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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ST6GALNAC6 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
70.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
70.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
66.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
61.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
53.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
50.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
47.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
44.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
44.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
43.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
41.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
41.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
40.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
39.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
38.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
37.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
37.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
37.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
36.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
36.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
35.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
35.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
33.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
33.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
32.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
31.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
30.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
30.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
29.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
28.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
27.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
26.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
26.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
26.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
25.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
25.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
24.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
24.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
24.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
23.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
23.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
23.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
22.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
22.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
22.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
21.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
21.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
20.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
20.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
20.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
18.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
17.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
14.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
14.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
13.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
13.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
12.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
12.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
12.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
11.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
8.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ST6GALNAC6 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
105.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
88.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
85.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
73.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
72.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
67.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
64.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
60.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
60.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
58.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
58.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
58.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
57.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
57.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
56.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
55.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
55.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
54.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
52.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
52.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
51.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
51.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
50.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
50.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
50.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
50.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
49.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
49.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
49.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
49.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
49.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
48.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
48.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
47.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
47.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
46.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
46.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
46.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
46.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
45.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
45.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
45.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
45.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
44.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
44.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
44.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
44.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
44.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
44.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
43.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
43.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
43.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
43.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
43.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
42.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
42.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
42.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
42.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
42.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
42.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
42.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
41.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
41.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
41.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
41.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
41.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
41.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
41.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
41.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
41.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
40.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
40.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
40.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
40.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
40.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
40.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
40.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
39.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
39.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
39.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
39.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
39.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
39.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
39.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
39.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
39.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
39.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
39.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
38.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
38.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
38.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
38.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
38.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
38.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
38.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
38.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
37.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
37.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
37.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
37.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
37.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
37.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
37.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
37.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
37.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
37.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
36.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
36.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
36.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
36.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
36.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
36.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
36.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
36.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
36.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
36.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
36.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
36.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
36.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
36.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
36.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
35.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
35.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
35.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
35.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
35.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
35.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
35.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
35.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
35.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
35.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
35.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
35.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
35.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
35.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
35.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
35.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
35.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
35.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
35.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
35.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
34.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
34.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
34.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
34.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
34.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
34.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
34.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
34.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
34.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
34.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
34.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
34.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
34.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
34.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
34.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
33.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
33.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
33.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
33.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
33.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
33.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
33.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
33.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
33.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
33.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
33.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
33.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
33.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
33.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
33.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
33.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
33.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
33.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
33.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
33.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
33.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
32.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
32.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
32.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
32.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
32.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
32.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
32.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
32.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
31.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
31.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
31.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
31.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
31.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
31.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
31.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
31.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
31.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
31.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
31.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
31.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
31.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
31.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
31.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
31.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
31.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
30.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
30.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
30.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
30.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
30.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
30.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
30.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
30.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
30.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
30.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
30.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
30.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
30.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
30.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
30.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
30.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
30.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
30.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
30.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
29.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
29.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
29.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
29.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
29.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
29.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
29.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
29.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
29.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
29.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
29.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
29.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
29.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
29.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
29.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
29.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
29.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
29.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
29.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
29.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
29.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
29.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
29.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
29.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
29.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
29.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
29.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
29.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
28.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
28.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
28.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
28.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
28.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
28.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
28.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
28.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
28.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
28.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
28.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
28.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
28.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
28.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
28.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
28.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
28.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
28.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
28.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
27.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
27.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
27.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
27.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
27.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
27.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
27.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
27.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
27.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
27.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
27.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
27.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
27.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
27.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
27.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
27.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
27.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
26.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
26.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
26.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
26.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
26.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
26.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
26.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
26.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
26.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
26.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
26.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
26.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
26.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
26.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
26.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
26.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
26.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
26.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
26.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
26.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
26.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
25.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
25.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
25.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
25.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
25.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
25.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
25.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
25.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
25.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
25.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
25.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
25.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
25.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
25.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
25.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
25.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
25.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
25.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
25.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
25.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
25.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
24.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
24.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
24.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
24.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
24.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
24.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
24.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
24.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
24.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
24.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
24.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
24.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
24.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
24.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
24.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
24.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
24.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
24.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
24.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
24.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
24.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
23.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
23.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
23.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
23.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
23.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
23.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
23.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
23.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
23.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
23.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
23.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
23.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
23.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
23.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
23.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
23.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
23.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
23.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
22.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
22.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
22.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
22.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
22.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
22.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
22.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
22.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
22.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
22.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
22.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
22.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
22.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
22.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
22.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
22.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
22.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
22.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
21.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
21.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
21.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
21.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
21.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
21.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
21.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
21.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
21.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
21.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
21.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
21.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
21.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
21.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
21.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
21.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
21.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
20.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
20.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
20.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
20.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
20.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
20.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
20.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
20.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
20.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
20.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
20.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
20.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
20.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
20.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
20.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
20.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
19.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
19.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
19.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
19.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
19.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
19.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
19.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
19.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
19.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
19.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
19.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
19.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
19.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
19.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
19.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
19.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
19.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
18.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
18.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
18.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
18.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
18.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
18.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
18.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
18.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
18.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
18.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
18.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
18.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
18.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
17.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
17.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
17.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
17.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
17.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
17.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
17.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
16.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
16.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
16.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
16.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
16.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
16.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
16.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
16.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
16.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
15.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
15.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
15.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
15.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
15.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
15.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
15.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
15.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
15.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
15.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
15.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
15.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
15.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
15.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
15.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
15.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
14.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
14.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
14.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
14.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
14.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
14.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
14.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
13.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
13.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
13.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
13.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
13.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
13.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
13.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
13.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
12.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
12.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
12.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
12.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
12.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
9.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
9.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
8.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
8.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
7.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ST6GALNAC6 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
49.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
48.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
47.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
46.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
43.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
41.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
40.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
36.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
36.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
36.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
35.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
35.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
34.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
34.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
34.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
33.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
33.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
33.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
32.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
32.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
32.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
31.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
31.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
31.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
31.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
30.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
29.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
29.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
29.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
29.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
28.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
28.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
28.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
28.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
28.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
28.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
28.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
28.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
27.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
27.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
27.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
26.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
26.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
26.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
26.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
26.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
26.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
26.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
25.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
25.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
25.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
25.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
25.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
24.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
23.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
23.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
23.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
23.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
23.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
23.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
22.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
22.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
22.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
22.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
21.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
21.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
20.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
19.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
18.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
17.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
17.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
17.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
17.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
16.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
16.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
16.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
16.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
15.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
15.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
15.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
14.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
14.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
14.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
14.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
13.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
13.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
12.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
12.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
11.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
11.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
10.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ST6GALNAC6 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
104.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
85.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
82.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
73.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
73.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
73.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
70.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
69.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
67.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
67.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
67.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
66.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
65.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
65.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
63.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
60.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
58.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
58.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
56.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
55.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
55.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
54.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
53.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
51.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
50.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
49.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
49.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
49.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
49.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
48.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
48.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
48.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
48.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
47.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
47.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
47.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
47.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
46.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
46.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
46.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
45.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
45.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
44.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
44.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
43.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
43.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
43.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
43.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
42.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
42.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
41.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
40.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
39.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
39.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
39.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
39.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
38.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
38.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
38.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
38.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
38.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
38.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
38.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
37.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
36.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
36.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
36.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
36.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
36.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
36.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
34.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
33.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
33.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
33.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
33.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
32.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
32.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
32.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
31.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
31.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
31.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
31.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
31.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
31.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
31.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
31.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
30.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
30.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
30.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
30.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
30.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
30.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
30.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
30.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
30.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
29.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
29.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
29.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
29.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
29.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
29.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
29.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
29.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
29.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
28.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
28.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
28.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
28.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
27.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
27.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
27.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
27.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
27.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
27.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
27.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
27.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
26.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
26.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
26.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
26.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
26.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
25.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
25.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
25.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
25.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
25.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
25.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
24.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
24.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
24.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
24.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
24.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
24.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
24.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
24.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
23.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
23.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
23.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
23.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
23.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
23.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
23.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
23.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
23.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
23.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
22.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
22.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
22.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
22.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
22.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
22.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
22.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
22.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
22.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
21.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
21.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
21.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
21.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
21.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
21.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
21.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
21.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
21.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
21.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
20.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
20.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
20.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
19.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
19.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
19.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
19.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
19.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
19.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
19.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
19.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
19.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
19.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
18.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
18.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
18.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
18.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
18.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
18.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
18.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
18.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
18.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
18.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
17.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
17.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
17.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
17.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
16.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
16.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
16.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
16.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
16.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
16.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
16.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
16.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
16.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
16.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
16.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
15.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
15.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
15.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
15.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
15.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
14.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
14.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
14.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
14.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
14.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
14.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
14.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
13.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
13.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
13.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
13.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
13.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
13.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
13.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
12.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
12.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
12.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
12.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
12.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
12.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
11.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
11.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
11.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
11.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
10.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
10.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
9.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
9.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
9.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
9.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
9.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
8.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
8.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
8.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
8.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
7.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
7.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
7.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
7.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
6.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
4.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
4.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
3.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
3.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
2.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
