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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP1R16A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
124.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
51.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
38.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
31.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
28.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
27.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
24.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
24.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
23.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
23.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
22.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
22.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
22.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
21.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
20.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
20.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
19.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
18.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
18.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
17.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
16.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
16.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
16.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
16.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
15.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
15.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
14.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
14.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
14.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
13.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
12.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
12.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
12.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
12.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
12.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
11.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
11.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
11.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
11.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
11.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
11.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
10.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
10.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
10.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
10.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
9.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
8.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
8.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
8.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
7.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
5.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
4.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP1R16A is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
44.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
43.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
37.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
36.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
35.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
34.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
34.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
33.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
31.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
30.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
30.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
29.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
27.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
27.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
26.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
25.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
25.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
24.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
24.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
23.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
22.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
22.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
22.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
22.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
22.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
21.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
21.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
21.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
20.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
20.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
20.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
20.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
20.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
20.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
20.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
20.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
20.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
20.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
20.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
20.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
20.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
20.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
19.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
19.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
19.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
19.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
19.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
19.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
19.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
19.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
19.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
18.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
18.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
18.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
18.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
18.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
18.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
18.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
18.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
18.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
18.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
17.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
17.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
17.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
17.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
17.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
17.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
17.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
17.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
17.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
16.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
16.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
16.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
16.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
16.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
16.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
16.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
16.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
16.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
16.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
16.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
16.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
15.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
15.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
15.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
15.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
15.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
15.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
15.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
15.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
15.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
15.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
15.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
15.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
15.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
15.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
15.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
15.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
15.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
15.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
15.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
15.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
15.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
15.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
15.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
14.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
14.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
14.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
14.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
14.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
14.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
14.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
14.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
14.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
14.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
14.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
14.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
14.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
14.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
14.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
14.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
14.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
13.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
13.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
13.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
13.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
13.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
13.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
13.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
13.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
13.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
13.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
13.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
13.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
13.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
13.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
13.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
13.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
13.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
13.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
13.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
13.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
13.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
13.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
13.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
13.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
13.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
13.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
13.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
13.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
13.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
13.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
13.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
13.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
12.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
12.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
12.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
12.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
12.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
12.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
12.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
12.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
12.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
12.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
12.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
12.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
12.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
12.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
12.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
12.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
12.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
12.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
12.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
12.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
12.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
12.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
12.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
12.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
12.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
12.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
12.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
12.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
12.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
12.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
12.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
11.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
11.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
11.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
11.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
11.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
11.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
11.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
11.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
11.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
11.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
11.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
11.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
11.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
11.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
11.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
11.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
11.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
11.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
11.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
11.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
11.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
11.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
11.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
10.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
10.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
10.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
10.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
10.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
10.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
10.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
10.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
10.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
10.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
10.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
10.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
10.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
10.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
10.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
10.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
10.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
10.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
10.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
10.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
10.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
10.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
10.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
10.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
10.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
10.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
10.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
10.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
10.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
10.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
10.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
10.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
9.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
9.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
9.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
9.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
9.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
9.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
9.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
9.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
9.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
9.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
9.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
9.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
9.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
9.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
9.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
9.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
9.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
9.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
9.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
9.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
9.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
9.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
9.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
9.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
9.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
9.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
9.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
9.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
9.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
9.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
9.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
9.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
8.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
8.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
8.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
8.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
8.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
8.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
8.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
8.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
8.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
8.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
8.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
8.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
8.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
8.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
8.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
8.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
8.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
8.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
8.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
8.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
8.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
8.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
8.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
8.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
8.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
8.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
8.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
7.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
7.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
7.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
7.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
7.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
7.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
7.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
7.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
7.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
7.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
7.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
7.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
7.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
7.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
7.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
7.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
7.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
7.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
7.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
7.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
7.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
7.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
7.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
7.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
7.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
7.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
7.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
7.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
6.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
6.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
6.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
6.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
6.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
6.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
6.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
6.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
6.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
6.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
6.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
6.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
6.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
6.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
6.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
6.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
6.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
6.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
6.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
6.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
6.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
6.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
6.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
6.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
6.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
6.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
6.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
6.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
5.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
5.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
5.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
5.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
5.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
5.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
5.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
5.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
5.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
5.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
5.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
5.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
5.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
5.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
5.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
5.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
5.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
5.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
5.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
5.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
5.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
4.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
4.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
4.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
4.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
4.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
4.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
4.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
4.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
4.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
4.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
4.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
4.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
4.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
4.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
3.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
3.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
3.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
3.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
3.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
3.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
3.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
3.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
3.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
2.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
2.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
2.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
2.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
2.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
2.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
2.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP1R16A is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
64.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
45.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
41.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
40.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
38.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
38.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
37.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
37.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
35.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
34.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
32.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
32.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
31.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
30.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
29.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
28.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
28.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
28.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
28.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
28.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
27.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
26.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
26.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
26.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
26.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
25.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
25.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
24.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
24.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
23.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
23.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
23.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
23.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
23.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
22.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
22.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
22.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
22.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
22.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
21.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
21.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
21.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
21.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
21.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
21.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
21.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
21.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
20.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
19.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
19.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
19.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
18.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
17.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
17.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
17.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
17.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
17.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
17.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
16.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
16.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
16.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
15.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
15.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
15.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
15.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
15.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
14.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
14.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
14.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
14.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
13.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
12.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
12.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
11.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
10.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
10.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
10.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
10.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
9.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
9.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
8.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
7.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
7.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
6.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
6.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
5.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
4.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP1R16A is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
83.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
79.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
75.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
69.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
69.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
65.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
59.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
58.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
57.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
57.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
53.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
53.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
52.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
52.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
52.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
51.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
51.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
50.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
48.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
47.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
46.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
46.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
46.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
46.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
46.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
46.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
44.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
44.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
44.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
44.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
44.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
43.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
42.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
42.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
41.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
41.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
41.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
40.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
39.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
39.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
38.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
38.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
38.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
38.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
38.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
37.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
36.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
36.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
36.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
36.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
35.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
35.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
35.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
34.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
34.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
34.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
33.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
33.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
33.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
33.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
33.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
32.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
32.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
32.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
31.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
31.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
31.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
31.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
31.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
31.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
30.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
30.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
30.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
30.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
30.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
30.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
30.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
30.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
29.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
29.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
29.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
29.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
28.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
28.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
28.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
28.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
27.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
27.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
27.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
27.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
27.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
27.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
27.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
27.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
27.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
27.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
27.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
26.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
26.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
25.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
25.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
25.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
25.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
25.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
25.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
25.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
25.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
25.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
25.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
25.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
25.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
25.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
25.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
24.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
24.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
24.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
24.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
24.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
24.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
24.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
24.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
24.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
24.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
23.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
23.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
23.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
23.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
23.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
23.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
23.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
23.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
23.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
23.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
23.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
23.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
22.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
22.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
22.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
22.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
22.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
22.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
22.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
22.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
22.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
21.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
21.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
21.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
21.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
21.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
21.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
21.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
21.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
21.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
21.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
21.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
21.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
21.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
20.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
20.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
20.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
20.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
20.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
20.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
19.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
19.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
19.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
19.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
19.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
19.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
19.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
18.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
18.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
18.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
18.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
18.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
18.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
18.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
18.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
18.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
18.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
18.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
18.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
18.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
18.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
17.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
17.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
17.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
17.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
17.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
17.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
17.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
17.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
17.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
17.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
16.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
16.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
16.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
15.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
15.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
15.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
15.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
15.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
15.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
15.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
14.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
14.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
14.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
14.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
14.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
14.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
14.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
14.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
13.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
13.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
13.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
13.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
13.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
13.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
12.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
12.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
12.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
12.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
12.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
12.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
12.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
12.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
11.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
11.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
11.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
10.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
10.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
10.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
10.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
9.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
9.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
9.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
9.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
9.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
9.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
9.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
8.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
7.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
7.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
1.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0066430001
Normal
1.0
CPT0000790001
Normal
1.0
CPT0065450001
Normal
0.9
CPT0078530001
Normal
0.8
CPT0089480003
Normal
0.8
CPT0088640003
Normal
0.7
CPT0007860003
Tumor
0.6
CPT0023710001
Normal
0.6
CPT0023350003
Tumor
0.6
CPT0077140001
Normal
0.6
CPT0088710001
Normal
0.5
CPT0088500001
Normal
0.5
CPT0006950001
Normal
0.5
CPT0026420001
Normal
0.5
CPT0089040001
Normal
0.5
CPT0088780001
Normal
0.5
CPT0092290003
Tumor
0.5
CPT0087050003
Normal
0.5
CPT0020020001
Normal
0.5
CPT0076350001
Normal
0.5
CPT0092800003
Normal
0.5
CPT0009080003
Normal
0.5
CPT0088920001
Normal
0.4
CPT0001180009
Tumor
0.4
CPT0078940001
Normal
0.4
CPT0001550001
Normal
0.4
CPT0006730001
Normal
0.4
CPT0012770003
Normal
0.4
CPT0025610001
Normal
0.4
CPT0014160003
Tumor
0.4
CPT0006530001
Normal
0.3
CPT0063640001
Normal
0.3
CPT0092740003
Normal
0.3
CPT0081620001
Normal
0.3
CPT0077500001
Normal
0.3
CPT0069010001
Normal
0.3
CPT0078840001
Normal
0.3
CPT0088480003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0007470001
Normal
0.3
CPT0023690003
Tumor
0.3
CPT0013790003
Normal
0.3
CPT0010170001
Normal
0.3
CPT0086970003
Normal
0.2
CPT0081880003
Tumor
0.2
CPT0092310003
Normal
0.2
CPT0086370003
Normal
0.2
CPT0066520001
Normal
0.2
CPT0063320003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0023360001
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0009020003
Normal
0.1
CPT0001510001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0025060001
Normal
0.1
CPT0002350011
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0011410003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0012550003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0012570003
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0088570001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0000640003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0064370003
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0024680001
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0006440003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0019130003
Tumor
-0.2
CPT0012290003
Normal
-0.2
CPT0086360003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0017850003
Tumor
-0.2
CPT0012670003
Tumor
-0.3
CPT0081990003
Tumor
-0.3
CPT0012900004
Tumor
-0.3
CPT0065690003
Tumor
-0.3
CPT0079480003
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0014450004
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0001190001
Normal
-0.3
CPT0088690003
Tumor
-0.4
CPT0087040003
Tumor
-0.4
CPT0000870016
Tumor
-0.4
CPT0001220008
Tumor
-0.4
CPT0069000003
Tumor
-0.4
CPT0025880003
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0092730003
Tumor
-0.4
CPT0002270011
Tumor
-0.4
CPT0089020003
Tumor
-0.4
CPT0078510003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0007320003
Tumor
-0.4
CPT0019990003
Tumor
-0.4
CPT0077320001
Normal
-0.5
CPT0001270001
Normal
-0.5
CPT0079300001
Normal
-0.5
CPT0017410003
Tumor
-0.5
CPT0012080003
Tumor
-0.5
CPT0088900003
Tumor
-0.5
CPT0079270003
Tumor
-0.5
CPT0026410003
Tumor
-0.5
CPT0001260009
Tumor
-0.5
CPT0014370004
Tumor
-0.6
CPT0066470004
Tumor
-0.6
CPT0078990003
Tumor
-0.6
CPT0010110003
Tumor
-0.6
CPT0024670003
Tumor
-0.6
CPT0079410003
Tumor
-0.6
CPT0012370003
Tumor
-0.6
CPT0025350003
Tumor
-0.6
CPT0079180003
Tumor
-0.6
CPT0077490003
Tumor
-0.7
CPT0075170001
Normal
-0.7
CPT0069160003
Tumor
-0.7
CPT0079510001
Normal
-0.7
CPT0092790003
Tumor
-0.7
CPT0001540009
Tumor
-0.8
CPT0086870003
Tumor
-0.8
CPT0075130003
Tumor
-0.8
CPT0084590001
Normal
-0.8
CPT0081600003
Tumor
-0.8
CPT0065870003
Tumor
-0.8
CPT0012180003
Tumor
-0.8
CPT0088630003
Tumor
-0.8
CPT0092190003
Normal
-0.8
CPT0078660003
Tumor
-0.9
CPT0009060003
Tumor
-1.0
CPT0066480003
Tumor
-1.0
CPT0088550004
Tumor
-1.1
CPT0011240003
Tumor
-1.2
CPT0084560003
Tumor
-1.2
CPT0001340003
Tumor
-1.2
CPT0088970003
Tumor
-1.5
CPT0078800003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025230003
Tumor
N/A
CPT0079230003
Tumor
N/A
CPT0015810003
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0015730003
Tumor
N/A
CPT0085670003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
