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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMB4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
165.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
442.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
376.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
353.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
262.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
220.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
206.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
200.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
199.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
193.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
193.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
190.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
190.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
188.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
186.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
179.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
178.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
178.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
177.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
177.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
176.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
175.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
174.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
173.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
169.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
169.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
165.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
164.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
163.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
163.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
162.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
162.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
160.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
160.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
159.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
159.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
156.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
156.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
155.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
154.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
153.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
147.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
147.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
146.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
145.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
141.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
139.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
136.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
134.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
134.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
126.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
123.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
123.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
120.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
118.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
116.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
116.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
114.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
114.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
109.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
106.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
106.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
99.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
90.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMB4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
246.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
616.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
565.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
530.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
496.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
491.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
459.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
439.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
427.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
408.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
395.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
394.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
391.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
390.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
384.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
382.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
381.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
378.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
377.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
373.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
372.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
367.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
364.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
363.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
361.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
360.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
353.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
353.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
352.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
351.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
350.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
349.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
345.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
343.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
343.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
342.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
341.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
339.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
339.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
336.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
336.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
335.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
333.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
332.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
331.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
331.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
330.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
330.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
330.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
330.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
329.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
329.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
326.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
324.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
324.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
323.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
320.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
319.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
318.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
317.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
316.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
316.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
316.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
315.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
314.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
313.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
313.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
312.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
312.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
311.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
311.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
310.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
310.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
310.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
309.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
308.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
307.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
307.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
306.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
305.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
305.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
304.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
302.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
298.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
298.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
298.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
298.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
297.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
297.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
296.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
295.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
295.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
295.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
294.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
293.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
293.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
293.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
293.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
293.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
292.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
292.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
292.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
291.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
291.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
291.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
291.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
290.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
290.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
289.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
289.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
288.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
288.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
287.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
287.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
287.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
286.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
286.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
286.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
285.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
284.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
284.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
284.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
284.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
283.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
282.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
282.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
282.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
281.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
281.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
281.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
281.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
281.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
281.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
279.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
279.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
279.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
279.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
279.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
278.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
278.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
277.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
277.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
277.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
276.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
276.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
276.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
276.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
276.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
275.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
274.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
273.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
272.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
272.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
272.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
271.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
271.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
270.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
270.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
269.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
269.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
269.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
269.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
268.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
268.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
267.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
267.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
266.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
265.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
265.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
265.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
264.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
264.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
264.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
264.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
263.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
263.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
263.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
263.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
263.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
262.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
262.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
262.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
262.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
262.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
262.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
262.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
262.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
262.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
262.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
261.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
261.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
261.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
261.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
260.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
260.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
259.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
259.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
259.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
259.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
258.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
258.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
258.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
257.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
257.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
257.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
257.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
257.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
256.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
256.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
256.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
255.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
255.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
255.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
255.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
255.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
255.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
254.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
254.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
254.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
254.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
253.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
253.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
253.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
252.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
252.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
252.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
252.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
252.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
251.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
251.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
251.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
251.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
249.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
249.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
249.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
248.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
248.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
248.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
248.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
248.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
248.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
246.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
246.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
246.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
246.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
246.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
245.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
244.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
244.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
244.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
244.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
244.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
243.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
243.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
243.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
242.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
242.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
241.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
241.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
241.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
241.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
241.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
240.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
240.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
240.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
239.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
239.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
239.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
238.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
238.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
238.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
238.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
237.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
237.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
237.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
237.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
237.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
237.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
236.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
236.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
236.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
236.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
235.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
235.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
235.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
235.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
235.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
234.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
234.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
234.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
233.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
233.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
233.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
232.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
232.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
231.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
230.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
230.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
230.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
230.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
230.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
230.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
229.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
229.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
228.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
228.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
228.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
228.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
227.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
227.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
226.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
225.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
225.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
225.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
224.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
224.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
223.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
223.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
223.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
223.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
223.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
222.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
222.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
222.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
221.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
221.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
221.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
221.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
221.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
220.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
220.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
220.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
219.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
219.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
219.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
219.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
218.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
218.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
218.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
218.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
217.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
217.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
217.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
217.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
217.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
216.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
216.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
216.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
216.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
216.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
215.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
215.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
215.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
214.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
214.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
214.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
214.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
214.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
213.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
213.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
213.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
212.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
212.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
212.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
212.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
212.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
211.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
211.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
211.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
210.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
210.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
210.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
210.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
210.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
210.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
209.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
209.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
209.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
209.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
208.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
208.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
207.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
207.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
207.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
207.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
206.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
205.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
205.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
205.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
204.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
204.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
204.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
204.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
204.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
203.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
203.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
202.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
201.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
201.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
200.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
200.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
200.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
200.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
199.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
198.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
198.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
198.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
198.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
198.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
197.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
197.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
197.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
197.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
196.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
196.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
196.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
196.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
195.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
195.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
195.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
194.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
194.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
193.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
193.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
193.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
193.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
193.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
193.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
193.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
192.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
192.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
192.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
191.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
191.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
191.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
191.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
191.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
191.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
191.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
190.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
190.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
189.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
189.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
189.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
188.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
188.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
188.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
188.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
188.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
187.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
187.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
186.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
185.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
185.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
185.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
185.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
184.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
184.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
184.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
183.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
182.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
179.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
179.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
177.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
177.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
177.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
176.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
176.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
175.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
172.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
172.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
169.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
168.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
168.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
167.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
167.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
167.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
167.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
166.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
166.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
164.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
164.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
164.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
163.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
163.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
163.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
163.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
161.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
160.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
160.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
160.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
158.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
154.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
153.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
152.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
152.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
152.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
151.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
147.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
147.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
146.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
145.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
144.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
143.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
143.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
140.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
131.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
130.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
126.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
125.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
123.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
118.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
118.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
118.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
117.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
116.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
98.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
88.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
82.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
80.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
74.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMB4 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
214.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
421.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
396.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
376.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
371.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
336.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
323.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
320.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
296.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
288.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
275.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
266.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
265.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
265.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
263.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
261.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
260.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
258.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
256.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
252.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
252.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
251.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
247.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
245.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
243.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
242.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
242.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
233.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
230.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
230.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
225.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
223.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
220.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
219.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
219.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
218.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
217.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
217.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
215.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
214.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
213.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
212.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
211.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
209.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
208.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
208.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
206.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
204.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
204.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
202.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
202.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
201.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
200.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
199.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
199.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
198.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
198.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
196.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
192.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
192.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
191.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
191.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
190.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
190.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
190.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
190.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
188.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
186.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
186.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
186.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
185.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
185.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
185.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
183.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
182.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
181.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
181.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
180.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
179.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
178.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
175.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
175.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
174.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
174.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
174.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
172.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
171.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
169.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
167.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
164.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
163.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
162.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
160.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
159.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
159.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
154.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
150.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
149.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
146.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
120.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMB4 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
238.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
557.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
489.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
485.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
452.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
435.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
421.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
405.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
401.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
401.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
395.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
390.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
389.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
382.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
371.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
364.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
364.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
358.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
356.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
356.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
353.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
350.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
350.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
347.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
344.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
339.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
326.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
325.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
319.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
317.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
317.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
316.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
315.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
315.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
314.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
313.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
312.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
310.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
310.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
310.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
309.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
309.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
306.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
305.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
303.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
301.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
301.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
300.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
298.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
297.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
294.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
293.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
293.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
293.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
293.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
291.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
291.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
291.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
288.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
288.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
287.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
284.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
284.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
283.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
281.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
278.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
278.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
276.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
276.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
275.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
274.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
273.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
273.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
273.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
272.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
271.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
270.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
269.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
268.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
268.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
266.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
264.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
264.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
264.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
263.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
263.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
263.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
262.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
262.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
261.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
261.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
259.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
259.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
259.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
259.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
258.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
257.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
257.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
256.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
256.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
255.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
255.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
254.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
254.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
254.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
252.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
252.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
252.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
251.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
251.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
251.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
251.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
249.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
249.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
248.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
248.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
247.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
247.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
246.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
246.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
245.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
244.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
244.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
244.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
243.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
242.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
241.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
241.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
239.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
238.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
238.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
237.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
237.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
236.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
235.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
235.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
235.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
235.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
235.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
235.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
234.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
234.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
234.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
233.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
233.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
232.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
232.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
231.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
231.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
231.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
231.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
229.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
228.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
227.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
227.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
227.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
226.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
225.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
225.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
225.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
224.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
224.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
224.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
224.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
224.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
222.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
220.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
220.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
220.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
219.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
219.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
219.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
219.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
219.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
219.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
217.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
216.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
216.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
215.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
215.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
214.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
212.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
211.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
211.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
211.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
211.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
211.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
210.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
210.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
208.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
208.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
208.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
208.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
206.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
206.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
204.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
203.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
203.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
202.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
201.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
200.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
199.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
198.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
197.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
197.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
196.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
195.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
195.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
194.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
194.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
192.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
191.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
191.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
190.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
189.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
189.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
188.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
188.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
188.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
187.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
187.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
187.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
186.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
186.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
186.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
185.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
185.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
185.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
184.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
184.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
183.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
183.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
182.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
180.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
179.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
178.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
177.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
176.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
175.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
175.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
174.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
173.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
172.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
172.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
170.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
170.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
168.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
167.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
167.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
165.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
162.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
162.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
159.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
156.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
154.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
154.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
153.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
152.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
151.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
148.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
147.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
144.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
143.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
142.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
141.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
140.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
131.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
129.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
129.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
128.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
123.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
122.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
114.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
112.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
111.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
109.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
106.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
96.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
94.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
87.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
71.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
71.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
30.7
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0086030003
Tumor
0.7
CPT0092290003
Tumor
0.6
CPT0021240003
Tumor
0.6
CPT0065930003
Tumor
0.6
CPT0069000003
Tumor
0.6
CPT0025290003
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0078930003
Tumor
0.5
CPT0078510003
Tumor
0.5
CPT0023690003
Tumor
0.5
CPT0025110003
Tumor
0.5
CPT0015730003
Tumor
0.5
CPT0007860003
Tumor
0.5
CPT0006630003
Tumor
0.5
CPT0064370003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0019990003
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0065810003
Tumor
0.5
CPT0065690003
Tumor
0.5
CPT0006900003
Tumor
0.5
CPT0077310003
Tumor
0.4
CPT0024670003
Tumor
0.4
CPT0075560003
Tumor
0.4
CPT0088970003
Tumor
0.4
CPT0077490003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0089460004
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0066470004
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0015910003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0078990003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0086360003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0023350003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0001340003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0078670001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0006950001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0088550004
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0025920001
Normal
-0.1
CPT0012670003
Tumor
-0.1
CPT0078660003
Tumor
-0.1
CPT0025610001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0012370003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0086820003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0001180009
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0013790003
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0007320003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0092160003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0088630003
Tumor
-0.2
CPT0023360001
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0065820001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0092190003
Normal
-0.3
CPT0006530001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0086830003
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0077320001
Normal
-0.3
CPT0085670003
Tumor
-0.3
CPT0001270001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0078800003
Tumor
-0.3
CPT0078530001
Normal
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
