT0012180003
Tumor
-1.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
