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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CPSF4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
53.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
49.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
44.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
44.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
36.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
35.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
32.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
32.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
28.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
26.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
25.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
23.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
23.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
21.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
20.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
19.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
19.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
19.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
18.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
16.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
16.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
15.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
15.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
14.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
14.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
13.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
13.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
13.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
13.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
13.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
13.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
13.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
12.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
12.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
12.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
12.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
11.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
11.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
11.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
11.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
11.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
10.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
10.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
10.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
9.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
8.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
8.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
8.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
8.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
8.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
7.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
6.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CPSF4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
38.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
33.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
29.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
27.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
24.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
24.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
23.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
23.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
23.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
23.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
23.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
22.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
22.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
22.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
22.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
22.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
22.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
21.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
21.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
21.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
21.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
20.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
20.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
20.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
20.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
20.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
20.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
20.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
19.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
19.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
19.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
19.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
19.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
19.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
19.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
18.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
18.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
18.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
18.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
18.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
18.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
17.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
17.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
17.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
17.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
17.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
17.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
17.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
17.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
16.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
16.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
16.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
16.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
16.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
16.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
16.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
16.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
16.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
16.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
16.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
16.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
16.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
15.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
15.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
15.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
15.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
15.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
15.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
15.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
15.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
15.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
15.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
15.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
15.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
15.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
15.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
15.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
15.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
15.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
15.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
15.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
14.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
14.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
14.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
14.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
14.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
14.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
14.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
14.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
14.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
14.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
14.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
14.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
14.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
14.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
14.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
14.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
14.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
14.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
14.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
14.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
14.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
14.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
14.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
14.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
14.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
14.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
14.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
14.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
14.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
14.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
14.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
14.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
14.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
14.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
14.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
14.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
14.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
14.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
14.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
14.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
14.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
14.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
14.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
14.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
14.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
14.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
14.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
14.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
14.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
14.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
14.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
14.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
14.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
13.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
13.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
13.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
13.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
13.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
13.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
13.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
13.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
13.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
13.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
13.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
13.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
13.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
13.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
13.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
13.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
13.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
13.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
13.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
13.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
13.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
13.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
13.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
13.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
13.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
13.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
13.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
13.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
13.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
13.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
13.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
13.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
13.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
13.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
13.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
13.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
13.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
13.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
13.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
13.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
13.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
13.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
13.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
13.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
13.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
13.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
13.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
13.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
13.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
13.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
13.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
13.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
13.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
13.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
12.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
12.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
12.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
12.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
12.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
12.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
12.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
12.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
12.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
12.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
12.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
12.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
12.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
12.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
12.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
12.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
12.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
12.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
12.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
12.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
12.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
12.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
12.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
12.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
12.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
12.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
12.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
12.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
12.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
12.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
12.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
12.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
12.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
12.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
12.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
12.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
12.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
12.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
12.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
12.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
12.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
12.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
12.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
12.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
12.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
12.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
12.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
12.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
12.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
12.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
12.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
12.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
12.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
12.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
12.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
12.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
12.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
12.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
11.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
11.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
11.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
11.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
11.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
11.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
11.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
11.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
11.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
11.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
11.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
11.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
11.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
11.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
11.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
11.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
11.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
11.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
11.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
11.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
11.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
11.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
11.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
11.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
11.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
11.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
11.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
11.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
11.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
11.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
11.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
11.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
11.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
11.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
11.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
11.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
11.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
11.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
11.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
11.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
11.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
11.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
11.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
11.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
11.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
11.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
10.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
10.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
10.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
10.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
10.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
10.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
10.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
10.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
10.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
10.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
10.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
10.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
10.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
10.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
10.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
10.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
10.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
10.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
10.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
10.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
10.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
10.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
10.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
10.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
10.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
10.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
10.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
10.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
10.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
9.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
9.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
9.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
9.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
9.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
9.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
9.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
9.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
9.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
9.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
9.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
9.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
9.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
9.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
9.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
9.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
9.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
9.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
9.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
9.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
9.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
9.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
9.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
8.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
8.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
8.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
8.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
8.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
8.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
8.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
8.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
8.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
8.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
8.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
8.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
8.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
8.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
8.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
7.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
7.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
7.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
7.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
6.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
6.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CPSF4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
35.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
34.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
29.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
26.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
23.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
23.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
23.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
22.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
22.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
22.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
21.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
21.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
21.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
20.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
20.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
20.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
19.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
19.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
19.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
19.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
19.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
19.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
19.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
18.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
18.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
18.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
17.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
17.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
17.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
16.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
16.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
15.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
15.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
15.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
14.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
14.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
14.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
14.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
14.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
14.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
14.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
14.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
14.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
14.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
14.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
14.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
14.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
14.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
14.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
13.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
13.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
13.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
13.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
13.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
13.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
13.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
13.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
13.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
13.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
12.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
12.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
12.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
12.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
12.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
12.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
12.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
12.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
12.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
12.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
12.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
11.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
11.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
11.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
11.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
11.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
11.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
10.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
10.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
9.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
9.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
8.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
7.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
7.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CPSF4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
54.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
46.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
40.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
39.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
37.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
36.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
35.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
34.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
34.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
32.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
31.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
31.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
31.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
30.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
30.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
29.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
29.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
28.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
28.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
28.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
28.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
28.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
28.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
28.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
27.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
27.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
27.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
27.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
27.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
26.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
26.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
26.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
25.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
25.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
25.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
25.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
25.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
24.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
24.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
23.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
23.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
23.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
23.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
23.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
22.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
22.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
21.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
21.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
21.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
21.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
21.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
21.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
21.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
21.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
21.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
20.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
20.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
20.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
20.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
20.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
20.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
20.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
20.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
20.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
20.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
19.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
19.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
19.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
19.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
19.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
19.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
19.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
19.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
19.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
19.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
19.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
19.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
19.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
19.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
18.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
18.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
18.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
18.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
18.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
18.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
18.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
18.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
18.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
18.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
17.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
17.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
17.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
17.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
17.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
17.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
17.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
17.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
17.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
17.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
17.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
17.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
16.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
16.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
16.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
16.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
16.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
16.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
16.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
16.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
16.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
16.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
16.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
16.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
16.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
16.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
16.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
16.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
15.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
15.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
15.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
15.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
15.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
15.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
15.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
15.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
15.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
15.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
15.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
15.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
15.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
15.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
15.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
15.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
15.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
14.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
14.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
14.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
14.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
14.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
14.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
14.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
14.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
14.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
14.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
14.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
13.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
13.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
13.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
13.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
13.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
13.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
13.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
13.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
13.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
13.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
13.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
13.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
13.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
13.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
13.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
13.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
13.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
13.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
13.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
13.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
13.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
12.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
12.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
12.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
12.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
12.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
12.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
12.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
12.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
12.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
12.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
12.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
12.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
11.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
11.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
11.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
11.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
11.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
11.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
11.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
11.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
11.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
11.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
11.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
11.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
11.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
11.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
11.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
11.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
11.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
10.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
10.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
10.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
10.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
10.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
10.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
10.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
10.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
10.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
10.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
9.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
9.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
9.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
9.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
9.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
9.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
9.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
9.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
9.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
9.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
8.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
8.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
8.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
8.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
8.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
8.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
8.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
7.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
7.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
7.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
7.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
7.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
5.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
5.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
5.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
3.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
3.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
2.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
0.8
CPT0009060003
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0017410003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0084560003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0088970003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0084590001
Normal
0.4
CPT0075170001
Normal
0.4
CPT0006440003
Tumor
0.4
CPT0075720003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0086950003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0014470001
Normal
0.3
CPT0010120001
Normal
0.3
CPT0075130003
Tumor
0.3
CPT0088570001
Normal
0.3
CPT0010110003
Tumor
0.3
CPT0079300001
Normal
0.3
CPT0078530001
Normal
0.3
CPT0086870003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0017450001
Normal
0.3
CPT0075570001
Normal
0.3
CPT0001270001
Normal
0.2
CPT0065870003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0066520001
Normal
0.2
CPT0001540009
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0009080003
Normal
0.2
CPT0079510001
Normal
0.2
CPT0014370004
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0077140001
Normal
0.2
CPT0088900003
Tumor
0.2
CPT0025610001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0079000001
Normal
0.2
CPT0081620001
Normal
0.2
CPT0088500001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0006950001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0001340003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0024680001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0012770003
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0018250001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0023360001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0012370003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0025060001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0012570003
Normal
0.0
CPT0026420001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0089480003
Normal
0.0
CPT0065820001
Normal
0.0
CPT0001180009
Tumor
0.0
CPT0023350003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0007870001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0069160003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0015910003
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0002270011
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0079180003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0001230001
Normal
-0.2
CPT0007860003
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0078660003
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0014160003
Tumor
-0.3
CPT0078930003
Tumor
-0.3
CPT0020120003
Tumor
-0.3
CPT0081880003
Tumor
-0.3
CPT0065690003
Tumor
-0.3
CPT0086360003
Tumor
-0.3
CPT0011410003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0019990003
Tumor
-0.4
CPT0025170003
Tumor
-0.4
CPT0015810003
Tumor
-0.4
CPT0006630003
Tumor
-0.4
CPT0064370003
Tumor
-0.4
CPT0092790003
Tumor
-0.4
CPT0065750003
Tumor
-0.5
CPT0065810003
Tumor
-0.5
CPT0015730003
Tumor
-0.5
CPT0092290003
Tumor
-0.6
CPT0086030003
Tumor
-0.6
CPT0001500009
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
