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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MED27 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
31.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
30.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
29.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
28.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
28.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
27.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
27.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
26.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
26.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
25.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
25.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
25.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
24.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
24.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
24.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
23.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
23.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
21.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
20.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
20.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
20.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
20.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
19.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
19.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
19.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
18.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
17.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
17.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
17.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
17.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
16.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
16.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
16.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
16.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
16.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
16.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
14.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
14.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
14.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
14.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
13.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
13.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
13.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
13.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
12.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
12.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
11.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
11.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
11.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
11.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
11.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
11.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
10.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
9.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
9.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
9.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
8.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
4.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
2.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MED27 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
40.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
35.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
32.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
29.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
26.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
26.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
24.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
22.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
22.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
22.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
22.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
21.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
20.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
20.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
20.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
20.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
20.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
20.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
19.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
19.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
18.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
18.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
18.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
18.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
18.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
18.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
18.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
18.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
18.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
17.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
17.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
17.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
17.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
17.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
17.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
17.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
17.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
17.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
17.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
17.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
16.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
16.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
16.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
16.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
16.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
16.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
16.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
16.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
16.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
16.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
16.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
16.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
16.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
16.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
16.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
16.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
16.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
15.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
15.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
15.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
15.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
15.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
15.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
15.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
15.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
15.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
15.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
15.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
15.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
15.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
15.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
15.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
15.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
15.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
15.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
15.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
15.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
15.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
15.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
15.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
15.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
15.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
15.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
15.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
15.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
15.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
15.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
14.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
14.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
14.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
14.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
14.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
14.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
14.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
14.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
14.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
14.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
14.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
14.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
14.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
14.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
14.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
14.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
14.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
14.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
14.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
14.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
14.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
14.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
14.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
14.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
14.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
14.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
14.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
14.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
14.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
14.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
14.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
14.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
14.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
14.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
14.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
14.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
14.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
14.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
14.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
13.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
13.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
13.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
13.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
13.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
13.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
13.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
13.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
13.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
13.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
13.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
13.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
13.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
13.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
13.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
13.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
13.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
13.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
13.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
13.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
13.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
13.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
13.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
13.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
13.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
13.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
13.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
13.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
13.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
13.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
13.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
13.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
13.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
13.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
13.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
13.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
13.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
13.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
13.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
13.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
13.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
13.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
13.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
13.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
13.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
13.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
13.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
13.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
13.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
13.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
13.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
13.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
13.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
12.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
12.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
12.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
12.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
12.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
12.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
12.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
12.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
12.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
12.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
12.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
12.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
12.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
12.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
12.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
12.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
12.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
12.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
12.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
12.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
12.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
12.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
12.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
12.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
12.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
12.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
12.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
12.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
12.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
12.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
12.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
12.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
12.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
12.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
12.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
12.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
12.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
12.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
12.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
12.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
12.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
12.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
12.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
12.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
12.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
12.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
12.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
12.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
11.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
11.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
11.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
11.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
11.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
11.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
11.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
11.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
11.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
11.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
11.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
11.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
11.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
11.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
11.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
11.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
11.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
11.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
11.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
11.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
11.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
11.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
11.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
11.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
11.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
11.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
11.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
11.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
10.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
10.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
10.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
10.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
10.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
10.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
10.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
10.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
10.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
10.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
10.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
10.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
10.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
10.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
10.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
10.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
10.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
10.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
10.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
10.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
10.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
10.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
10.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
10.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
10.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
10.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
10.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
10.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
10.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
10.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
10.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
10.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
10.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
10.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
10.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
10.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
10.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
10.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
10.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
9.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
9.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
9.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
9.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
9.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
9.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
9.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
9.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
9.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
9.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
9.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
9.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
9.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
9.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
9.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
9.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
9.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
9.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
9.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
9.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
9.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
9.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
9.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
9.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
9.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
9.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
9.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
9.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
9.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
9.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
9.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
8.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
8.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
8.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
8.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
8.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
8.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
8.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
8.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
8.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
8.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
8.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
8.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
8.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
8.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
8.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
8.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
8.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
8.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
8.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
8.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
8.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
8.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
8.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
8.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
8.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
8.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
8.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
7.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
7.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
7.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
7.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
7.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
7.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
7.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
7.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
7.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
7.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
7.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
6.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
6.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
6.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
6.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
6.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
6.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
3.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MED27 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
20.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
19.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
16.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
16.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
16.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
14.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
14.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
14.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
14.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
14.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
14.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
13.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
13.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
13.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
13.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
13.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
12.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
12.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
12.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
12.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
12.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
12.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
12.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
12.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
12.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
12.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
12.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
12.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
12.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
11.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
11.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
11.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
11.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
11.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
11.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
10.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
10.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
10.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
10.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
10.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
10.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
10.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
10.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
10.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
10.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
10.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
10.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
10.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
9.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
9.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
9.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
9.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
9.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
9.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
9.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
9.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
9.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
9.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
9.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
8.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
8.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
8.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
8.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
8.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
8.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
8.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
8.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
8.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
8.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
7.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
7.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
7.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
7.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
7.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
7.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
7.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
7.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
6.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
6.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
6.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
6.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
6.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
6.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
6.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
6.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
5.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
5.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
5.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
4.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
4.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
4.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MED27 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
41.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
32.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
27.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
24.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
24.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
22.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
22.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
21.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
20.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
20.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
20.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
20.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
20.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
19.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
19.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
19.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
19.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
19.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
19.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
18.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
18.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
18.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
18.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
18.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
18.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
18.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
18.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
17.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
17.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
17.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
17.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
17.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
17.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
17.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
16.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
16.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
16.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
16.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
16.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
16.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
16.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
16.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
16.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
16.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
16.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
16.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
16.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
15.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
15.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
15.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
15.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
15.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
15.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
15.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
15.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
15.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
15.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
15.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
15.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
15.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
15.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
15.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
15.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
15.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
15.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
15.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
14.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
14.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
14.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
14.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
14.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
14.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
14.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
14.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
14.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
14.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
14.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
14.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
14.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
14.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
14.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
14.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
14.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
14.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
14.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
14.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
14.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
14.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
13.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
13.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
13.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
13.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
13.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
13.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
13.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
13.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
13.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
13.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
13.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
13.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
13.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
13.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
13.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
13.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
12.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
12.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
12.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
12.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
12.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
12.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
12.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
12.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
12.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
12.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
12.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
12.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
12.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
12.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
12.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
12.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
12.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
12.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
12.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
12.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
11.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
11.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
11.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
11.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
11.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
11.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
11.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
11.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
11.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
11.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
11.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
11.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
11.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
11.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
11.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
11.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
11.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
11.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
11.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
10.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
10.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
10.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
10.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
10.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
10.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
10.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
10.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
10.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
10.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
10.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
10.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
10.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
10.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
10.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
10.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
10.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
10.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
10.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
9.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
9.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
9.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
9.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
9.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
9.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
9.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
9.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
9.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
9.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
9.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
9.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
9.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
9.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
9.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
9.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
9.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
9.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
9.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
9.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
8.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
8.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
8.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
8.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
8.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
8.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
8.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
7.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
7.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
7.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
7.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
7.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
7.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
7.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
6.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
6.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
5.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
5.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
5.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
5.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
5.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
5.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
5.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
5.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
4.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
4.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
4.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
4.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
4.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
3.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
3.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
3.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
3.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
1.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0077310003
Tumor
1.8
CPT0064370003
Tumor
1.4
CPT0011240003
Tumor
0.8
CPT0087040003
Tumor
0.8
CPT0001340003
Tumor
0.7
CPT0006630003
Tumor
0.6
CPT0092790003
Tumor
0.6
CPT0079380003
Tumor
0.5
CPT0012180003
Tumor
0.5
CPT0085670003
Tumor
0.5
CPT0077110003
Tumor
0.5
CPT0063320003
Tumor
0.5
CPT0069160003
Tumor
0.5
CPT0081600003
Tumor
0.5
CPT0024680001
Normal
0.5
CPT0010110003
Tumor
0.5
CPT0088630003
Tumor
0.5
CPT0086890003
Normal
0.4
CPT0078660003
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0009060003
Tumor
0.4
CPT0063330001
Normal
0.4
CPT0088900003
Tumor
0.4
CPT0010120001
Normal
0.4
CPT0001500009
Tumor
0.4
CPT0092730003
Tumor
0.4
CPT0017850003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0001190001
Normal
0.3
CPT0088760003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0082010001
Normal
0.2
CPT0025580004
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0007860003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0088640003
Normal
0.2
CPT0075570001
Normal
0.1
CPT0075170001
Normal
0.1
CPT0079510001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0069190001
Normal
0.1
CPT0002350011
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0021240003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0012080003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0009020003
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0001540009
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0024670003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0011410003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0012670003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0065750003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0076350001
Normal
-0.2
CPT0078510003
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0086370003
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0014450004
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0007320003
Tumor
-0.2
CPT0001510001
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0006900003
Tumor
-0.2
CPT0081880003
Tumor
-0.2
CPT0086870003
Tumor
-0.2
CPT0025610001
Normal
-0.3
CPT0013790003
Normal
-0.3
CPT0012920003
Normal
-0.3
CPT0084590001
Normal
-0.3
CPT0075720003
Tumor
-0.3
CPT0081990003
Tumor
-0.3
CPT0078840001
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0084560003
Tumor
-0.3
CPT0009080003
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0088550004
Tumor
-0.3
CPT0089460004
Tumor
-0.3
CPT0092800003
Normal
-0.3
CPT0092290003
Tumor
-0.3
CPT0014160003
Tumor
-0.4
CPT0092310003
Normal
-0.4
CPT0089040001
Normal
-0.4
CPT0023710001
Normal
-0.4
CPT0088710001
Normal
-0.4
CPT0078530001
Normal
-0.4
CPT0025060001
Normal
-0.4
CPT0000640003
Tumor
-0.4
CPT0069010001
Normal
-0.4
CPT0007470001
Normal
-0.4
CPT0012770003
Normal
-0.4
CPT0063640001
Normal
-0.4
CPT0079270003
Tumor
-0.5
CPT0012900004
Tumor
-0.5
CPT0006730001
Normal
-0.5
CPT0092160003
Tumor
-0.5
CPT0025110003
Tumor
-0.5
CPT0079410003
Tumor
-0.6
CPT0086830003
Normal
-0.6
CPT0006950001
Normal
-0.6
CPT0092740003
Normal
-0.6
CPT0014470001
Normal
-0.7
CPT0064400001
Normal
-0.7
CPT0088920001
Normal
-0.8
CPT0086970003
Normal
-0.8
CPT0086950003
Tumor
-0.8
CPT0088570001
Normal
-0.8
CPT0002270011
Tumor
-0.8
CPT0092190003
Normal
-0.9
CPT0010170001
Normal
-0.9
CPT0023350003
Tumor
-1.0
CPT0077320001
Normal
-1.1
CPT0087050003
Normal
-1.2
CPT0023360001
Normal
-1.2
CPT0079430001
Normal
-2.0
CPT0026410003
Tumor
N/A
CPT0019130003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0006440003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0079000001
Normal
N/A
CPT0006530001
Normal
N/A
CPT0019160001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0078990003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0000890001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
