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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LMNA is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
199.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
160.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
113.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
109.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
98.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
97.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
73.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
62.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
60.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
54.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
54.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
53.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
51.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
51.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
48.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
47.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
47.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
46.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
44.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
43.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
43.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
42.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
42.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
42.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
40.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
37.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
37.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
36.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
36.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
36.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
35.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
35.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
34.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
33.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
32.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
32.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
31.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
30.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
30.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
30.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
29.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
28.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
28.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
27.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
27.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
26.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
26.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
25.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
25.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
24.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
23.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
23.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
23.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
23.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
23.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
19.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
18.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
16.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
16.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
15.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
15.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
11.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LMNA is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
97.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
694.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
663.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
452.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
368.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
359.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
322.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
317.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
311.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
296.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
292.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
283.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
279.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
271.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
255.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
252.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
251.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
236.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
235.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
226.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
226.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
222.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
214.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
212.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
211.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
206.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
204.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
203.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
203.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
203.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
200.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
196.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
195.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
192.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
189.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
187.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
186.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
185.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
182.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
180.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
180.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
178.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
177.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
168.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
167.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
164.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
163.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
163.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
163.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
162.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
162.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
161.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
161.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
161.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
160.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
159.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
158.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
157.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
157.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
157.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
154.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
154.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
153.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
153.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
152.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
152.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
150.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
149.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
149.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
149.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
149.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
148.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
148.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
148.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
146.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
145.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
145.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
145.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
145.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
144.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
143.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
143.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
142.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
142.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
141.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
140.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
139.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
138.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
138.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
137.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
137.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
136.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
134.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
134.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
133.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
133.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
132.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
131.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
129.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
128.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
128.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
128.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
127.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
127.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
127.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
127.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
126.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
125.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
125.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
124.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
124.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
122.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
122.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
122.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
122.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
122.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
121.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
121.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
121.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
121.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
119.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
119.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
118.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
118.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
118.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
118.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
118.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
117.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
117.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
117.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
116.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
115.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
115.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
113.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
113.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
113.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
113.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
113.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
113.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
113.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
112.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
112.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
111.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
111.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
111.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
111.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
110.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
110.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
110.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
109.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
109.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
109.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
108.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
108.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
108.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
108.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
108.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
107.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
107.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
107.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
107.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
107.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
107.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
107.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
107.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
107.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
106.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
106.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
105.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
105.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
105.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
105.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
105.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
105.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
105.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
104.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
104.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
104.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
104.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
104.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
104.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
102.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
102.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
102.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
101.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
101.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
101.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
101.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
100.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
99.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
99.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
98.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
98.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
98.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
97.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
97.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
97.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
97.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
97.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
96.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
96.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
96.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
96.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
95.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
95.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
95.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
95.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
95.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
94.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
94.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
94.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
93.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
93.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
93.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
92.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
92.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
92.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
92.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
92.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
92.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
91.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
91.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
91.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
91.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
91.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
91.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
90.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
90.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
90.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
89.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
89.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
89.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
88.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
88.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
88.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
88.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
88.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
88.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
87.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
87.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
87.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
87.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
87.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
87.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
87.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
87.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
86.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
85.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
85.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
85.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
85.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
85.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
85.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
85.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
84.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
84.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
83.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
83.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
83.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
83.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
83.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
83.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
83.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
83.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
82.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
82.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
82.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
82.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
81.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
81.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
81.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
81.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
81.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
80.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
80.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
80.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
80.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
80.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
80.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
80.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
79.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
79.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
79.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
79.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
79.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
78.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
78.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
78.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
78.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
78.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
78.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
78.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
77.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
77.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
77.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
77.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
76.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
76.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
76.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
75.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
75.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
75.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
75.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
75.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
75.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
74.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
74.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
74.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
74.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
74.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
73.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
73.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
73.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
73.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
73.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
73.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
73.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
72.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
72.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
72.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
72.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
72.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
72.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
71.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
71.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
71.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
71.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
71.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
70.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
70.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
70.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
70.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
70.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
69.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
69.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
69.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
69.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
68.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
68.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
68.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
68.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
68.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
68.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
68.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
67.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
67.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
67.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
67.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
66.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
66.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
66.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
66.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
66.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
66.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
65.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
65.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
65.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
65.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
65.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
65.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
65.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
65.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
65.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
65.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
64.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
64.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
64.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
63.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
63.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
63.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
63.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
63.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
62.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
62.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
62.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
62.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
62.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
61.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
61.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
61.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
61.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
61.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
60.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
60.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
60.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
60.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
60.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
59.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
58.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
58.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
58.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
58.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
58.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
58.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
57.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
57.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
57.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
57.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
57.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
57.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
56.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
56.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
56.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
56.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
55.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
55.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
55.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
54.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
54.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
54.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
54.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
54.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
54.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
53.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
52.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
52.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
52.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
52.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
51.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
51.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
51.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
51.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
50.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
50.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
50.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
50.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
49.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
49.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
49.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
49.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
48.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
48.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
47.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
47.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
47.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
47.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
47.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
47.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
47.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
46.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
46.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
46.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
46.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
45.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
45.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
45.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
45.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
44.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
44.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
44.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
44.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
44.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
43.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
43.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
43.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
43.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
42.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
42.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
42.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
42.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
41.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
41.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
41.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
40.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
40.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
40.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
40.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
40.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
39.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
39.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
39.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
38.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
38.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
38.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
37.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
37.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
37.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
37.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
36.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
36.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
36.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
36.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
35.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
35.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
34.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
34.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
34.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
34.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
33.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
33.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
33.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
33.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
32.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
31.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
31.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
31.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
30.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
30.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
30.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
30.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
29.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
28.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
27.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
26.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
26.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
24.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
24.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
23.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
22.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
22.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
20.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
20.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
18.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
18.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
18.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
17.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
16.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
16.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
15.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
13.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
7.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LMNA is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
134.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
434.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
410.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
350.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
334.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
301.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
273.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
269.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
254.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
230.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
224.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
208.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
198.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
193.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
192.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
180.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
180.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
179.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
173.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
169.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
168.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
166.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
160.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
157.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
155.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
153.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
152.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
151.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
150.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
149.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
144.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
141.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
140.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
138.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
138.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
136.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
135.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
135.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
134.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
132.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
131.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
129.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
129.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
128.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
127.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
127.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
125.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
125.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
124.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
123.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
123.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
121.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
121.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
119.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
118.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
117.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
117.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
117.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
116.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
112.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
111.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
110.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
108.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
107.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
107.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
104.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
104.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
103.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
97.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
96.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
95.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
95.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
93.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
91.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
91.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
88.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
85.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
83.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
81.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
80.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
79.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
78.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
78.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
77.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
71.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
70.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
70.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
68.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
68.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
68.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
67.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
62.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
60.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
59.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
59.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
58.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
56.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
44.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
40.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
36.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LMNA is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
98.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
313.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
247.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
236.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
227.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
225.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
220.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
217.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
215.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
212.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
211.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
210.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
208.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
203.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
200.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
194.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
193.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
190.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
188.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
185.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
185.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
180.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
180.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
178.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
176.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
175.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
169.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
168.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
168.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
166.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
165.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
164.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
163.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
163.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
162.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
162.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
161.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
160.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
159.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
158.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
155.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
155.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
154.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
154.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
154.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
152.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
151.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
150.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
150.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
148.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
147.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
146.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
145.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
145.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
142.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
142.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
138.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
132.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
128.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
128.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
127.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
126.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
125.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
124.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
124.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
124.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
123.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
123.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
123.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
122.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
122.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
121.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
121.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
121.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
121.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
120.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
120.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
120.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
120.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
119.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
119.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
116.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
115.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
115.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
114.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
113.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
112.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
112.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
111.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
111.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
111.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
109.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
109.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
108.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
108.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
108.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
108.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
107.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
107.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
106.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
106.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
105.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
105.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
104.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
104.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
104.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
103.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
103.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
103.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
102.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
101.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
100.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
100.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
99.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
99.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
99.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
99.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
98.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
96.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
95.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
94.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
94.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
94.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
93.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
93.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
92.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
92.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
92.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
92.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
92.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
91.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
91.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
91.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
90.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
90.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
90.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
90.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
90.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
90.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
89.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
89.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
89.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
88.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
87.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
87.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
86.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
85.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
85.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
85.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
85.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
85.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
84.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
84.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
84.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
84.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
84.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
84.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
83.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
83.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
82.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
82.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
82.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
82.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
82.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
82.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
81.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
81.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
81.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
80.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
79.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
79.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
78.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
78.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
78.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
78.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
78.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
77.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
77.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
77.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
77.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
76.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
75.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
75.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
75.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
74.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
74.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
73.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
72.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
72.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
72.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
71.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
71.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
71.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
71.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
71.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
70.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
69.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
69.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
69.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
69.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
68.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
68.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
67.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
67.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
66.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
66.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
66.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
66.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
66.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
65.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
65.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
64.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
62.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
61.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
61.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
61.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
60.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
60.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
60.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
60.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
60.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
60.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
60.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
59.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
59.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
59.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
58.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
58.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
57.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
57.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
56.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
56.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
55.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
52.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
52.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
52.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
52.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
51.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
51.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
51.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
51.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
49.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
49.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
48.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
48.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
48.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
47.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
46.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
46.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
46.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
45.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
44.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
43.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
43.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
43.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
42.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
42.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
41.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
41.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
41.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
39.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
39.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
39.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
37.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
37.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
36.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
36.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
36.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
35.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
34.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
32.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
32.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
32.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
29.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
28.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
28.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
25.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
25.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
23.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
22.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
22.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
21.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
18.7
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0014370004
Tumor
1.1
CPT0006440003
Tumor
0.9
CPT0085670003
Tumor
0.8
CPT0088630003
Tumor
0.8
CPT0077490003
Tumor
0.8
CPT0017410003
Tumor
0.8
CPT0011240003
Tumor
0.8
CPT0086870003
Tumor
0.7
CPT0075720003
Tumor
0.7
CPT0066480003
Tumor
0.7
CPT0010160003
Tumor
0.7
CPT0000780007
Tumor
0.7
CPT0092190003
Normal
0.7
CPT0088760003
Tumor
0.6
CPT0071150004
Tumor
0.6
CPT0081990003
Tumor
0.6
CPT0015910003
Tumor
0.6
CPT0012900004
Tumor
0.6
CPT0079510001
Normal
0.6
CPT0025580004
Tumor
0.6
CPT0025880003
Tumor
0.5
CPT0092730003
Tumor
0.5
CPT0012080003
Tumor
0.5
CPT0088900003
Tumor
0.5
CPT0025350003
Tumor
0.5
CPT0081600003
Tumor
0.5
CPT0088550004
Tumor
0.5
CPT0084560003
Tumor
0.5
CPT0023690003
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0077110003
Tumor
0.4
CPT0066470004
Tumor
0.4
CPT0000640003
Tumor
0.4
CPT0010120001
Normal
0.4
CPT0012370003
Tumor
0.4
CPT0065690003
Tumor
0.4
CPT0012640003
Normal
0.4
CPT0092790003
Tumor
0.4
CPT0075560003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0084590001
Normal
0.3
CPT0024680001
Normal
0.3
CPT0086030003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0079300001
Normal
0.3
CPT0075170001
Normal
0.3
CPT0079270003
Tumor
0.3
CPT0025110003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0009060003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0007860003
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0078830003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0014470001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0001270001
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0007320003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0075130003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0009080003
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0092800003
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0024670003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0077310003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0012670003
Tumor
-0.1
CPT0088690003
Tumor
-0.2
CPT0002270011
Tumor
-0.2
CPT0017450001
Normal
-0.2
CPT0078510003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0069160003
Tumor
-0.2
CPT0086370003
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0001500009
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0001540009
Tumor
-0.2
CPT0025610001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0001180009
Tumor
-0.3
CPT0026420001
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0017850003
Tumor
-0.3
CPT0078840001
Normal
-0.3
CPT0000790001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0092740003
Normal
-0.3
CPT0023360001
Normal
-0.3
CPT0079410003
Tumor
-0.3
CPT0006950001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0086360003
Tumor
-0.3
CPT0088780001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0012280003
Tumor
-0.4
CPT0012770003
Normal
-0.4
CPT0011410003
Tumor
-0.4
CPT0066430001
Normal
-0.4
CPT0020120003
Tumor
-0.4
CPT0014160003
Tumor
-0.4
CPT0087050003
Normal
-0.4
CPT0002350011
Tumor
-0.5
CPT0001350001
Normal
-0.5
CPT0079180003
Tumor
-0.5
CPT0015730003
Tumor
-0.5
CPT0081880003
Tumor
-0.5
CPT0078660003
Tumor
-0.5
CPT0001340003
Tumor
-0.6
CPT0076330003
Tumor
-0.6
CPT0063630003
Tumor
-0.6
CPT0025050003
Tumor
-0.6
CPT0012550003
Tumor
-0.7
CPT0063640001
Normal
-0.7
CPT0012180003
Tumor
-0.8
CPT0023350003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
