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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
U2AF1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
85.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
81.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
79.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
72.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
70.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
48.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
48.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
46.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
46.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
44.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
41.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
41.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
36.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
33.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
28.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
28.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
28.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
26.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
26.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
25.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
23.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
20.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
19.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
19.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
18.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
15.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
15.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
13.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
13.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
11.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
10.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
9.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
7.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
6.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
2.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
2.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
1.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
U2AF1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
136.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
125.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
123.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
118.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
116.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
109.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
105.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
105.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
105.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
102.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
101.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
100.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
96.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
96.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
94.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
94.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
94.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
93.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
93.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
93.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
91.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
90.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
89.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
87.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
86.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
84.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
84.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
82.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
82.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
82.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
81.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
80.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
79.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
79.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
79.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
78.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
78.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
77.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
77.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
76.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
76.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
75.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
75.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
74.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
74.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
73.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
73.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
73.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
73.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
73.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
72.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
72.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
72.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
71.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
71.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
70.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
70.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
70.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
69.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
69.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
69.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
68.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
68.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
68.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
67.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
67.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
67.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
66.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
66.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
66.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
66.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
66.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
66.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
66.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
66.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
66.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
65.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
65.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
64.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
64.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
64.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
64.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
63.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
63.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
63.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
63.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
63.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
63.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
63.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
63.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
63.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
62.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
62.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
62.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
61.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
61.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
61.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
61.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
60.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
60.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
60.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
60.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
59.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
59.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
59.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
59.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
59.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
58.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
58.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
58.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
58.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
57.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
57.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
57.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
56.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
56.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
56.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
55.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
55.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
55.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
55.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
55.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
54.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
54.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
54.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
54.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
54.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
53.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
53.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
53.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
53.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
53.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
53.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
53.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
53.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
53.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
53.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
53.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
52.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
52.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
52.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
52.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
52.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
51.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
51.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
51.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
51.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
51.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
50.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
50.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
50.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
50.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
49.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
49.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
49.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
49.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
49.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
49.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
49.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
49.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
48.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
48.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
48.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
48.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
48.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
47.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
47.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
47.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
47.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
47.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
47.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
46.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
46.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
46.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
46.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
46.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
46.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
46.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
46.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
45.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
45.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
45.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
45.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
45.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
45.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
45.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
45.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
45.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
45.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
45.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
44.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
44.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
43.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
43.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
43.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
43.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
43.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
43.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
43.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
43.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
42.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
42.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
42.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
42.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
42.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
42.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
42.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
42.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
42.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
42.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
42.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
42.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
41.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
41.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
41.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
41.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
41.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
41.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
41.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
40.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
40.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
40.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
40.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
39.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
39.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
39.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
39.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
39.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
39.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
39.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
39.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
39.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
39.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
38.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
38.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
38.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
38.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
38.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
38.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
37.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
37.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
37.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
37.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
37.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
37.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
37.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
37.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
37.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
37.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
37.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
36.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
36.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
36.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
36.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
36.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
36.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
36.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
35.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
35.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
35.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
35.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
35.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
35.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
35.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
35.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
35.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
35.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
35.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
35.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
35.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
35.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
34.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
34.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
34.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
34.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
34.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
34.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
34.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
34.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
33.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
33.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
33.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
33.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
33.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
33.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
33.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
33.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
33.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
33.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
33.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
33.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
33.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
33.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
32.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
32.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
32.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
32.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
32.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
32.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
32.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
32.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
32.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
32.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
32.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
32.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
31.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
31.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
31.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
31.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
31.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
31.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
31.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
31.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
31.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
30.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
30.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
30.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
30.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
30.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
30.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
30.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
30.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
30.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
30.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
29.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
29.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
29.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
29.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
29.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
28.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
28.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
28.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
28.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
28.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
27.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
27.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
27.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
27.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
27.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
27.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
26.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
26.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
26.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
26.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
26.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
26.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
26.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
26.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
26.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
26.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
26.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
25.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
25.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
25.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
25.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
25.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
25.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
25.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
25.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
25.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
24.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
24.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
24.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
24.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
24.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
24.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
23.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
23.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
23.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
23.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
23.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
23.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
23.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
23.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
22.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
22.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
22.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
22.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
22.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
22.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
21.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
21.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
21.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
20.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
19.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
19.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
19.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
19.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
19.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
19.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
18.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
18.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
18.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
18.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
18.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
18.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
18.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
18.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
18.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
17.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
17.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
17.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
17.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
17.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
17.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
17.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
16.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
16.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
16.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
15.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
15.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
14.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
14.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
14.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
14.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
14.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
14.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
13.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
13.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
12.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
12.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
11.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
11.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
11.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
10.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
10.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
10.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
10.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
9.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
9.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
9.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
8.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
8.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
8.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
7.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
7.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
7.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
7.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
6.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
6.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
6.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
6.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
6.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
5.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
4.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
4.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
4.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
4.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
4.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
3.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
3.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
3.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
3.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
3.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
3.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
3.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
3.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
3.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
2.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
2.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
2.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
2.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
2.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
2.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
2.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
2.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
2.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
1.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
1.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
1.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
1.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
1.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
1.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
1.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
1.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
1.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
1.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
1.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
1.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
0.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
0.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
0.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
0.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
0.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
0.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
0.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
0.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
0.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
0.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
0.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
0.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
0.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
0.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
0.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
0.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
0.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
0.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
0.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
U2AF1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
175.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
151.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
112.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
111.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
108.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
100.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
95.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
94.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
93.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
89.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
83.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
83.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
80.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
80.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
79.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
78.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
76.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
76.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
76.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
75.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
75.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
75.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
74.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
73.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
73.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
73.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
72.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
71.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
71.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
70.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
70.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
70.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
69.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
69.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
69.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
68.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
67.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
64.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
64.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
64.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
63.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
62.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
62.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
61.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
60.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
60.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
59.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
57.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
57.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
56.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
56.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
55.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
54.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
54.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
54.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
52.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
52.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
52.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
52.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
51.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
50.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
49.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
48.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
48.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
48.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
48.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
46.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
45.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
45.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
45.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
45.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
44.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
42.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
41.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
40.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
40.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
38.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
37.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
36.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
35.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
34.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
33.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
32.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
31.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
30.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
25.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
25.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
25.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
24.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
21.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
21.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
21.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
18.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
11.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
11.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
8.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
U2AF1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
124.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
115.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
106.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
104.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
103.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
100.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
98.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
96.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
94.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
93.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
93.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
92.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
91.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
90.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
90.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
89.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
89.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
85.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
82.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
82.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
82.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
81.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
81.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
80.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
79.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
79.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
77.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
77.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
77.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
77.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
77.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
76.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
76.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
73.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
73.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
72.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
72.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
70.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
69.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
68.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
67.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
67.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
66.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
65.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
64.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
64.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
64.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
63.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
63.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
61.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
61.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
60.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
60.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
60.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
60.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
59.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
59.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
59.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
58.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
58.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
58.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
58.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
58.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
57.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
57.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
56.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
55.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
55.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
54.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
54.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
54.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
54.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
53.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
52.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
51.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
51.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
50.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
49.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
48.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
48.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
48.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
47.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
47.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
46.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
46.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
45.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
44.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
44.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
43.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
43.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
42.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
42.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
41.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
40.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
40.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
40.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
39.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
39.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
39.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
37.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
37.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
36.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
36.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
36.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
36.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
36.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
36.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
35.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
35.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
34.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
34.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
34.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
34.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
34.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
33.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
33.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
33.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
32.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
31.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
31.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
30.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
30.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
29.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
29.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
29.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
29.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
28.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
28.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
28.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
27.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
27.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
26.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
26.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
25.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
24.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
24.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
23.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
23.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
23.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
22.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
22.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
22.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
22.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
22.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
21.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
21.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
21.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
21.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
20.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
19.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
19.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
19.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
18.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
18.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
18.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
17.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
17.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
16.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
15.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
14.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
13.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
10.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
10.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
8.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
8.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
8.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
8.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
7.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
7.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
5.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
5.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
5.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
5.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
4.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
3.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
3.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
3.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
3.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
3.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
3.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
2.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
2.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
2.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
2.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
2.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
2.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
2.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
2.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
1.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
1.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
1.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
1.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
1.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
1.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
1.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
0.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
0.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
0.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
0.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
0.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
0.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
0.7
CPT0012180003
Tumor
0.6
CPT0001180009
Tumor
0.6
CPT0077320001
Normal
0.5
CPT0001540009
Tumor
0.5
CPT0071150004
Tumor
0.5
CPT0075720003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0012640003
Normal
0.4
CPT0006440003
Tumor
0.4
CPT0084590001
Normal
0.4
CPT0017410003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0088970003
Tumor
0.4
CPT0088550004
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0012920003
Normal
0.3
CPT0075130003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0086950003
Tumor
0.3
CPT0079510001
Normal
0.3
CPT0065430003
Tumor
0.3
CPT0075170001
Normal
0.3
CPT0010110003
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0017850003
Tumor
0.3
CPT0086820003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0084560003
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0012080003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0023350003
Tumor
0.2
CPT0000660001
Normal
0.2
CPT0002370001
Normal
0.2
CPT0065820001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0007470001
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0078670001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0078660003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0079180003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0001230001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0000780007
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0063330001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0088640003
Normal
0.0
CPT0089480003
Normal
0.0
CPT0011410003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0025920001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0001550001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0076350001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0079270003
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0092290003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0012280003
Tumor
-0.2
CPT0092730003
Tumor
-0.2
CPT0002350011
Tumor
-0.2
CPT0065750003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0023710001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0002270011
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0078800003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0081880003
Tumor
-0.3
CPT0086360003
Tumor
-0.3
CPT0025170003
Tumor
-0.3
CPT0026420001
Normal
-0.3
CPT0076330003
Tumor
-0.3
CPT0007860003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0089460004
Tumor
-0.3
CPT0078930003
Tumor
-0.3
CPT0078510003
Tumor
-0.3
CPT0065810003
Tumor
-0.4
CPT0065930003
Tumor
-0.4
CPT0023690003
Tumor
-0.4
CPT0066470004
Tumor
-0.5
CPT0006630003
Tumor
-0.5
CPT0077310003
Tumor
-0.5
CPT0001500009
Tumor
-0.5
CPT0064370003
Tumor
-0.6
CPT0019990003
Tumor
-0.6
CPT0020120003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
