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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SQSTM1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
281.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
569.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
553.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
551.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
543.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
540.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
518.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
492.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
478.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
464.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
458.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
450.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
405.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
388.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
384.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
384.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
370.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
367.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
360.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
360.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
344.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
339.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
338.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
319.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
315.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
308.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
302.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
296.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
292.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
274.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
270.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
265.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
262.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
257.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
246.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
246.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
239.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
239.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
238.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
234.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
223.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
214.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
213.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
207.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
202.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
200.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
199.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
193.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
180.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
173.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
164.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
164.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
150.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
147.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
145.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
143.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
143.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
118.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
108.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
93.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
91.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
80.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
76.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
61.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SQSTM1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
268.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
1112.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
1026.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
947.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
862.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
824.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
785.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
661.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
644.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
583.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
573.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
571.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
546.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
540.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
533.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
524.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
520.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
515.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
514.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
507.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
506.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
505.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
503.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
497.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
493.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
489.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
483.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
475.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
469.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
468.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
467.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
466.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
458.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
454.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
454.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
452.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
450.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
449.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
448.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
447.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
441.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
435.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
433.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
429.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
428.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
420.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
419.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
418.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
417.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
407.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
402.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
402.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
401.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
401.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
397.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
396.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
395.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
394.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
392.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
392.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
391.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
388.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
387.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
386.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
386.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
386.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
385.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
385.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
385.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
384.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
383.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
383.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
380.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
379.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
377.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
377.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
376.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
375.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
371.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
370.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
370.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
367.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
366.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
366.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
366.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
364.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
363.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
363.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
361.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
358.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
354.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
352.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
351.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
350.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
348.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
346.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
345.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
345.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
344.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
343.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
340.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
339.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
339.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
338.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
337.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
336.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
335.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
335.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
334.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
333.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
333.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
333.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
333.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
333.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
331.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
331.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
330.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
329.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
328.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
326.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
326.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
325.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
323.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
323.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
322.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
320.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
320.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
319.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
319.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
318.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
317.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
317.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
317.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
317.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
315.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
315.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
315.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
315.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
314.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
313.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
313.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
312.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
312.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
312.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
311.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
311.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
311.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
311.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
310.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
309.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
309.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
307.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
306.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
306.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
304.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
303.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
303.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
302.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
302.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
302.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
301.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
301.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
301.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
299.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
299.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
299.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
297.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
297.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
297.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
296.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
296.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
296.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
296.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
296.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
295.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
294.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
293.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
292.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
292.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
291.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
291.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
291.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
291.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
290.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
290.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
290.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
289.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
289.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
289.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
289.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
287.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
287.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
287.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
287.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
286.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
283.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
283.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
281.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
281.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
280.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
280.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
279.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
279.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
279.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
278.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
278.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
277.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
277.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
277.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
276.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
276.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
276.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
275.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
274.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
273.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
273.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
272.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
272.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
271.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
271.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
269.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
269.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
268.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
267.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
267.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
267.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
267.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
266.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
265.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
265.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
265.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
264.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
264.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
263.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
263.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
263.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
263.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
262.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
262.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
262.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
262.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
261.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
261.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
261.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
261.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
260.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
260.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
260.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
260.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
260.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
259.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
259.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
259.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
259.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
259.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
259.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
258.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
258.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
258.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
258.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
256.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
255.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
255.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
253.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
252.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
252.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
251.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
251.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
249.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
249.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
248.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
248.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
248.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
248.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
248.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
248.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
247.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
247.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
246.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
246.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
246.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
245.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
244.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
244.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
244.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
244.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
244.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
244.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
243.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
243.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
242.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
242.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
241.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
241.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
240.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
239.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
239.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
238.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
238.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
238.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
237.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
236.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
236.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
233.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
233.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
231.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
230.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
230.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
230.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
229.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
229.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
229.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
228.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
228.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
228.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
226.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
226.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
225.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
225.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
224.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
224.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
223.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
223.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
223.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
223.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
223.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
222.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
222.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
222.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
222.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
222.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
221.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
221.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
219.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
219.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
219.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
219.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
218.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
218.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
218.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
217.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
217.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
216.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
215.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
215.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
215.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
215.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
214.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
213.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
213.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
213.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
212.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
211.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
210.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
210.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
210.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
209.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
209.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
208.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
204.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
204.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
204.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
204.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
204.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
204.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
204.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
203.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
203.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
201.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
200.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
200.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
198.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
198.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
198.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
198.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
198.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
197.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
197.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
195.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
195.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
195.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
194.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
194.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
194.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
194.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
193.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
192.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
192.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
192.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
192.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
191.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
189.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
189.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
189.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
188.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
187.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
186.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
185.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
184.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
183.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
183.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
182.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
182.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
181.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
180.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
180.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
180.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
180.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
179.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
179.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
178.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
178.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
178.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
176.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
176.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
174.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
173.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
173.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
172.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
171.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
170.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
170.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
169.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
169.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
167.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
167.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
166.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
165.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
165.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
165.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
164.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
163.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
163.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
163.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
161.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
161.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
159.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
158.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
158.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
158.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
158.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
157.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
156.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
156.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
154.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
154.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
153.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
153.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
151.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
151.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
150.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
150.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
149.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
147.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
146.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
146.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
145.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
145.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
144.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
144.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
143.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
142.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
142.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
142.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
141.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
141.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
140.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
139.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
139.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
138.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
137.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
137.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
137.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
137.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
136.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
134.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
134.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
132.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
131.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
130.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
130.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
129.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
129.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
129.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
128.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
127.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
126.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
126.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
124.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
122.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
122.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
120.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
112.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
112.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
111.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
111.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
108.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
108.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
107.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
105.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
102.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
102.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
101.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
100.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
96.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
96.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
85.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
85.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
82.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
79.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
76.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
74.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
70.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
62.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
55.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
49.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
48.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
45.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
44.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
40.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
36.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SQSTM1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
286.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
770.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
518.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
490.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
482.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
432.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
422.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
420.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
419.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
414.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
412.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
410.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
407.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
400.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
391.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
390.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
387.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
383.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
382.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
382.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
370.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
369.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
367.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
366.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
366.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
351.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
344.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
338.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
334.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
327.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
325.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
321.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
321.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
317.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
316.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
314.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
313.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
309.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
307.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
305.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
304.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
302.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
299.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
297.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
294.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
284.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
283.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
283.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
281.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
281.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
280.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
277.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
275.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
274.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
274.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
268.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
267.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
266.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
265.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
253.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
253.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
243.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
241.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
238.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
236.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
236.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
236.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
233.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
232.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
230.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
227.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
226.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
226.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
224.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
224.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
222.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
219.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
217.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
211.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
204.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
195.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
194.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
192.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
189.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
187.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
187.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
183.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
180.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
178.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
173.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
165.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
164.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
156.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
156.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
155.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
153.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
152.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
138.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
135.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
116.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SQSTM1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
407.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
2104.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
2053.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
1826.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
1756.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
1665.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
1535.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
1450.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1429.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1419.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
1357.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
1317.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
1290.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
1272.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
1195.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
1175.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
1146.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
1144.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
1136.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
1116.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
1111.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
1054.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
991.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
984.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
956.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
929.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
917.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
914.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
865.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
857.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
845.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
820.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
790.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
752.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
734.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
700.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
694.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
659.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
644.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
627.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
618.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
616.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
594.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
581.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
570.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
566.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
562.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
560.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
531.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
529.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
528.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
527.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
521.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
520.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
518.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
516.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
511.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
509.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
506.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
502.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
500.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
498.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
488.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
487.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
486.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
485.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
473.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
467.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
466.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
463.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
459.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
454.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
452.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
450.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
450.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
449.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
446.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
445.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
441.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
440.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
439.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
439.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
437.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
433.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
430.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
429.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
428.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
426.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
419.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
412.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
411.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
411.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
411.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
408.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
405.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
404.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
399.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
395.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
395.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
394.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
389.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
389.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
387.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
387.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
387.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
384.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
383.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
383.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
380.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
371.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
365.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
360.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
356.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
356.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
351.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
351.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
349.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
348.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
346.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
341.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
337.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
335.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
331.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
328.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
326.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
325.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
325.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
324.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
324.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
323.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
322.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
321.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
321.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
321.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
320.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
319.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
315.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
314.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
313.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
311.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
311.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
310.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
307.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
306.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
305.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
304.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
303.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
303.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
302.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
302.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
299.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
299.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
297.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
296.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
293.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
287.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
285.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
283.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
280.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
280.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
280.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
278.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
273.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
272.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
272.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
271.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
271.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
270.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
267.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
267.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
266.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
263.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
260.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
258.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
257.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
254.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
254.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
253.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
253.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
252.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
247.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
247.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
247.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
246.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
246.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
244.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
243.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
242.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
242.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
237.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
237.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
234.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
234.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
231.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
229.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
229.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
228.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
228.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
227.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
225.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
223.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
222.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
222.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
220.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
218.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
215.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
214.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
213.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
212.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
211.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
211.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
209.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
207.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
205.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
205.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
202.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
198.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
195.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
195.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
194.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
192.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
190.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
188.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
187.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
186.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
186.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
185.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
184.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
177.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
172.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
172.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
171.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
171.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
170.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
168.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
165.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
163.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
163.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
157.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
155.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
154.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
154.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
150.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
148.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
147.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
146.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
146.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
145.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
136.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
135.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
135.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
134.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
134.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
132.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
129.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
120.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
120.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
120.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
119.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
114.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
114.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
113.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
113.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
112.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
109.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
102.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
102.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
101.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
100.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
99.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
97.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
94.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
92.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
89.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
89.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
85.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
71.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
70.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
67.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
56.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
39.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
33.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
18.9
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002350011
Tumor
3.3
CPT0001340003
Tumor
3.1
CPT0079270003
Tumor
2.9
CPT0025110003
Tumor
2.7
CPT0015730003
Tumor
1.5
CPT0012180003
Tumor
1.0
CPT0079180003
Tumor
0.1
CPT0020120003
Tumor
0.0
CPT0075130003
Tumor
0.0
CPT0025290003
Tumor
-0.1
CPT0012550003
Tumor
-0.1
CPT0078660003
Tumor
-0.2
CPT0020130001
Normal
-0.2
CPT0081880003
Tumor
-0.2
CPT0065750003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0078670001
Normal
-0.4
CPT0088920001
Normal
-0.4
CPT0088760003
Tumor
-0.4
CPT0065690003
Tumor
-0.4
CPT0076330003
Tumor
-0.4
CPT0079480003
Tumor
-0.5
CPT0075170001
Normal
-0.5
CPT0088780001
Normal
-0.5
CPT0001350001
Normal
-0.5
CPT0002370001
Normal
-0.5
CPT0088550004
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0088710001
Normal
-0.6
CPT0065430003
Tumor
-0.6
CPT0025170003
Tumor
-0.6
CPT0014470001
Normal
-0.6
CPT0014370004
Tumor
-0.6
CPT0063640001
Normal
-0.6
CPT0001180009
Tumor
-0.6
CPT0079410003
Tumor
-0.6
CPT0079300001
Normal
-0.6
CPT0088570001
Normal
-0.6
CPT0025880003
Tumor
-0.7
CPT0006440003
Tumor
-0.7
CPT0025350003
Tumor
-0.7
CPT0010110003
Tumor
-0.7
CPT0023350003
Tumor
-0.8
CPT0014450004
Tumor
-0.8
CPT0075720003
Tumor
-0.8
CPT0086030003
Tumor
-0.8
CPT0011410003
Tumor
-0.8
CPT0087040003
Tumor
-0.8
CPT0085670003
Tumor
-0.8
CPT0002270011
Tumor
-0.8
CPT0077310003
Tumor
-0.9
CPT0012280003
Tumor
-0.9
CPT0012900004
Tumor
-0.9
CPT0012370003
Tumor
-0.9
CPT0077490003
Tumor
-0.9
CPT0023690003
Tumor
-0.9
CPT0007320003
Tumor
-0.9
CPT0086870003
Tumor
-0.9
CPT0012670003
Tumor
-0.9
CPT0064370003
Tumor
-0.9
CPT0025230003
Tumor
-0.9
CPT0092290003
Tumor
-0.9
CPT0025580004
Tumor
-0.9
CPT0078830003
Tumor
-1.0
CPT0086820003
Tumor
-1.0
CPT0086950003
Tumor
-1.0
CPT0025050003
Tumor
-1.0
CPT0000640003
Tumor
-1.0
CPT0079380003
Tumor
-1.0
CPT0079230003
Tumor
-1.0
CPT0024670003
Tumor
-1.0
CPT0088480003
Tumor
-1.0
CPT0084560003
Tumor
-1.0
CPT0015810003
Tumor
-1.0
CPT0081600003
Tumor
-1.0
CPT0081990003
Tumor
-1.0
CPT0089460004
Tumor
-1.0
CPT0001260009
Tumor
-1.0
CPT0010120001
Normal
-1.1
CPT0078530001
Normal
-1.1
CPT0086360003
Tumor
-1.1
CPT0069000003
Tumor
-1.1
CPT0075560003
Tumor
-1.1
CPT0017410003
Tumor
-1.1
CPT0006900003
Tumor
-1.1
CPT0009000003
Tumor
-1.1
CPT0017850003
Tumor
-1.1
CPT0078990003
Tumor
-1.1
CPT0001540009
Tumor
-1.1
CPT0092160003
Tumor
-1.1
CPT0000870016
Tumor
-1.1
CPT0081620001
Normal
-1.1
CPT0009060003
Tumor
-1.2
CPT0026420001
Normal
-1.2
CPT0063320003
Tumor
-1.2
CPT0025610001
Normal
-1.2
CPT0078800003
Tumor
-1.2
CPT0066480003
Tumor
-1.2
CPT0069160003
Tumor
-1.2
CPT0089020003
Tumor
-1.2
CPT0014160003
Tumor
-1.2
CPT0078510003
Tumor
-1.2
CPT0000780007
Tumor
-1.2
CPT0087050003
Normal
-1.2
CPT0010160003
Tumor
-1.3
CPT0071150004
Tumor
-1.3
CPT0026410003
Tumor
-1.3
CPT0077500001
Normal
-1.3
CPT0086970003
Normal
-1.3
CPT0019990003
Tumor
-1.3
CPT0065870003
Tumor
-1.3
CPT0078930003
Tumor
-1.3
CPT0077320001
Normal
-1.3
CPT0011240003
Tumor
-1.3
CPT0092790003
Tumor
-1.3
CPT0066470004
Tumor
-1.3
CPT0023710001
Normal
-1.3
CPT0012080003
Tumor
-1.4
CPT0006950001
Normal
-1.4
CPT0078840001
Normal
-1.4
CPT0088630003
Tumor
-1.4
CPT0088970003
Tumor
-1.4
CPT0010170001
Normal
-1.4
CPT0007860003
Tumor
-1.4
CPT0012290003
Normal
-1.4
CPT0075570001
Normal
-1.4
CPT0088500001
Normal
-1.4
CPT0079510001
Normal
-1.4
CPT0000660001
Normal
-1.4
CPT0084590001
Normal
-1.4
CPT0018250001
Normal
-1.4
CPT0089480003
Normal
-1.4
CPT0065810003
Tumor
-1.4
CPT0023360001
Normal
-1.4
CPT0092190003
Normal
-1.4
CPT0092730003
Tumor
-1.4
CPT0089040001
Normal
-1.4
CPT0000890001
Normal
-1.4
CPT0001190001
Normal
-1.4
CPT0064400001
Normal
-1.4
CPT0006630003
Tumor
-1.5
CPT0012090003
Normal
-1.5
CPT0017450001
Normal
-1.5
CPT0012570003
Normal
-1.5
CPT0078940001
Normal
-1.5
CPT0015910003
Tumor
-1.5
CPT0001220008
Tumor
-1.5
CPT0065450001
Normal
-1.5
CPT0001270001
Normal
-1.5
CPT0012640003
Normal
-1.5
CPT0079430001
Normal
-1.5
CPT0092800003
Normal
-1.5
CPT0014350001
Normal
-1.5
CPT0009080003
Normal
-1.5
CPT0082010001
Normal
-1.5
CPT0006530001
Normal
-1.5
CPT0088640003
Normal
-1.5
CPT0012920003
Normal
-1.5
CPT0077110003
Tumor
-1.5
CPT0013790003
Normal
-1.6
CPT0069010001
Normal
-1.6
CPT0020020001
Normal
-1.6
CPT0066430001
Normal
-1.6
CPT0066520001
Normal
-1.6
CPT0079000001
Normal
-1.6
CPT0086830003
Normal
-1.6
CPT0019130003
Tumor
-1.6
CPT0012770003
Normal
-1.6
CPT0019160001
Normal
-1.6
CPT0007470001
Normal
-1.6
CPT0063330001
Normal
-1.6
CPT0001500009
Tumor
-1.6
CPT0025060001
Normal
-1.6
CPT0076350001
Normal
-1.6
CPT0000790001
Normal
-1.7
CPT0092310003
Normal
-1.7
CPT0021240003
Tumor
-1.7
CPT0024680001
Normal
-1.7
CPT0077140001
Normal
-1.7
CPT0006730001
Normal
-1.7
CPT0069190001
Normal
-1.7
CPT0065820001
Normal
-1.7
CPT0086370003
Normal
-1.7
CPT0001550001
Normal
-1.7
CPT0009020003
Normal
-1.8
CPT0014130001
Normal
-1.8
CPT0025920001
Normal
-1.8
CPT0001510001
Normal
-1.8
CPT0007870001
Normal
-1.8
CPT0086890003
Normal
-1.8
CPT0092740003
Normal
-2.0
CPT0001230001
Normal
-2.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
