HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.8 nTPM
HPA Brain:33.1 nTPM
GTEx:13.8 nTPM
FANTOM5:3.0 Scaled Tags Per Million
Pig:0.8 nTPM
Mouse:11.0 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 33.1
Sample id Sample description nTPM
Hippocampus
nTPM: 33.1
2529 Female, age 94, left hemisphere 44.0
2148 Female, age 91, left hemisphere 39.4
1855 Male, age 76, left hemisphere 30.9
2621 Female, age 67, right hemisphere 29.5
1911 Female, age 85, right hemisphere 28.0
1898 Male, age 80, left hemisphere 26.6
Dentate gyrus
nTPM: 28.3
2528 Male, age 74, both hemispheres 35.3
2010 Male, age 76, both hemispheres 30.4
1927 Female, age 91, both hemispheres 26.5
2246 Female, age 85, both hemispheres 26.4
2530 Female, age 94, left hemisphere 26.4
2531 Female, age 67, both hemispheres 24.9
Entorhinal gyrus
nTPM: 27.0
2117 Female, age 91, right hemisphere 36.7
2686 Male, age 75, right hemisphere 30.1
1938 Female, age 85, left hemisphere 25.9
2764 Male, age 80, right hemisphere 25.1
2613 Female, age 94, left hemisphere 22.3
1787 Male, age 76, left hemisphere 22.0
Hippocampus, CA1
nTPM: 28.8
2527 Male, age 74, both hemispheres 42.8
2082 Female, age 91, right hemisphere 27.9
2045 Male, age 76, both hemispheres 25.8
2749 Male, age 80, left hemisphere 25.5
1873 Female, age 85, both hemispheres 22.2
Hippocampus, CA2
nTPM: 25.6
2249 Male, age 74, both hemispheres 31.9
2113 Female, age 91, right hemisphere 29.8
1963 Male, age 80, left hemisphere 28.6
2437 Female, age 94, left hemisphere 25.8
1940 Female, age 85, left hemisphere 21.9
1892 Male, age 76, both hemispheres 15.6
Hippocampus, CA3
nTPM: 26.3
2861 Female, age 67, both hemispheres 42.7
2620 Female, age 94, left hemisphere 29.0
2436 Male, age 74, both hemispheres 25.6
2137 Male, age 80, left hemisphere 22.2
1891 Female, age 85, both hemispheres 22.0
1867 Male, age 76, both hemispheres 16.5
Parahippocampal cortex
nTPM: 29.4
2692 Male, age 74, both hemispheres 46.1
2622 Female, age 67, right hemisphere 35.8
2245 Female, age 91, both hemispheres 32.7
2018 Male, age 76, both hemispheres 28.9
1990 Female, age 91, right hemisphere 27.8
1933 Female, age 85, both hemispheres 27.3
2250 Female, age 67, right hemisphere 27.2
2532 Female, age 72, left hemisphere 23.8
1850 Male, age 80, both hemispheres 23.2
2693 Female, age 94, both hemispheres 20.9
Perirhinal gyrus
nTPM: 21.8
1847 Female, age 91, left hemisphere 28.5
1794 Male, age 80, right hemisphere 25.9
2521 Female, age 94, right hemisphere 24.0
1841 Female, age 85, right hemisphere 17.5
2848 Male, age 76, right hemisphere 13.4
Subiculum
nTPM: 29.2
2619 Male, age 74, both hemispheres 44.0
2729 Female, age 91, right hemisphere 35.7
2438 Female, age 94, left hemisphere 26.5
1901 Male, age 80, both hemispheres 24.7
2042 Male, age 76, both hemispheres 22.3
1977 Female, age 85, both hemispheres 21.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 13.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.8
Samples: 197

Max nTPM: 52.1
Min nTPM: 1.9
Std nTPM: 8.1
Median nTPM: 11.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 52.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 45.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 37.3
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 36.2
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 35.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 35.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 33.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 30.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 30.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 28.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 28.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 3.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 3.0
FF:10169-103B7 60 years, female 4.1
FF:10153-102I9 76 years, female 1.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 0.8
Pig sample Sample description nTPM
Subiculum
nTPM: 0.2
Samples: 4

Max nTPM: 0.5
Min nTPM: 0.1
Sample A Female 0.2
Sample B Female 0.1
Sample C Male 0.5
Sample D Male 0.1
Dorsal hippocampus
nTPM: 0.4
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.3
Sample A Female 0.3
Sample B Female 0.6
Sample C Male 0.4
Sample D Male 0.4
Entorhinal cortex
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.0
Sample C Male 0.1
Sample D Male 0.1
Ventral hippocampus
nTPM: 0.8
Samples: 4

Max nTPM: 1.4
Min nTPM: 0.3
Sample A Female 0.8
Sample B Female 0.3
Sample C Male 1.4
Sample D Male 0.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 11.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 12.7
Min nTPM: 9.5
Sample A Male 12.7
Sample B Male 11.0
Sample C Female 10.7
Sample D Female 9.5
Hippocampal formation
nTPM: 10.9
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.7
Sample A Male 11.9
Sample B Male 11.9
Sample C Female 9.7
Sample D Female 10.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
75888748 Antisense, RP_060502_01_A02, Mouse strain C57BL/6J (56 days, male) 2.1
75197492 Antisense, RP_060502_01_A02, Mouse strain C57BL/6J (56 days, male) 1.7

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