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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SAP30BP is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
29.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
27.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
25.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
22.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
21.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
20.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
19.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
18.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
18.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
17.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
16.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
15.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
15.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
14.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
13.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
13.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
13.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
13.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
13.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
13.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
12.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
11.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
11.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
11.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
11.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
10.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
10.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
10.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
10.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
10.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
10.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
10.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
10.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
9.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
9.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
9.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
9.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
8.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
5.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
5.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
2.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SAP30BP is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
38.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
38.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
35.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
34.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
34.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
33.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
33.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
33.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
33.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
32.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
31.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
31.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
31.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
30.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
30.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
29.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
29.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
29.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
29.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
28.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
28.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
28.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
28.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
28.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
28.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
28.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
28.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
28.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
27.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
27.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
27.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
27.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
27.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
27.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
27.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
27.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
27.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
27.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
27.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
26.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
26.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
26.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
26.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
26.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
26.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
26.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
25.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
25.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
25.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
25.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
25.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
25.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
25.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
25.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
25.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
25.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
25.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
25.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
25.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
25.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
25.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
25.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
25.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
24.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
24.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
24.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
24.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
24.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
24.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
24.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
24.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
24.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
24.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
24.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
24.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
24.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
24.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
24.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
24.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
24.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
24.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
24.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
24.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
24.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
23.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
23.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
23.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
23.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
23.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
23.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
23.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
23.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
23.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
23.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
23.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
23.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
23.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
23.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
23.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
23.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
23.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
23.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
23.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
23.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
23.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
23.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
23.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
23.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
22.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
22.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
22.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
22.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
22.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
22.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
22.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
22.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
22.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
22.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
22.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
22.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
22.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
22.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
22.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
22.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
22.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
22.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
22.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
22.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
22.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
22.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
22.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
22.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
22.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
22.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
21.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
21.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
21.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
21.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
21.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
21.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
21.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
21.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
21.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
21.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
21.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
21.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
21.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
21.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
21.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
21.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
21.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
21.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
21.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
21.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
21.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
21.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
21.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
21.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
21.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
21.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
21.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
21.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
21.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
21.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
21.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
21.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
21.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
21.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
21.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
20.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
20.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
20.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
20.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
20.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
20.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
20.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
20.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
20.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
20.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
20.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
20.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
20.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
20.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
20.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
20.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
20.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
20.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
20.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
20.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
20.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
20.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
20.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
20.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
20.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
20.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
20.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
20.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
20.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
20.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
20.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
20.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
20.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
20.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
20.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
20.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
20.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
20.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
20.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
20.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
20.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
20.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
20.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
19.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
19.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
19.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
19.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
19.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
19.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
19.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
19.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
19.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
19.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
19.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
19.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
19.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
19.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
19.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
19.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
19.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
19.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
19.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
19.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
19.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
19.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
19.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
19.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
19.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
19.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
19.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
19.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
19.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
19.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
19.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
19.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
19.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
19.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
19.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
19.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
19.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
19.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
19.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
19.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
19.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
19.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
19.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
19.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
19.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
19.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
18.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
18.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
18.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
18.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
18.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
18.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
18.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
18.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
18.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
18.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
18.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
18.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
18.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
18.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
18.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
18.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
18.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
18.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
18.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
18.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
18.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
18.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
18.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
18.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
18.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
18.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
18.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
18.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
18.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
18.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
18.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
18.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
17.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
17.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
17.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
17.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
17.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
17.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
17.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
17.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
17.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
17.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
17.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
17.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
17.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
17.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
17.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
17.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
17.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
17.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
17.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
17.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
17.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
17.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
17.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
17.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
17.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
17.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
17.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
17.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
17.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
17.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
17.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
17.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
17.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
17.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
17.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
17.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
17.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
17.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
17.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
17.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
17.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
16.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
16.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
16.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
16.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
16.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
16.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
16.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
16.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
16.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
16.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
16.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
16.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
16.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
16.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
16.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
16.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
16.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
16.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
16.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
16.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
16.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
16.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
16.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
16.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
15.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
15.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
15.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
15.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
15.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
15.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
15.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
15.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
15.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
15.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
15.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
15.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
15.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
15.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
15.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
15.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
15.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
15.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
15.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
15.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
15.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
15.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
14.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
14.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
14.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
14.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
14.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
14.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
14.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
14.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
14.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
14.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
14.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
14.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
14.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
14.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
14.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
14.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
14.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
14.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
14.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
14.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
14.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
13.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
13.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
13.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
13.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
13.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
13.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
13.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
13.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
13.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
13.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
13.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
13.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
13.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
13.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
12.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
12.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
12.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
12.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
12.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
12.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
11.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
11.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
11.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
11.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
11.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
11.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
11.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
10.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
10.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
10.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
10.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
10.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
10.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
10.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
9.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
9.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
9.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
8.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
8.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SAP30BP is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
34.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
33.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
29.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
28.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
28.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
27.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
27.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
27.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
26.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
25.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
25.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
25.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
25.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
25.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
24.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
24.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
24.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
24.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
23.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
23.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
23.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
23.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
22.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
22.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
22.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
22.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
22.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
22.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
21.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
21.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
21.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
21.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
21.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
21.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
20.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
20.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
19.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
19.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
19.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
19.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
19.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
19.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
19.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
19.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
18.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
18.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
18.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
18.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
18.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
18.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
18.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
17.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
17.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
17.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
17.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
17.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
17.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
16.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
16.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
16.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
16.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
15.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
15.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
15.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
15.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
15.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
15.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
14.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
14.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
14.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
14.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
14.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
13.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
13.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
12.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
12.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
11.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
11.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SAP30BP is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
48.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
47.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
46.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
46.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
41.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
40.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
36.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
36.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
36.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
36.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
35.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
35.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
35.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
34.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
34.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
34.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
33.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
33.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
33.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
32.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
32.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
31.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
31.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
31.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
31.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
31.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
30.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
30.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
30.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
30.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
30.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
30.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
30.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
30.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
30.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
29.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
29.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
29.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
29.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
29.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
28.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
28.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
28.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
28.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
28.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
27.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
27.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
27.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
27.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
27.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
27.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
27.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
27.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
27.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
27.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
26.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
26.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
26.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
26.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
26.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
26.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
26.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
26.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
26.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
26.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
26.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
26.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
26.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
25.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
25.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
25.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
25.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
25.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
25.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
25.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
25.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
24.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
24.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
24.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
24.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
24.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
24.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
24.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
24.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
24.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
24.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
24.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
24.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
24.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
23.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
23.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
23.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
23.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
23.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
23.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
23.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
23.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
23.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
23.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
23.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
23.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
23.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
23.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
23.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
23.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
23.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
23.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
23.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
23.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
23.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
23.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
23.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
22.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
22.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
22.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
22.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
22.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
22.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
22.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
22.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
22.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
22.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
22.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
22.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
22.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
21.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
21.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
21.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
21.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
21.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
21.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
21.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
21.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
21.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
21.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
20.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
20.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
20.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
20.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
20.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
20.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
20.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
20.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
20.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
20.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
19.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
19.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
19.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
19.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
19.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
19.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
19.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
19.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
19.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
19.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
19.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
18.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
18.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
18.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
18.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
18.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
18.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
18.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
18.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
17.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
17.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
17.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
17.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
17.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
17.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
17.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
17.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
16.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
16.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
16.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
16.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
16.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
16.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
16.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
16.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
16.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
16.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
16.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
16.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
16.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
16.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
16.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
16.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
16.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
15.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
15.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
15.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
15.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
15.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
15.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
15.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
15.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
15.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
15.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
15.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
15.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
14.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
14.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
14.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
14.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
14.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
14.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
14.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
13.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
13.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
13.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
13.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
13.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
13.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
13.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
13.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
12.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
12.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
12.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
11.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
10.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
10.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
8.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
7.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
7.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
6.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
5.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
4.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
3.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
3.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
1.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
1.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0017410003
Tumor
0.8
CPT0009060003
Tumor
0.6
CPT0012180003
Tumor
0.6
CPT0006440003
Tumor
0.5
CPT0088550004
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0024670003
Tumor
0.4
CPT0071150004
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0086950003
Tumor
0.3
CPT0001340003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0079300001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0079180003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0077110003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0015910003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0000870016
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0001270001
Normal
0.1
CPT0075170001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0000780007
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0020120003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0012550003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0018250001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0078660003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0069010001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0079270003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0015730003
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0025880003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0064370003
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0023350003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0011410003
Tumor
-0.1
CPT0077140001
Normal
-0.1
CPT0078840001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0078830003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0088500001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0002270011
Tumor
-0.2
CPT0078940001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0001500009
Tumor
-0.2
CPT0078800003
Tumor
-0.2
CPT0065450001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0069000003
Tumor
-0.3
CPT0000790001
Normal
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
