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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SHC1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
193.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
125.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
78.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
71.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
70.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
66.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
61.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
57.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
56.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
53.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
51.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
46.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
43.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
42.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
41.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
41.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
41.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
39.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
36.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
34.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
34.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
34.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
33.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
32.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
31.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
31.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
31.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
30.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
29.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
29.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
29.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
28.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
28.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
28.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
27.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
27.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
27.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
26.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
25.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
25.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
25.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
25.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
25.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
25.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
24.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
24.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
24.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
24.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
23.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
22.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
22.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
22.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
21.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
21.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
21.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
21.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
20.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
20.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
19.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
18.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
14.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
11.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SHC1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
87.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
506.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
317.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
285.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
227.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
227.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
225.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
225.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
182.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
180.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
180.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
178.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
175.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
175.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
173.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
171.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
170.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
169.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
166.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
163.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
162.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
160.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
160.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
160.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
159.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
159.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
155.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
155.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
151.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
149.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
149.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
147.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
146.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
146.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
145.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
144.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
144.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
143.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
143.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
143.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
142.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
141.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
141.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
140.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
140.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
140.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
137.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
137.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
136.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
136.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
135.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
134.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
132.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
131.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
131.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
131.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
131.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
131.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
128.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
128.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
128.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
127.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
127.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
127.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
127.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
126.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
126.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
126.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
125.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
125.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
125.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
125.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
124.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
124.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
124.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
124.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
123.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
123.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
122.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
122.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
122.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
120.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
119.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
119.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
119.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
118.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
118.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
118.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
117.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
117.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
117.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
117.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
117.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
117.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
117.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
116.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
116.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
116.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
116.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
116.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
115.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
115.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
115.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
115.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
115.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
114.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
114.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
114.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
114.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
114.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
113.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
113.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
113.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
112.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
112.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
112.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
112.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
112.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
110.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
110.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
110.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
109.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
108.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
108.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
108.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
108.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
108.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
107.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
107.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
107.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
107.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
107.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
106.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
106.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
105.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
105.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
105.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
105.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
105.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
105.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
104.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
104.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
104.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
104.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
104.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
103.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
103.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
102.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
102.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
102.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
101.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
101.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
100.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
100.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
100.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
100.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
100.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
99.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
99.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
99.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
99.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
99.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
99.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
99.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
98.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
98.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
98.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
97.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
97.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
97.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
97.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
97.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
96.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
96.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
96.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
96.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
96.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
96.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
96.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
96.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
96.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
96.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
96.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
95.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
95.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
95.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
95.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
95.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
95.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
95.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
95.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
95.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
95.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
94.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
94.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
94.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
94.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
94.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
94.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
94.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
93.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
93.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
93.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
92.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
92.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
92.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
92.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
92.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
92.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
92.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
92.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
92.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
91.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
91.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
91.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
91.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
90.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
90.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
90.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
90.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
90.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
89.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
89.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
89.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
89.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
89.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
89.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
89.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
88.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
88.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
88.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
88.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
88.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
87.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
87.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
87.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
87.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
87.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
87.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
87.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
86.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
86.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
86.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
86.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
86.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
86.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
85.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
85.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
85.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
85.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
85.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
85.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
84.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
84.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
84.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
84.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
84.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
84.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
84.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
84.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
83.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
83.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
82.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
82.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
82.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
81.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
81.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
81.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
81.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
81.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
81.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
81.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
81.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
81.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
80.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
80.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
80.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
80.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
79.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
79.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
79.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
79.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
79.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
79.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
79.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
79.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
79.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
79.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
79.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
79.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
78.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
78.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
78.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
77.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
77.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
77.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
77.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
77.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
77.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
77.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
77.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
76.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
76.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
76.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
75.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
75.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
75.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
75.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
75.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
75.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
75.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
75.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
74.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
74.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
74.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
74.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
73.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
73.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
73.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
73.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
73.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
72.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
72.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
72.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
72.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
72.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
72.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
72.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
72.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
72.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
71.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
71.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
71.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
71.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
71.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
70.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
70.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
70.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
70.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
70.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
70.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
70.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
69.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
69.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
69.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
69.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
69.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
69.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
69.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
68.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
68.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
68.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
68.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
68.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
68.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
68.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
68.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
67.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
67.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
67.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
67.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
67.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
66.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
66.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
66.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
66.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
66.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
65.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
64.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
64.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
64.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
64.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
64.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
64.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
64.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
64.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
64.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
63.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
63.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
63.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
63.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
63.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
62.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
62.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
61.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
61.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
61.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
61.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
61.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
61.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
60.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
60.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
60.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
60.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
60.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
60.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
60.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
59.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
59.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
59.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
59.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
59.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
58.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
58.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
58.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
58.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
57.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
57.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
57.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
57.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
57.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
57.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
57.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
56.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
56.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
56.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
56.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
56.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
56.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
55.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
55.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
55.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
55.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
55.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
55.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
55.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
55.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
54.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
54.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
54.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
54.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
54.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
54.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
54.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
53.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
52.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
52.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
52.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
51.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
51.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
51.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
51.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
51.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
51.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
51.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
51.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
51.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
50.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
50.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
50.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
49.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
49.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
49.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
48.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
48.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
47.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
47.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
47.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
46.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
46.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
46.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
46.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
45.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
45.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
45.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
45.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
44.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
44.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
44.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
44.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
44.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
43.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
43.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
43.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
42.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
42.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
42.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
41.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
41.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
41.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
40.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
39.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
39.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
39.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
38.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
38.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
38.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
38.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
38.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
38.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
37.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
37.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
37.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
36.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
35.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
35.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
34.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
33.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
33.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
33.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
33.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
32.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
32.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
32.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
31.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
29.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
28.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
27.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
25.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
25.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
25.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
24.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
24.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
24.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
23.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
22.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
21.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
18.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
17.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
15.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
9.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SHC1 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
102.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
215.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
204.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
197.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
191.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
186.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
181.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
180.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
172.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
168.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
161.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
158.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
155.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
149.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
144.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
142.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
141.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
139.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
130.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
129.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
127.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
123.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
121.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
121.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
119.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
116.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
116.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
116.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
115.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
113.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
112.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
112.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
110.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
110.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
108.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
108.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
108.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
105.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
105.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
104.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
102.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
102.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
101.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
101.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
100.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
99.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
99.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
98.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
98.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
97.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
97.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
95.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
94.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
94.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
94.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
93.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
92.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
92.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
91.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
91.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
91.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
89.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
89.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
89.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
88.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
88.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
87.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
85.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
83.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
83.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
83.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
82.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
82.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
80.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
80.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
80.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
78.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
76.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
75.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
75.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
71.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
68.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
67.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
67.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
66.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
66.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
66.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
65.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
65.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
64.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
62.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
60.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
59.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
57.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
48.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
46.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
40.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
39.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
33.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
27.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SHC1 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
341.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
148.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
142.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
132.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
127.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
123.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
116.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
114.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
107.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
104.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
104.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
103.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
102.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
98.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
97.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
95.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
95.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
95.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
93.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
93.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
86.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
86.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
86.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
85.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
84.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
82.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
82.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
80.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
80.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
80.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
80.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
78.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
77.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
77.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
76.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
75.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
74.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
74.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
74.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
74.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
74.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
74.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
74.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
73.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
73.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
72.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
71.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
71.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
70.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
69.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
69.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
69.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
68.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
68.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
67.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
66.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
66.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
66.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
66.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
66.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
65.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
65.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
65.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
64.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
64.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
63.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
63.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
63.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
63.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
63.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
62.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
61.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
60.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
60.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
59.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
59.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
59.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
58.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
58.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
58.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
57.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
57.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
57.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
56.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
56.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
56.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
56.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
56.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
55.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
55.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
55.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
55.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
54.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
54.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
54.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
53.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
53.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
53.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
53.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
52.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
52.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
52.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
51.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
51.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
51.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
51.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
51.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
50.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
50.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
50.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
49.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
49.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
49.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
49.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
49.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
48.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
48.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
48.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
48.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
48.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
48.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
47.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
47.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
47.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
46.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
46.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
46.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
45.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
45.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
45.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
45.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
45.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
44.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
43.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
43.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
43.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
42.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
42.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
42.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
42.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
42.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
42.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
42.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
42.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
41.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
41.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
41.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
41.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
40.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
40.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
40.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
40.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
40.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
39.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
39.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
39.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
39.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
39.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
38.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
38.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
38.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
38.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
37.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
37.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
37.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
37.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
37.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
37.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
36.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
36.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
36.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
36.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
36.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
36.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
36.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
35.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
35.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
35.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
35.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
35.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
35.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
35.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
35.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
35.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
35.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
34.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
34.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
34.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
34.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
34.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
34.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
34.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
34.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
33.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
33.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
33.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
33.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
33.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
33.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
32.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
32.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
32.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
32.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
32.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
31.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
31.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
31.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
31.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
31.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
31.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
31.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
30.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
30.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
30.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
30.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
30.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
30.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
29.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
29.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
29.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
29.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
29.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
29.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
29.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
29.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
29.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
29.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
28.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
28.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
28.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
28.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
28.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
27.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
27.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
27.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
27.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
27.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
26.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
26.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
26.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
26.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
26.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
26.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
26.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
26.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
26.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
26.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
25.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
25.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
25.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
25.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
24.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
24.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
24.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
24.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
24.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
24.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
24.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
23.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
23.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
23.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
21.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
21.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
20.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
20.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
20.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
20.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
19.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
18.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
18.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
17.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
17.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
16.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
16.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
15.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
15.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
13.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
12.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
10.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
10.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
1.1
CPT0063630003
Tumor
0.8
CPT0002350011
Tumor
0.8
CPT0012670003
Tumor
0.7
CPT0086950003
Tumor
0.7
CPT0001180009
Tumor
0.7
CPT0085670003
Tumor
0.7
CPT0084560003
Tumor
0.7
CPT0086820003
Tumor
0.7
CPT0021240003
Tumor
0.7
CPT0012080003
Tumor
0.6
CPT0025880003
Tumor
0.6
CPT0069000003
Tumor
0.6
CPT0081880003
Tumor
0.5
CPT0025050003
Tumor
0.5
CPT0077110003
Tumor
0.5
CPT0026410003
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0088690003
Tumor
0.5
CPT0009000003
Tumor
0.5
CPT0009060003
Tumor
0.5
CPT0079410003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0024670003
Tumor
0.4
CPT0000640003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0000780007
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0019990003
Tumor
0.4
CPT0012180003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0088550004
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0014160003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0078930003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0012550003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0075130003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0088970003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0024680001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0010170001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0020130001
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0078800003
Tumor
-0.3
CPT0079300001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0006950001
Normal
-0.3
CPT0000660001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0007870001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0079180003
Tumor
-0.3
CPT0006730001
Normal
-0.3
CPT0086830003
Normal
-0.3
CPT0000790001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0025610001
Normal
-0.4
CPT0088500001
Normal
-0.4
CPT0014130001
Normal
-0.4
CPT0078660003
Tumor
-0.4
CPT0092740003
Normal
-0.4
CPT0025920001
Normal
-0.4
CPT0089480003
Normal
-0.4
CPT0014350001
Normal
-0.4
CPT0001230001
Normal
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
