HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:27.6 nTPM
HPA Brain:13.7 nTPM
GTEx:27.6 nTPM
FANTOM5:11.1 Scaled Tags Per Million
Pig:28.8 nTPM
Mouse:4.9 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA075879
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 13.7
Sample id Sample description nTPM
Hippocampus
nTPM: 13.7
2529 Female, age 94, left hemisphere 20.0
1911 Female, age 85, right hemisphere 13.7
2621 Female, age 67, right hemisphere 13.7
1855 Male, age 76, left hemisphere 12.1
2148 Female, age 91, left hemisphere 12.0
1898 Male, age 80, left hemisphere 11.1
Dentate gyrus
nTPM: 12.0
2530 Female, age 94, left hemisphere 18.0
2528 Male, age 74, both hemispheres 13.2
2246 Female, age 85, both hemispheres 12.5
2531 Female, age 67, both hemispheres 11.0
1927 Female, age 91, both hemispheres 9.5
2010 Male, age 76, both hemispheres 7.8
Entorhinal gyrus
nTPM: 11.6
2686 Male, age 75, right hemisphere 19.1
1787 Male, age 76, left hemisphere 10.9
2764 Male, age 80, right hemisphere 10.9
2117 Female, age 91, right hemisphere 10.6
2613 Female, age 94, left hemisphere 10.1
1938 Female, age 85, left hemisphere 8.2
Hippocampus, CA1
nTPM: 10.6
2527 Male, age 74, both hemispheres 14.2
2082 Female, age 91, right hemisphere 11.2
1873 Female, age 85, both hemispheres 11.1
2045 Male, age 76, both hemispheres 8.4
2749 Male, age 80, left hemisphere 8.1
Hippocampus, CA2
nTPM: 12.3
1963 Male, age 80, left hemisphere 15.0
2437 Female, age 94, left hemisphere 14.2
2113 Female, age 91, right hemisphere 12.4
2249 Male, age 74, both hemispheres 12.4
1940 Female, age 85, left hemisphere 10.3
1892 Male, age 76, both hemispheres 9.7
Hippocampus, CA3
nTPM: 12.5
2861 Female, age 67, both hemispheres 17.3
2620 Female, age 94, left hemisphere 13.1
1891 Female, age 85, both hemispheres 12.2
1867 Male, age 76, both hemispheres 11.9
2137 Male, age 80, left hemisphere 10.3
2436 Male, age 74, both hemispheres 9.9
Parahippocampal cortex
nTPM: 11.7
2622 Female, age 67, right hemisphere 17.0
2692 Male, age 74, both hemispheres 16.2
1990 Female, age 91, right hemisphere 12.5
2250 Female, age 67, right hemisphere 11.6
2532 Female, age 72, left hemisphere 11.2
2245 Female, age 91, both hemispheres 10.8
2018 Male, age 76, both hemispheres 10.6
1850 Male, age 80, both hemispheres 10.2
2693 Female, age 94, both hemispheres 9.4
1933 Female, age 85, both hemispheres 7.6
Perirhinal gyrus
nTPM: 9.7
2848 Male, age 76, right hemisphere 10.5
1794 Male, age 80, right hemisphere 10.2
1841 Female, age 85, right hemisphere 9.6
2521 Female, age 94, right hemisphere 9.3
1847 Female, age 91, left hemisphere 8.8
Subiculum
nTPM: 12.9
2438 Female, age 94, left hemisphere 20.1
2619 Male, age 74, both hemispheres 15.3
2729 Female, age 91, right hemisphere 12.7
1901 Male, age 80, both hemispheres 10.9
2042 Male, age 76, both hemispheres 9.8
1977 Female, age 85, both hemispheres 8.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 27.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.6
Samples: 197

Max nTPM: 80.9
Min nTPM: 5.8
Std nTPM: 14.9
Median nTPM: 23.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 80.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 77.4
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 74.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 71.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 70.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 62.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 62.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 61.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 59.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 58.8
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 57.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 11.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.1
FF:10153-102I9 76 years, female 18.1
FF:10169-103B7 60 years, female 4.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 28.8
Pig sample Sample description nTPM
Subiculum
nTPM: 5.0
Samples: 4

Max nTPM: 5.3
Min nTPM: 4.3
Sample A Female 5.3
Sample B Female 5.2
Sample C Male 5.2
Sample D Male 4.3
Dorsal hippocampus
nTPM: 28.8
Samples: 4

Max nTPM: 36.3
Min nTPM: 9.7
Sample A Female 36.1
Sample B Female 32.9
Sample C Male 9.7
Sample D Male 36.3
Entorhinal cortex
nTPM: 4.5
Samples: 4

Max nTPM: 4.9
Min nTPM: 4.1
Sample A Female 4.6
Sample B Female 4.1
Sample C Male 4.9
Sample D Male 4.3
Ventral hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 12.1
Min nTPM: 7.8
Sample A Female 7.8
Sample B Female 9.2
Sample C Male 8.2
Sample D Male 12.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 4.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.9
Samples: 4

Max nTPM: 5.3
Min nTPM: 4.5
Sample A Male 5.2
Sample B Male 4.5
Sample C Female 5.3
Sample D Female 4.5
Hippocampal formation
nTPM: 3.4
Samples: 4

Max nTPM: 4.4
Min nTPM: 1.8
Sample A Male 4.2
Sample B Male 3.0
Sample C Female 1.8
Sample D Female 4.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
112202195 Antisense, RP_110421_01_D07, Mouse strain C57BL/6J (56 days, male) 0.5
100144111 Antisense, RP_110421_01_D07, Mouse strain C57BL/6J (56 days, male) 0.3

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