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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
347.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
226.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
68.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
30.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
28.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
20.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
18.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
18.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
16.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
15.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
14.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
12.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
12.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
12.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
11.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
11.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
10.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
9.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
8.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
8.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
7.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
6.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
6.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
6.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
6.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
5.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
5.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
5.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
5.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
4.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
4.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
3.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
3.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
3.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
3.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
2.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
2.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
2.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
1.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
1.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
1.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
1.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
1.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
215.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
1709.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
1381.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1376.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
1373.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1309.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
1164.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
1148.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
1111.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
1103.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
1094.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
1071.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
1069.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
1008.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
1007.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
965.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
956.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
938.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
936.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
925.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
921.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
887.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
868.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
810.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
806.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
796.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
783.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
780.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
760.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
755.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
753.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
731.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
729.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
720.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
716.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
706.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
688.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
678.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
677.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
675.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
672.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
668.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
664.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
657.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
649.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
645.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
645.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
641.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
629.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
624.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
619.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
615.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
612.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
602.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
586.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
580.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
577.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
571.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
570.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
567.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
547.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
546.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
546.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
524.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
522.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
520.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
514.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
502.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
501.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
500.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
499.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
496.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
493.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
478.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
466.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
464.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
462.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
461.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
461.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
459.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
457.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
449.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
448.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
444.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
434.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
432.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
431.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
419.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
418.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
416.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
410.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
401.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
398.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
398.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
396.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
395.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
393.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
393.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
393.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
389.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
389.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
386.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
384.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
375.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
375.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
371.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
369.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
367.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
364.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
360.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
356.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
353.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
347.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
338.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
337.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
336.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
336.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
335.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
332.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
330.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
328.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
327.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
326.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
325.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
318.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
317.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
315.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
314.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
313.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
310.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
308.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
308.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
302.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
302.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
300.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
296.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
295.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
295.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
293.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
285.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
283.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
282.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
282.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
282.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
281.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
279.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
278.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
275.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
272.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
271.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
267.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
266.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
263.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
258.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
258.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
255.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
254.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
254.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
244.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
244.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
242.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
239.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
238.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
237.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
236.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
233.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
229.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
228.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
227.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
225.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
221.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
220.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
219.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
219.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
217.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
217.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
216.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
215.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
209.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
209.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
208.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
201.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
200.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
198.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
197.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
196.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
195.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
194.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
193.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
192.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
190.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
189.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
187.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
186.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
185.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
180.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
180.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
177.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
177.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
175.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
175.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
172.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
172.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
168.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
168.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
165.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
164.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
161.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
161.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
159.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
156.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
155.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
153.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
152.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
152.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
151.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
149.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
148.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
146.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
145.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
143.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
143.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
142.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
139.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
138.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
137.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
137.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
135.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
135.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
132.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
131.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
130.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
130.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
128.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
128.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
127.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
126.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
125.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
125.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
124.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
124.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
124.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
123.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
123.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
120.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
119.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
118.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
115.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
113.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
112.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
112.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
111.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
111.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
111.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
109.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
109.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
107.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
107.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
107.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
107.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
107.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
107.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
106.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
105.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
104.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
101.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
101.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
101.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
100.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
100.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
99.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
99.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
97.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
96.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
96.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
96.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
94.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
93.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
93.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
92.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
91.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
91.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
89.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
89.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
89.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
87.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
86.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
86.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
85.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
85.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
84.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
84.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
84.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
83.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
83.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
83.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
82.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
77.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
76.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
75.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
75.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
73.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
72.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
71.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
70.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
70.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
66.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
66.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
66.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
65.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
64.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
64.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
63.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
62.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
61.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
60.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
60.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
60.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
59.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
59.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
58.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
58.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
58.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
58.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
57.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
57.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
56.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
56.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
55.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
55.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
55.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
55.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
54.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
54.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
52.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
51.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
51.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
51.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
51.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
50.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
50.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
50.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
49.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
49.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
49.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
49.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
48.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
47.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
47.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
47.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
46.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
46.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
45.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
45.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
44.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
42.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
42.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
41.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
41.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
41.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
40.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
40.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
40.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
39.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
39.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
38.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
37.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
36.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
33.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
33.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
33.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
33.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
32.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
32.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
32.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
32.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
31.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
30.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
29.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
29.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
28.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
28.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
28.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
27.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
27.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
26.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
26.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
26.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
26.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
25.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
25.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
24.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
24.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
24.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
24.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
23.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
23.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
23.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
23.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
23.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
22.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
22.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
22.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
22.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
21.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
21.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
21.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
20.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
20.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
20.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
19.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
19.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
19.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
18.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
16.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
16.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
16.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
15.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
15.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
15.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
15.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
15.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
15.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
15.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
15.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
14.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
14.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
13.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
13.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
13.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
13.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
12.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
12.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
12.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
12.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
12.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
12.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
12.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
11.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
11.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
11.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
11.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
11.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
11.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
11.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
10.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
10.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
10.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
9.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
9.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
9.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
9.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
9.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
8.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
8.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
8.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
8.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
8.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
8.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
8.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
8.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
7.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
7.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
6.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
6.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
6.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
6.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
6.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
6.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
6.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
6.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
6.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
5.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
5.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
5.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
5.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
5.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
5.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
4.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
4.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
4.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
4.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
4.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
4.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
4.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
3.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
3.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
3.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
3.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
3.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
3.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
3.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
3.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
3.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
3.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
2.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
2.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
2.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
1.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
1.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
1.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
181.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
869.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
699.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
662.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
651.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
588.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
564.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
564.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
520.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
482.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
435.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
428.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
424.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
404.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
401.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
396.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
382.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
363.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
346.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
332.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
331.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
300.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
280.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
278.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
273.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
260.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
254.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
254.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
250.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
248.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
240.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
231.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
231.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
228.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
228.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
223.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
222.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
211.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
199.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
199.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
192.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
188.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
171.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
164.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
161.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
154.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
153.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
145.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
120.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
117.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
116.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
113.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
112.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
88.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
88.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
84.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
81.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
80.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
78.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
76.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
72.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
71.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
65.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
58.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
52.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
49.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
47.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
46.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
42.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
38.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
36.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
36.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
36.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
35.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
34.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
31.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
29.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
29.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
26.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
26.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
25.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
25.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
23.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
22.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
18.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
17.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
16.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
15.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
15.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
14.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
14.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
14.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
10.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
7.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
7.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
6.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
5.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
342.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
2243.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
2142.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
1833.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1771.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
1724.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
1694.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
1687.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
1665.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
1659.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
1631.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
1568.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1556.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
1512.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
1464.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
1456.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
1442.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
1429.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
1416.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
1388.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1381.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
1332.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
1232.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
1217.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1210.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
1188.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
1168.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
1133.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1109.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
1034.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
955.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
954.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
945.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
934.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
930.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
924.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
904.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
888.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
857.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
841.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
839.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
816.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
802.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
774.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
763.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
755.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
750.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
739.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
738.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
736.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
717.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
705.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
663.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
661.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
649.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
631.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
620.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
616.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
614.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
613.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
598.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
576.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
575.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
567.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
566.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
560.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
548.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
545.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
532.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
531.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
514.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
495.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
491.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
478.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
446.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
428.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
421.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
411.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
408.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
401.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
379.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
367.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
335.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
330.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
325.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
320.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
314.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
303.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
296.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
294.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
294.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
285.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
281.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
279.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
276.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
275.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
273.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
267.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
264.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
252.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
251.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
246.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
226.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
223.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
212.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
212.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
209.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
203.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
199.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
198.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
198.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
192.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
190.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
189.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
189.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
188.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
186.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
185.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
181.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
180.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
177.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
169.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
169.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
165.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
164.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
158.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
151.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
149.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
149.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
149.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
147.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
145.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
139.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
137.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
134.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
131.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
130.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
128.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
126.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
125.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
124.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
123.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
122.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
121.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
120.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
118.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
116.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
116.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
116.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
114.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
114.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
113.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
113.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
113.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
111.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
106.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
104.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
99.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
96.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
95.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
90.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
89.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
88.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
85.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
84.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
83.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
82.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
81.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
79.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
78.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
77.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
75.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
71.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
71.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
69.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
67.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
65.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
65.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
65.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
64.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
64.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
62.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
61.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
59.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
59.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
59.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
58.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
57.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
57.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
56.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
55.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
55.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
55.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
53.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
53.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
53.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
52.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
52.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
51.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
51.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
46.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
45.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
45.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
44.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
44.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
43.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
42.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
41.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
40.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
40.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
38.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
37.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
35.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
35.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
31.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
31.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
31.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
30.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
30.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
30.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
29.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
29.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
29.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
28.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
28.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
27.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
27.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
27.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
27.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
27.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
27.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
26.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
25.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
25.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
23.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
23.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
22.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
21.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
21.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
20.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
19.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
18.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
18.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
17.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
17.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
16.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
16.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
16.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
16.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
15.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
14.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
14.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
14.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
14.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
14.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
13.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
12.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
12.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
12.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
12.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
11.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
11.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
10.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
10.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
9.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
8.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
8.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
8.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
7.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
6.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
6.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
5.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
5.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
4.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
3.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
2.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
2.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0017410003
Tumor
2.4
CPT0002350011
Tumor
2.0
CPT0025050003
Tumor
2.0
CPT0001540009
Tumor
1.7
CPT0001180009
Tumor
1.7
CPT0025580004
Tumor
1.6
CPT0023350003
Tumor
1.6
CPT0078830003
Tumor
1.5
CPT0000640003
Tumor
1.5
CPT0065430003
Tumor
1.5
CPT0076350001
Normal
1.4
CPT0001500009
Tumor
1.4
CPT0019990003
Tumor
1.3
CPT0020120003
Tumor
1.2
CPT0065750003
Tumor
1.2
CPT0007320003
Tumor
1.2
CPT0014160003
Tumor
1.2
CPT0012550003
Tumor
1.1
CPT0086820003
Tumor
1.0
CPT0089020003
Tumor
1.0
CPT0063320003
Tumor
1.0
CPT0086360003
Tumor
1.0
CPT0078990003
Tumor
1.0
CPT0088480003
Tumor
0.9
CPT0025230003
Tumor
0.9
CPT0012670003
Tumor
0.9
CPT0012280003
Tumor
0.9
CPT0002270011
Tumor
0.8
CPT0087040003
Tumor
0.8
CPT0079230003
Tumor
0.7
CPT0079410003
Tumor
0.7
CPT0086970003
Normal
0.7
CPT0085670003
Tumor
0.6
CPT0015730003
Tumor
0.5
CPT0092290003
Tumor
0.5
CPT0000870016
Tumor
0.5
CPT0024670003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0007860003
Tumor
0.3
CPT0001190001
Normal
0.3
CPT0001220008
Tumor
0.3
CPT0079480003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0092800003
Normal
0.2
CPT0012180003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0012090003
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0078530001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0009060003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0006530001
Normal
-0.2
CPT0011240003
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0001350001
Normal
-0.2
CPT0078940001
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0018250001
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0079380003
Tumor
-0.3
CPT0012570003
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0013790003
Normal
-0.3
CPT0023690003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0009020003
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0017450001
Normal
-0.3
CPT0012920003
Normal
-0.4
CPT0088760003
Tumor
-0.4
CPT0066480003
Tumor
-0.4
CPT0012370003
Tumor
-0.4
CPT0010110003
Tumor
-0.5
CPT0075170001
Normal
-0.5
CPT0023360001
Normal
-0.5
CPT0001550001
Normal
-0.5
CPT0088690003
Tumor
-0.5
CPT0012290003
Normal
-0.5
CPT0087050003
Normal
-0.5
CPT0015910003
Tumor
-0.5
CPT0017850003
Tumor
-0.6
CPT0012900004
Tumor
-0.6
CPT0069190001
Normal
-0.6
CPT0002370001
Normal
-0.6
CPT0077490003
Tumor
-0.6
CPT0063330001
Normal
-0.6
CPT0088780001
Normal
-0.6
CPT0084590001
Normal
-0.6
CPT0065450001
Normal
-0.6
CPT0019160001
Normal
-0.6
CPT0012640003
Normal
-0.7
CPT0065820001
Normal
-0.7
CPT0081880003
Tumor
-0.7
CPT0069000003
Tumor
-0.7
CPT0077320001
Normal
-0.7
CPT0092310003
Normal
-0.7
CPT0078930003
Tumor
-0.7
CPT0081990003
Tumor
-0.7
CPT0063640001
Normal
-0.7
CPT0078840001
Normal
-0.7
CPT0024680001
Normal
-0.8
CPT0075130003
Tumor
-0.8
CPT0079300001
Normal
-0.8
CPT0063630003
Tumor
-0.8
CPT0007870001
Normal
-0.8
CPT0000660001
Normal
-0.8
CPT0009080003
Normal
-0.8
CPT0079000001
Normal
-0.8
CPT0086890003
Normal
-0.8
CPT0006630003
Tumor
-0.9
CPT0065870003
Tumor
-0.9
CPT0010120001
Normal
-0.9
CPT0000890001
Normal
-0.9
CPT0012770003
Normal
-0.9
CPT0000790001
Normal
-0.9
CPT0023710001
Normal
-0.9
CPT0006900003
Tumor
-0.9
CPT0025920001
Normal
-0.9
CPT0007470001
Normal
-0.9
CPT0001230001
Normal
-1.0
CPT0001510001
Normal
-1.0
CPT0089460004
Tumor
-1.0
CPT0014350001
Normal
-1.0
CPT0084560003
Tumor
-1.1
CPT0088640003
Normal
-1.1
CPT0010160003
Tumor
-1.1
CPT0086830003
Normal
-1.1
CPT0010170001
Normal
-1.1
CPT0014130001
Normal
-1.1
CPT0025290003
Tumor
-1.1
CPT0000780007
Tumor
-1.1
CPT0020020001
Normal
-1.2
CPT0066430001
Normal
-1.2
CPT0081620001
Normal
-1.2
CPT0064400001
Normal
-1.2
CPT0078800003
Tumor
-1.2
CPT0088500001
Normal
-1.2
CPT0026420001
Normal
-1.3
CPT0092190003
Normal
-1.3
CPT0009000003
Tumor
-1.3
CPT0088970003
Tumor
-1.3
CPT0088570001
Normal
-1.3
CPT0025610001
Normal
-1.3
CPT0006950001
Normal
-1.3
CPT0020130001
Normal
-1.3
CPT0011410003
Tumor
-1.4
CPT0066470004
Tumor
-1.4
CPT0078670001
Normal
-1.4
CPT0086370003
Normal
-1.4
CPT0001270001
Normal
-1.5
CPT0088920001
Normal
-1.5
CPT0089480003
Normal
-1.5
CPT0081600003
Tumor
-1.6
CPT0075720003
Tumor
-1.6
CPT0076330003
Tumor
-1.6
CPT0014370004
Tumor
-1.7
CPT0088630003
Tumor
-1.7
CPT0092160003
Tumor
-1.7
CPT0026410003
Tumor
-1.8
CPT0079180003
Tumor
-1.8
CPT0001260009
Tumor
-1.8
CPT0014450004
Tumor
-1.9
CPT0065930003
Tumor
-1.9
CPT0014470001
Normal
-1.9
CPT0019130003
Tumor
-2.0
CPT0025110003
Tumor
-2.0
CPT0088900003
Tumor
-2.0
CPT0065690003
Tumor
-2.0
CPT0006440003
Tumor
-2.0
CPT0064370003
Tumor
-2.0
CPT0025170003
Tumor
-2.5
CPT0025350003
Tumor
-2.7
CPT0092740003
Normal
-2.7
CPT0086950003
Tumor
-3.0
CPT0077110003
Tumor
-3.0
CPT0001340003
Tumor
-3.2
CPT0078660003
Tumor
-3.3
CPT0088550004
Tumor
-3.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.