HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:13.2 nTPM
HPA Brain:15.8 nTPM
GTEx:13.2 nTPM
FANTOM5:12.4 Scaled Tags Per Million
Pig:10.8 nTPM
Mouse:5.7 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016591
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 15.8
Sample id Sample description nTPM
Hippocampus
nTPM: 12.4
1855 Male, age 76, left hemisphere 13.5
2621 Female, age 67, right hemisphere 12.5
1911 Female, age 85, right hemisphere 12.3
2148 Female, age 91, left hemisphere 12.1
1898 Male, age 80, left hemisphere 11.9
2529 Female, age 94, left hemisphere 11.9
Dentate gyrus
nTPM: 12.6
2531 Female, age 67, both hemispheres 15.4
2246 Female, age 85, both hemispheres 13.2
2530 Female, age 94, left hemisphere 12.4
1927 Female, age 91, both hemispheres 11.8
2010 Male, age 76, both hemispheres 11.8
2528 Male, age 74, both hemispheres 11.0
Entorhinal gyrus
nTPM: 15.1
2613 Female, age 94, left hemisphere 17.9
2686 Male, age 75, right hemisphere 16.1
2764 Male, age 80, right hemisphere 15.6
1787 Male, age 76, left hemisphere 15.2
1938 Female, age 85, left hemisphere 14.9
2117 Female, age 91, right hemisphere 10.6
Hippocampus, CA1
nTPM: 12.5
2749 Male, age 80, left hemisphere 15.5
2045 Male, age 76, both hemispheres 13.1
1873 Female, age 85, both hemispheres 12.1
2082 Female, age 91, right hemisphere 11.8
2527 Male, age 74, both hemispheres 9.8
Hippocampus, CA2
nTPM: 11.7
1892 Male, age 76, both hemispheres 13.5
2113 Female, age 91, right hemisphere 12.9
1963 Male, age 80, left hemisphere 12.6
1940 Female, age 85, left hemisphere 10.8
2249 Male, age 74, both hemispheres 10.3
2437 Female, age 94, left hemisphere 10.3
Hippocampus, CA3
nTPM: 13.7
2861 Female, age 67, both hemispheres 16.9
2620 Female, age 94, left hemisphere 16.8
2137 Male, age 80, left hemisphere 15.3
1867 Male, age 76, both hemispheres 11.7
1891 Female, age 85, both hemispheres 10.6
2436 Male, age 74, both hemispheres 10.6
Parahippocampal cortex
nTPM: 13.5
2622 Female, age 67, right hemisphere 16.9
2693 Female, age 94, both hemispheres 15.3
2532 Female, age 72, left hemisphere 14.3
1933 Female, age 85, both hemispheres 14.2
2692 Male, age 74, both hemispheres 13.7
2018 Male, age 76, both hemispheres 12.9
2245 Female, age 91, both hemispheres 12.8
1850 Male, age 80, both hemispheres 12.3
1990 Female, age 91, right hemisphere 11.7
2250 Female, age 67, right hemisphere 11.0
Perirhinal gyrus
nTPM: 15.8
1794 Male, age 80, right hemisphere 18.3
1841 Female, age 85, right hemisphere 17.3
2848 Male, age 76, right hemisphere 15.8
2521 Female, age 94, right hemisphere 14.3
1847 Female, age 91, left hemisphere 13.5
Subiculum
nTPM: 11.6
1977 Female, age 85, both hemispheres 13.7
2619 Male, age 74, both hemispheres 12.7
2729 Female, age 91, right hemisphere 11.9
1901 Male, age 80, both hemispheres 11.0
2042 Male, age 76, both hemispheres 10.6
2438 Female, age 94, left hemisphere 9.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 13.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.2
Samples: 197

Max nTPM: 31.6
Min nTPM: 4.9
Std nTPM: 4.2
Median nTPM: 12.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 31.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 27.0
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 25.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 25.9
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 25.6
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 22.6
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 22.5
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 21.0
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 20.9
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 20.5
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 20.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 12.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.4
FF:10169-103B7 60 years, female 17.6
FF:10153-102I9 76 years, female 7.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 10.8
Pig sample Sample description nTPM
Subiculum
nTPM: 8.0
Samples: 4

Max nTPM: 10.1
Min nTPM: 6.1
Sample A Female 10.1
Sample B Female 6.1
Sample C Male 7.7
Sample D Male 7.9
Dorsal hippocampus
nTPM: 10.8
Samples: 4

Max nTPM: 11.8
Min nTPM: 9.7
Sample A Female 11.2
Sample B Female 11.8
Sample C Male 10.3
Sample D Male 9.7
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 10.0
Min nTPM: 7.8
Sample A Female 10.0
Sample B Female 8.3
Sample C Male 9.9
Sample D Male 7.8
Ventral hippocampus
nTPM: 9.7
Samples: 4

Max nTPM: 11.7
Min nTPM: 7.6
Sample A Female 9.2
Sample B Female 7.6
Sample C Male 10.1
Sample D Male 11.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 5.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.0
Samples: 4

Max nTPM: 6.3
Min nTPM: 4.0
Sample A Male 4.0
Sample B Male 4.9
Sample C Female 4.7
Sample D Female 6.3
Hippocampal formation
nTPM: 5.7
Samples: 4

Max nTPM: 6.4
Min nTPM: 5.1
Sample A Male 5.1
Sample B Male 5.2
Sample C Female 6.2
Sample D Female 6.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69782987 Antisense, RP_050505_04_B06, Mouse strain C57BL/6J (56 days, male) 0.3

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