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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A1 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
795.1
Number of samples
349
Samples
Sample
Description
TPM
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
8719.7
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
5080.7
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
4410.4
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
3676.2
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
3338.1
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
3324.0
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
3266.5
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
3095.4
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
2927.8
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
2922.0
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
2796.9
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
2767.3
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
2717.4
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
2627.8
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
2565.3
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
2494.6
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
2479.2
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
2472.9
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
2432.6
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
2381.2
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
2363.1
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
2303.7
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
2276.6
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
2248.7
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
2232.8
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
2175.1
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
2173.9
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
2154.0
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
2130.9
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
2096.8
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
2069.4
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
2011.3
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
1977.8
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
1967.8
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
1955.4
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
1941.6
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
1872.1
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
1833.2
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
1730.4
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
1714.1
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
1713.8
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
1688.3
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
1666.9
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
1648.3
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
1643.7
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
1610.6
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
1587.3
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
1583.9
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
1558.3
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
1545.2
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
1514.3
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
1479.6
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
1465.0
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
1455.4
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
1454.9
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
1446.7
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
1414.4
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1400.2
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
1379.9
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
1371.3
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
1362.8
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
1320.6
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
1318.4
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
1308.2
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
1307.9
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
1289.9
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
1271.3
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
1270.0
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1268.9
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
1217.0
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
1199.4
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
1194.0
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1193.0
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
1184.8
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
1179.6
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
1175.1
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
1150.9
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
1137.3
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1135.3
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
1116.6
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
1103.9
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1099.5
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
1098.1
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
1096.4
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
1084.6
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
1071.3
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
1069.2
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
1068.4
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
1062.3
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
1057.9
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
1053.3
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
1037.4
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
1028.3
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1027.8
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
1026.3
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
1021.6
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
1012.8
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
998.0
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
988.8
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
985.1
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
982.2
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
979.1
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
975.8
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
975.4
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
973.8
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
971.4
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
958.5
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
955.8
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
941.2
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
923.0
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
899.7
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
889.5
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
877.6
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
872.0
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
866.5
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
858.6
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
849.4
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
849.0
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
842.3
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
841.7
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
829.5
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
824.4
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
819.5
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
817.5
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
812.7
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
807.6
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
806.0
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
797.5
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
778.0
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
757.5
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
753.8
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
750.6
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
750.2
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
746.9
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
743.3
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
742.8
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
736.1
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
723.7
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
721.8
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
713.9
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
712.1
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
702.7
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
697.8
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
693.6
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
690.5
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
686.1
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
671.5
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
665.4
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
653.4
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
651.3
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
650.7
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
631.3
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
629.1
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
627.9
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
627.1
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
627.1
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
624.0
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
619.8
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
611.9
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
607.3
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
598.5
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
590.7
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
575.3
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
573.1
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
558.1
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
557.1
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
556.3
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
556.0
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
556.0
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
549.5
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
530.1
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
529.2
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
526.6
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
519.4
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
509.4
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
509.2
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
501.2
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
500.1
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
496.6
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
489.3
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
489.3
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
489.2
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
478.7
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
474.1
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
467.1
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
466.7
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
460.2
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
459.3
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
459.0
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
457.8
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
450.4
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
448.9
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
443.9
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
441.2
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
437.0
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
428.2
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
426.4
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
425.7
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
417.6
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
416.1
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
410.3
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
405.0
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
399.9
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
395.0
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
388.0
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
385.1
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
384.7
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
376.7
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
374.4
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
372.5
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
369.8
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
366.7
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
364.8
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
362.4
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
360.6
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
360.1
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
357.8
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
355.8
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
353.6
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
351.6
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
344.4
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
343.1
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
340.9
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
332.5
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
325.9
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
317.4
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
317.1
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
313.6
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
313.3
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
305.2
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
300.8
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
300.5
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
299.8
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
299.5
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
295.8
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
295.7
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
291.0
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
287.5
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
284.0
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
283.5
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
281.2
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
273.8
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
270.9
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
270.5
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
268.8
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
263.0
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
259.5
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
258.0
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
257.8
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
257.8
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
256.2
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
254.8
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
253.0
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
252.6
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
251.5
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
248.1
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
240.5
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
229.9
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
225.5
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
221.9
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
219.1
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
215.0
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
210.7
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
195.2
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
193.7
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
192.9
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
190.9
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
190.5
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
185.5
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
184.9
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
180.6
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
180.1
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
178.8
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
174.3
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
173.9
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
169.6
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
166.5
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
159.0
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
152.5
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
151.9
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
147.2
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
147.1
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
146.9
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
144.1
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
143.0
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
142.1
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
141.0
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
135.7
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
135.1
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
134.4
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
130.5
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
128.4
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
123.5
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
114.8
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
113.6
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
110.9
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
106.0
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
105.2
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
99.9
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
99.9
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
99.9
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
99.8
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
89.6
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
88.2
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
79.4
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
78.6
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
76.5
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
76.1
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
74.4
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
71.8
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
66.8
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
64.7
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
59.5
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
53.2
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
51.1
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
48.3
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
48.0
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
43.0
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
42.9
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
38.9
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
38.9
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
36.5
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
35.3
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
34.1
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
33.4
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
33.2
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
31.2
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
30.0
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
29.6
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
28.4
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
26.1
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
23.5
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
22.9
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
21.0
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
20.3
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
19.1
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
18.0
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
17.3
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
16.9
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
15.7
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
15.4
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
14.6
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
9.9
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
9.7
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
9.4
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
9.3
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
4.2
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
4.2
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A1 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
421.4
Number of samples
81
Samples
Sample
Description
TPM
DO46400
0 years, female, NA, stage:III, dead, 719 days
2217.3
DO46350
0 years, female, NA, stage:III, dead, 886 days
2211.1
DO46374
0 years, female, NA, stage:III, dead, 1409 days
2060.5
DO46342
0 years, female, NA, stage:III, dead, 1398 days
1471.8
DO46388
0 years, female, NA, stage:III, dead, 413 days
1399.3
DO46576
0 years, female, NA, stage:III, alive, 133 days
1013.8
DO46382
0 years, female, NA, stage:IV, dead, 311 days
971.4
DO46327
0 years, female, NA, stage:III, dead, 184 days
930.7
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
916.7
DO46581
0 years, female, NA, stage:III, dead, 408 days
882.9
DO46398
0 years, female, NA, stage:III, alive, 437 days
870.2
DO46390
0 years, female, NA, stage:III, dead, 374 days
839.5
DO46354
0 years, female, NA, stage:III, dead, 843 days
758.7
DO46402
0 years, female, NA, stage:III, dead, 511 days
711.1
DO46412
0 years, female, NA, stage:III, dead, 597 days
685.7
DO46611
0 years, female, NA, stage:III, dead, 734 days
631.4
DO46366
0 years, female, NA, stage:III, dead, 2054 days
622.2
DO46546
0 years, female, NA, stage:III, dead, 1889 days
565.0
DO46380
0 years, female, NA, stage:III, dead, 1423 days
550.8
DO46404
0 years, female, NA, stage:III, dead, 690 days
550.1
DO46551
0 years, female, NA, stage:III, dead, 1055 days
502.7
DO46325
0 years, female, NA, stage:III, dead, 477 days
486.5
DO46352
0 years, female, NA, stage:III, dead, 677 days
481.7
DO46508
0 years, female, NA, stage:III, dead, 2101 days
443.4
DO46334
0 years, female, NA, stage:III, dead, 496 days
435.4
DO46396
0 years, female, NA, stage:III, dead, 583 days
429.3
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
422.8
DO46346
0 years, female, NA, stage:III, dead, 1187 days
420.4
DO46344
0 years, female, NA, stage:III, dead, 642 days
401.5
DO46463
0 years, female, NA, stage:III, dead, 2451 days
383.9
DO46384
0 years, female, NA, stage:III, dead, 614 days
370.3
DO46561
0 years, female, NA, stage:III, dead, 195 days
362.4
DO46566
0 years, female, NA, stage:III, dead, 673 days
351.7
DO46591
0 years, female, NA, stage:III, dead, 195 days
347.0
DO46368
0 years, female, NA, stage:III, dead, 2879 days
345.4
DO46568
0 years, female, NA, stage:III, dead, 320 days
338.1
DO46330
0 years, female, NA, stage:III, dead, 684 days
337.0
DO46378
0 years, female, NA, stage:III, alive, 843 days
327.0
DO46326
0 years, female, NA, stage:III, dead, 701 days
305.2
DO46358
0 years, female, NA, stage:III, dead, 423 days
302.1
DO46560
0 years, female, NA, stage:IV, dead, 286 days
298.2
DO46448
0 years, female, NA, stage:III, dead, 654 days
294.3
DO46597
0 years, female, NA, stage:III, dead, 393 days
279.7
DO46493
0 years, female, NA, stage:IV, alive, 839 days
278.6
DO46392
0 years, female, NA, stage:III, dead, 628 days
276.6
DO46364
0 years, female, NA, stage:III, dead, 806 days
271.5
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
262.1
DO46356
0 years, female, NA, stage:III, dead, 911 days
260.9
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
234.3
DO46370
0 years, female, NA, stage:III, dead, 1727 days
228.8
DO46372
0 years, female, NA, stage:III, dead, 1326 days
204.8
DO46538
0 years, female, NA, stage:III, dead, 1527 days
200.4
DO46336
0 years, female, NA, stage:IV, dead, 664 days
196.0
DO46528
0 years, female, NA, stage:III, alive, 6139 days
189.8
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
168.0
DO46571
0 years, female, NA, stage:III, dead, 243 days
156.2
DO46376
0 years, female, NA, stage:III, dead, 1430 days
151.3
DO46362
0 years, female, NA, stage:III, dead, 1639 days
146.2
DO46432
0 years, female, NA, stage:III, alive, 2218 days
133.4
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
116.5
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
115.3
DO46518
0 years, female, NA, stage:III, alive, 2960 days
115.1
DO46386
0 years, female, NA, stage:III, dead, 1162 days
108.9
DO46340
0 years, female, NA, stage:III, dead, 616 days
94.5
DO46606
0 years, female, NA, stage:III, alive, 804 days
92.8
DO46408
0 years, female, NA, stage:III, dead, 489 days
85.6
DO46436
0 years, female, NA, stage:III, alive, 3193 days
85.2
DO46468
0 years, female, NA, stage:III, alive, 2776 days
71.5
DO46333
0 years, female, NA, stage:III, dead, 359 days
53.1
DO46332
0 years, female, NA, stage:III, dead, 689 days
51.6
DO46338
0 years, female, NA, stage:III, dead, 596 days
49.7
DO46533
0 years, female, NA, stage:III, alive, 3667 days
45.5
DO46443
0 years, female, NA, stage:III, dead, 2464 days
42.1
DO46331
0 years, female, NA, stage:III, dead, 612 days
36.6
DO46588
0 years, female, NA, stage:III, dead, 438 days
32.6
DO46348
0 years, female, NA, stage:IV, dead, 287 days
23.9
DO46586
0 years, female, NA, stage:III, dead, 1019 days
9.9
DO46328
0 years, female, NA, stage:III, dead, 972 days
9.9
DO46453
0 years, female, NA, stage:III, dead, 3294 days
7.8
DO46329
0 years, female, NA, stage:III, dead, 1699 days
3.7
DO46602
0 years, female, NA, stage:III, dead, 205 days
2.5
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
2.4
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
2.0
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
1.5
285fed94-1495-448e-879b-b55de9_D2
Tumor
1.4
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
1.4
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
1.2
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
1.2
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
1.1
1a10c200-3895-4648-b951-94f99f_D2
Tumor
0.9
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
0.9
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.8
a3a26070-fb84-406a-8280-d555e6_D2
Normal
0.8
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.7
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
0.7
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
0.6
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
0.6
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
0.5
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.5
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.5
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.4
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.2
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
0.2
161317f3-1a39-438e-af45-cd2502_D2
Tumor
0.2
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
0.2
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.2
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
0.2
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.1
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
0.1
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
0.1
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.1
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
0.1
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.0
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-0.1
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-0.1
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-0.1
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.1
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
-0.1
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-0.1
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
-0.2
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-0.2
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.2
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
-0.2
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-0.3
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.3
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-0.3
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.3
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
-0.4
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
-0.4
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.5
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.5
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-0.5
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-0.5
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.5
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.5
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-0.5
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
-0.5
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.5
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
-0.6
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
-0.6
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.6
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-0.6
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.7
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-0.7
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-0.7
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.7
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.8
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-0.8
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.8
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
-0.8
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-0.8
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.8
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.9
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-0.9
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.9
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-0.9
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
-0.9
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-0.9
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
-0.9
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-1.0
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-1.0
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-1.1
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-1.1
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-1.1
e9d416e7-f661-400a-896e-388545_D2
Tumor
-1.1
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-1.2
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-1.2
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-1.2
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-1.2
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-1.3
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-1.3
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-1.3
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-1.4
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-1.4
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-1.5
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-1.7
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
-1.7
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
-1.8
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
-1.8
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-1.9
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
-2.0
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-2.1
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-2.4
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-2.4
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-2.4
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
-2.5
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-2.5
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-2.8
15524912-685a-47ce-a824-567848_D2
Tumor
-7.2
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.