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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MED27 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
45.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
40.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
36.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
25.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
23.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
22.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
22.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
20.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
20.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
19.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
19.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
19.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
19.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
19.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
17.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
17.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
17.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
17.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
17.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
17.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
16.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
16.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
16.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
15.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
15.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
15.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
14.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
14.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
14.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
14.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
14.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
14.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
14.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
14.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
13.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
13.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
13.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
13.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
13.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
13.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
13.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
13.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
13.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
13.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
12.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
12.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
12.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
12.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
12.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
12.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
12.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
12.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
12.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
12.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
11.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
11.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
11.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
11.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
11.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
11.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
11.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
11.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
11.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
11.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
11.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
11.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
11.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
11.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
11.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
11.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
11.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
11.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
11.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
11.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
11.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
10.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
10.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
10.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
10.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
10.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
10.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
10.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
10.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
10.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
10.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
10.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
10.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
10.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
10.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
10.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
10.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
10.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
10.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
10.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
10.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
10.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
10.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
10.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
10.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
10.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
10.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
9.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
9.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
9.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
9.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
9.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
9.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
9.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
9.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
9.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
9.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
9.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
9.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
9.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
9.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
9.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
9.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
9.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
9.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
9.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
9.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
9.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
9.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
9.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
9.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
9.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
9.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
9.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
9.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
9.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
9.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
9.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
9.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
9.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
9.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
9.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
9.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
9.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
8.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
8.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
8.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
8.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
8.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
8.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
8.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
8.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
8.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
8.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
8.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
8.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
8.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
8.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
8.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
8.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
8.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
8.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
8.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
8.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
8.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
8.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
8.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
8.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
8.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
8.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
8.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
8.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
8.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
8.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
7.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
7.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
7.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
7.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
7.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
7.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
7.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
7.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
7.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
7.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
7.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
7.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
7.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
7.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
7.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
7.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
7.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
7.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
7.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
7.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
7.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
7.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
7.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
7.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
7.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
7.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
7.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
7.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
7.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
7.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
7.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
7.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
7.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
7.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
7.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
7.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
7.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
7.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
7.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
7.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
7.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
7.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
6.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
6.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
6.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
6.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
6.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
6.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
6.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
6.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
6.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
6.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
6.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
6.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
6.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
6.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
6.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
6.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
6.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
6.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
6.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
6.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
6.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
6.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
6.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
6.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
6.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
6.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
6.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
6.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
6.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
6.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
6.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
6.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
6.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
6.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
6.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
6.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
6.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
6.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
6.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
6.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
6.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
6.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
6.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
6.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
6.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
6.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
6.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
5.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
5.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
5.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
5.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
5.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
5.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
5.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
5.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
5.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
5.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
5.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
5.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
5.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
5.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
5.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
5.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
5.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
5.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
5.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
5.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
5.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
5.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
5.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
5.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
5.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
5.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
5.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
5.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
5.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
5.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
5.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
5.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
5.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
5.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
5.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
4.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
4.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
4.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
4.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
4.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
4.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
4.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
4.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
4.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
4.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
4.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
4.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
4.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
4.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
4.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
4.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
4.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
4.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
4.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
4.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
4.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
4.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
4.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
3.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
3.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
3.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
3.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
3.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
3.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
2.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
2.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MED27 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4.9
Number of samples
231
Samples
Sample
Description
TPM
DO50844
0 years, male, NA, stage:4, alive, 300 days
20.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
19.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
13.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
13.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
13.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
11.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
9.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
9.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
9.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
9.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
8.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
8.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
8.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
8.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
8.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
8.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
8.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
8.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
8.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
7.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
7.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
7.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
7.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
7.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
7.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
6.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
6.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
6.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
6.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
6.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
6.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
6.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
6.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
6.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
6.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
6.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
6.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
6.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
6.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
6.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
6.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
6.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
6.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
6.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
6.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
6.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
6.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
6.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
6.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
6.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
6.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
6.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
6.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
6.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
6.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
6.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
5.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
5.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
5.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
5.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
5.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
5.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
5.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
5.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
5.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
5.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
5.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
5.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
5.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
5.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
5.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
5.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
5.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
5.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
5.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
5.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
5.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
5.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
5.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
5.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
5.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
5.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
5.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
5.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
5.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
5.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
5.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
5.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
5.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
5.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
5.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
5.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
5.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
5.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
5.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
5.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
4.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
4.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
4.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
4.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
4.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
4.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
4.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
4.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
4.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
4.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
4.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
4.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
4.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
4.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
4.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
4.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
4.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
4.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
4.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
4.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
4.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
4.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
4.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
4.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
4.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
4.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
4.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
4.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
4.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
4.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
4.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
4.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
4.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
4.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
4.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
4.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
4.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
4.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
4.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
4.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
3.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
3.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
3.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
3.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
3.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
3.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
3.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
3.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
3.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
3.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
3.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
3.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
3.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
3.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
3.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
3.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
3.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
3.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
3.5
DO50793
0 years, male, NA, stage:4, alive, 540 days
3.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
3.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
3.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
3.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
3.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
3.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
3.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
3.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
3.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
3.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
3.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
3.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
3.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
3.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
3.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
3.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
3.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
3.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
3.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
3.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
3.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
3.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
3.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
3.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
3.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
3.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
3.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
3.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
3.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
3.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
3.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
3.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
2.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
2.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
2.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
2.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
2.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
2.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
2.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
2.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
2.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
2.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
2.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
2.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
2.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
2.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
2.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
2.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
2.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
2.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
2.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
2.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
2.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
2.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
2.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
2.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
2.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
2.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
2.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
2.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
2.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
2.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
2.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
2.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
2.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
2.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
2.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
2.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
1.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
1.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
1.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
1.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
1.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
967
Tumor
1.4
131
Tumor
1.4
965
Tumor
1.2
497
Tumor
1.0
1013
Tumor
1.0
957
Tumor
1.0
411
Tumor
0.9
123
Tumor
0.9
355
Tumor
0.8
727
Tumor
0.7
983
Tumor
0.7
977
Tumor
0.7
463
Tumor
0.7
943
Tumor
0.7
343
Tumor
0.7
473
Tumor
0.6
923
Tumor
0.6
953
Tumor
0.6
715
Tumor
0.6
285
Tumor
0.6
743
Tumor
0.6
425
Tumor
0.6
777
Tumor
0.6
533
Tumor
0.6
641
Tumor
0.6
741
Tumor
0.6
465
Tumor
0.5
125
Tumor
0.5
695
Tumor
0.5
467
Tumor
0.5
351
Tumor
0.5
283
Tumor
0.5
341
Tumor
0.5
277
Tumor
0.5
636
Normal
0.5
724
Normal
0.5
921
Tumor
0.5
951
Tumor
0.5
672
Normal
0.5
367
Tumor
0.5
737
Tumor
0.5
671
Tumor
0.5
267
Tumor
0.5
567
Tumor
0.5
232
Normal
0.4
487
Tumor
0.4
415
Tumor
0.4
975
Tumor
0.4
258
Normal
0.4
217
Tumor
0.4
877
Tumor
0.4
268
Normal
0.4
618
Normal
0.4
227
Tumor
0.4
461
Tumor
0.4
195
Tumor
0.4
427
Tumor
0.4
571
Tumor
0.4
642
Normal
0.4
488
Normal
0.4
881
Tumor
0.4
328
Normal
0.4
221
Tumor
0.4
141
Tumor
0.4
211
Tumor
0.4
191
Tumor
0.4
685
Tumor
0.4
451
Tumor
0.4
628
Normal
0.4
937
Tumor
0.4
635
Tumor
0.4
413
Tumor
0.4
813
Tumor
0.3
545
Tumor
0.3
222
Normal
0.3
456
Normal
0.3
963
Tumor
0.3
665
Tumor
0.3
483
Tumor
0.3
112
Tumor
0.3
135
Tumor
0.3
537
Tumor
0.3
262
Normal
0.3
357
Tumor
0.3
468
Normal
0.3
493
Tumor
0.3
192
Normal
0.3
443
Tumor
0.3
431
Tumor
0.3
331
Tumor
0.3
616
Normal
0.3
573
Tumor
0.3
666
Normal
0.3
231
Tumor
0.3
435
Tumor
0.3
883
Tumor
0.3
297
Tumor
0.3
272
Normal
0.3
127
Tumor
0.3
313
Tumor
0.3
661
Tumor
0.3
271
Tumor
0.3
713
Tumor
0.3
917
Tumor
0.3
742
Normal
0.3
662
Normal
0.2
785
Tumor
0.2
464
Normal
0.2
213
Tumor
0.2
615
Tumor
0.2
428
Normal
0.2
491
Tumor
0.2
471
Tumor
0.2
455
Tumor
0.2
161
Tumor
0.2
913
Tumor
0.2
113
Tumor
0.2
466
Normal
0.2
477
Tumor
0.2
1015
Tumor
0.2
433
Tumor
0.2
196
Normal
0.2
257
Tumor
0.2
186
Normal
0.2
492
Normal
0.2
494
Normal
0.2
218
Normal
0.2
648
Normal
0.2
627
Tumor
0.2
162
Normal
0.1
534
Normal
0.1
172
Normal
0.1
423
Tumor
0.1
814
Normal
0.1
148
Normal
0.1
815
Tumor
0.1
728
Normal
0.1
424
Normal
0.1
817
Tumor
0.1
224
Normal
0.1
911
Tumor
0.1
925
Tumor
0.1
452
Normal
0.1
363
Tumor
0.1
981
Tumor
0.1
663
Tumor
0.1
546
Normal
0.1
214
Normal
0.1
851
Tumor
0.1
563
Tumor
0.1
212
Normal
0.1
365
Tumor
0.1
554
Normal
0.1
188
Normal
0.1
818
Normal
0.1
738
Normal
0.1
361
Tumor
0.1
553
Tumor
0.1
171
Tumor
0.1
434
Normal
0.1
617
Tumor
0.1
528
Normal
0.0
426
Normal
0.0
915
Tumor
0.0
311
Tumor
0.0
147
Tumor
0.0
498
Normal
0.0
228
Normal
0.0
146
Normal
0.0
286
Normal
0.0
445
Tumor
0.0
185
Tumor
0.0
298
Normal
0.0
344
Normal
0.0
884
Normal
0.0
187
Tumor
0.0
745
Tumor
0.0
664
Normal
0.0
284
Normal
0.0
436
Normal
0.0
375
Tumor
0.0
912
Normal
0.0
955
Tumor
0.0
353
Tumor
0.0
142
Normal
0.0
755
Tumor
0.0
352
Normal
0.0
882
Normal
-0.1
557
Tumor
-0.1
314
Normal
-0.1
383
Tumor
-0.1
354
Normal
-0.1
446
Normal
-0.1
278
Normal
-0.1
484
Normal
-0.1
572
Normal
-0.1
137
Tumor
-0.1
527
Tumor
-0.1
878
Normal
-0.1
714
Normal
-0.1
944
Normal
-0.1
954
Normal
-0.1
312
Normal
-0.1
916
Normal
-0.1
914
Normal
-0.1
223
Tumor
-0.1
824
Normal
-0.1
481
Tumor
-0.1
721
Tumor
-0.1
568
Normal
-0.1
574
Normal
-0.1
332
Normal
-0.2
444
Normal
-0.2
686
Normal
-0.2
538
Normal
-0.2
261
Tumor
-0.2
358
Normal
-0.2
414
Normal
-0.2
723
Tumor
-0.2
126
Normal
-0.2
515
Tumor
-0.2
526
Normal
-0.2
412
Normal
-0.2
956
Normal
-0.2
938
Normal
-0.2
342
Normal
-0.2
558
Normal
-0.2
327
Tumor
-0.2
518
Normal
-0.2
422
Normal
-0.2
516
Normal
-0.2
924
Normal
-0.2
564
Normal
-0.2
478
Normal
-0.2
696
Normal
-0.2
513
Tumor
-0.2
421
Tumor
-0.2
966
Normal
-0.3
523
Tumor
-0.3
857
Tumor
-0.3
124
Normal
-0.3
432
Normal
-0.3
517
Tumor
-0.3
138
Normal
-0.3
364
Normal
-0.3
918
Normal
-0.3
952
Normal
-0.3
858
Normal
-0.3
114
Normal
-0.3
922
Normal
-0.3
145
Tumor
-0.3
976
Normal
-0.4
926
Normal
-0.4
366
Normal
-0.4
823
Tumor
-0.4
482
Normal
-0.4
514
Normal
-0.4
964
Normal
-0.4
716
Normal
-0.4
978
Normal
-0.4
368
Normal
-0.4
472
Normal
-0.4
968
Normal
-0.4
756
Normal
-0.4
984
Normal
-0.4
356
Normal
-0.4
525
Tumor
-0.5
111
Normal
-0.5
376
Normal
-0.5
778
Normal
-0.5
722
Normal
-0.5
816
Normal
-0.5
1014
Normal
-0.5
786
Normal
-0.5
958
Normal
-0.5
852
Normal
-0.5
744
Normal
-0.5
416
Normal
-0.5
647
Tumor
-0.5
474
Normal
-0.5
132
Normal
-0.6
128
Normal
-0.6
982
Normal
-0.6
1016
Normal
-0.6
384
Normal
-0.6
136
Normal
-0.7
362
Normal
-0.7
462
Normal
-0.7
746
Normal
-0.7
524
Normal
-0.7
385
Tumor
N/A
386
Normal
N/A
387
Tumor
N/A
388
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
392
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
861
Tumor
N/A
862
Normal
N/A
863
Tumor
N/A
1046
Normal
N/A
864
Normal
N/A
1045
Tumor
N/A
865
Tumor
N/A
866
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
535
Tumor
N/A
536
Normal
N/A
447
Tumor
N/A
448
Normal
N/A
697
Tumor
N/A
698
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
