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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNF8 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
91.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
71.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
67.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
66.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
53.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
51.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
49.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
46.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
46.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
45.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
43.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
36.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
36.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
35.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
34.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
32.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
31.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
31.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
31.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
29.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
28.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
27.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
27.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
27.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
27.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
26.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
26.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
25.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
25.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
25.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
25.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
24.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
24.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
24.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
23.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
23.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
22.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
22.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
22.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
21.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
21.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
20.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
19.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
18.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
18.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
17.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
17.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
17.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
17.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
16.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
15.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
14.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
14.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
9.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
6.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
4.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
3.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
3.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNF8 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
145.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
145.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
78.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
77.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
77.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
69.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
69.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
68.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
68.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
67.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
66.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
66.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
66.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
66.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
65.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
65.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
64.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
62.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
61.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
59.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
59.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
59.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
58.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
57.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
57.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
57.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
56.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
56.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
56.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
56.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
56.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
55.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
55.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
55.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
55.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
55.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
54.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
54.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
54.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
54.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
54.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
53.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
53.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
53.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
53.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
53.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
53.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
53.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
53.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
53.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
53.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
52.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
52.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
52.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
52.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
51.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
51.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
51.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
51.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
51.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
51.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
51.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
50.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
50.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
50.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
50.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
50.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
50.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
50.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
50.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
50.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
50.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
50.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
50.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
50.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
50.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
49.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
49.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
49.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
49.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
49.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
49.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
49.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
49.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
49.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
49.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
49.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
49.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
49.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
48.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
48.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
48.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
48.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
48.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
48.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
48.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
48.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
48.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
48.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
48.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
48.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
48.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
48.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
48.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
48.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
48.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
47.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
47.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
47.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
47.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
47.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
47.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
47.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
47.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
47.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
47.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
47.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
46.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
46.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
46.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
46.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
46.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
46.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
46.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
46.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
46.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
46.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
46.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
46.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
46.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
46.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
46.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
45.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
45.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
45.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
45.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
45.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
45.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
45.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
45.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
45.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
45.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
45.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
45.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
45.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
45.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
45.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
45.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
45.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
45.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
45.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
45.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
45.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
44.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
44.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
44.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
44.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
44.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
44.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
44.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
44.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
44.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
44.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
44.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
44.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
44.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
44.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
44.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
44.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
44.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
44.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
44.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
44.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
43.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
43.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
43.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
43.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
43.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
43.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
43.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
43.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
43.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
43.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
43.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
43.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
43.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
43.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
43.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
43.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
43.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
42.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
42.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
42.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
42.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
42.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
42.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
42.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
42.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
42.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
42.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
42.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
42.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
42.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
42.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
41.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
41.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
41.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
41.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
41.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
41.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
41.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
41.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
41.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
41.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
41.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
41.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
41.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
41.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
41.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
41.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
41.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
41.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
41.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
41.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
41.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
41.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
41.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
41.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
41.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
41.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
41.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
40.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
40.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
40.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
40.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
40.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
40.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
40.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
40.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
40.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
40.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
40.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
40.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
40.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
40.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
40.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
40.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
40.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
40.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
40.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
40.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
39.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
39.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
39.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
39.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
39.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
39.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
39.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
39.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
39.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
39.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
39.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
39.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
39.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
39.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
39.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
39.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
39.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
39.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
39.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
39.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
39.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
38.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
38.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
38.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
38.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
38.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
38.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
38.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
38.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
38.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
38.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
38.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
38.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
37.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
37.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
37.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
37.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
37.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
37.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
37.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
37.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
37.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
37.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
37.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
37.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
37.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
37.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
37.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
37.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
37.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
37.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
37.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
36.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
36.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
36.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
36.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
36.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
36.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
36.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
36.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
36.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
36.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
36.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
36.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
35.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
35.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
35.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
35.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
35.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
35.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
35.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
35.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
35.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
35.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
35.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
35.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
35.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
35.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
35.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
35.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
35.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
35.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
35.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
35.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
34.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
34.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
34.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
34.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
34.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
34.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
34.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
34.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
34.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
34.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
34.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
34.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
34.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
34.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
34.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
34.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
34.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
34.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
33.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
33.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
33.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
33.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
33.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
33.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
33.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
33.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
33.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
33.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
33.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
33.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
32.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
32.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
32.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
32.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
32.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
32.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
32.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
32.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
32.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
32.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
32.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
32.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
32.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
32.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
32.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
32.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
32.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
32.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
32.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
32.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
32.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
32.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
31.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
31.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
31.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
31.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
31.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
31.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
31.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
31.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
31.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
31.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
31.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
31.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
31.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
30.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
30.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
30.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
30.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
30.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
30.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
30.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
30.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
30.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
30.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
29.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
29.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
29.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
29.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
29.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
29.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
29.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
29.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
29.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
29.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
29.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
29.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
28.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
28.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
28.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
28.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
28.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
28.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
28.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
27.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
27.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
27.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
27.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
27.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
27.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
27.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
27.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
27.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
27.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
27.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
27.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
27.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
26.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
26.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
26.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
26.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
26.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
26.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
25.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
25.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
25.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
25.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
25.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
25.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
25.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
24.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
24.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
24.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
24.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
24.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
24.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
23.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
23.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
23.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
23.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
23.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
23.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
23.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
23.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
23.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
22.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
22.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
22.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
21.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
21.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
21.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
21.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
21.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
21.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
21.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
21.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
20.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
20.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
20.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
20.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
20.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
20.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
19.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
19.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
19.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
19.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
18.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
18.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
18.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
17.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
17.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
16.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
16.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
15.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
15.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
15.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
15.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
15.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
15.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
12.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
12.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
11.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
11.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
11.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
11.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
10.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
8.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
7.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNF8 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
68.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
56.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
54.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
49.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
46.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
46.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
46.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
45.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
44.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
43.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
42.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
40.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
39.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
39.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
39.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
39.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
39.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
39.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
38.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
38.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
38.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
37.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
37.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
37.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
36.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
36.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
36.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
36.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
36.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
36.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
36.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
36.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
36.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
35.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
35.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
35.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
35.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
35.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
34.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
34.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
34.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
34.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
34.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
33.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
33.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
33.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
33.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
32.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
32.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
31.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
31.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
31.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
31.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
31.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
31.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
30.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
30.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
30.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
30.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
30.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
30.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
30.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
30.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
29.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
29.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
29.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
29.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
29.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
29.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
28.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
28.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
28.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
28.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
28.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
28.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
27.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
27.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
27.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
27.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
27.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
26.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
26.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
26.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
26.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
26.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
25.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
25.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
24.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
24.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
23.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
23.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
22.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
22.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
21.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
21.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
21.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNF8 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
208.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
170.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
156.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
147.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
132.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
129.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
128.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
127.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
120.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
119.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
116.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
116.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
109.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
105.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
103.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
103.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
103.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
97.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
96.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
95.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
94.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
94.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
94.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
92.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
91.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
91.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
91.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
90.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
90.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
89.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
88.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
88.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
88.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
87.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
87.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
86.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
86.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
85.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
85.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
85.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
84.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
84.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
84.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
84.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
83.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
83.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
83.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
83.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
82.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
82.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
82.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
82.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
82.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
82.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
82.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
81.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
80.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
79.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
79.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
79.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
78.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
78.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
78.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
77.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
76.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
76.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
75.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
75.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
74.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
74.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
74.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
73.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
73.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
73.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
72.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
72.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
72.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
71.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
71.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
70.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
70.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
69.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
69.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
69.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
69.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
69.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
68.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
68.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
68.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
68.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
68.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
68.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
67.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
67.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
67.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
66.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
66.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
66.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
66.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
66.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
66.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
65.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
65.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
65.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
64.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
64.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
63.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
63.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
63.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
62.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
62.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
62.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
62.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
61.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
61.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
61.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
60.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
60.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
60.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
60.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
60.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
60.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
60.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
60.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
59.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
59.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
59.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
59.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
58.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
58.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
58.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
58.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
58.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
58.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
57.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
57.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
57.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
57.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
57.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
56.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
56.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
56.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
55.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
55.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
55.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
55.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
55.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
55.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
55.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
55.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
54.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
54.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
54.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
53.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
53.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
53.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
53.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
53.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
53.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
53.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
52.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
52.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
52.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
52.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
51.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
51.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
51.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
50.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
50.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
50.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
50.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
49.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
49.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
49.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
49.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
49.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
48.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
48.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
48.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
48.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
48.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
48.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
48.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
48.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
47.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
47.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
47.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
47.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
47.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
47.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
46.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
46.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
46.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
46.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
45.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
45.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
45.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
44.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
44.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
44.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
43.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
43.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
43.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
43.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
42.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
42.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
42.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
42.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
41.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
40.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
40.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
40.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
40.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
39.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
39.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
39.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
39.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
38.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
38.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
38.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
38.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
38.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
37.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
36.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
36.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
36.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
35.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
35.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
34.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
34.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
34.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
34.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
33.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
33.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
32.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
31.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
31.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
31.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
31.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
30.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
30.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
29.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
28.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
27.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
27.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
27.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
27.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
26.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
24.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
24.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
24.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
22.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
21.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
20.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
20.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
19.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
17.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
17.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
14.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
14.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
13.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
12.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
11.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
9.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
9.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
8.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
6.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
5.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
4.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
4.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
4.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
3.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
3.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
3.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
3.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
1.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078800003
Tumor
0.7
CPT0014450004
Tumor
0.6
CPT0024670003
Tumor
0.6
CPT0078510003
Tumor
0.5
CPT0077110003
Tumor
0.5
CPT0012770003
Normal
0.4
CPT0007320003
Tumor
0.4
CPT0012570003
Normal
0.4
CPT0018250001
Normal
0.4
CPT0024680001
Normal
0.4
CPT0023360001
Normal
0.4
CPT0021240003
Tumor
0.4
CPT0001230001
Normal
0.4
CPT0082010001
Normal
0.4
CPT0092740003
Normal
0.4
CPT0025060001
Normal
0.4
CPT0088920001
Normal
0.4
CPT0006730001
Normal
0.3
CPT0010170001
Normal
0.3
CPT0017850003
Tumor
0.3
CPT0019130003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0066430001
Normal
0.3
CPT0014130001
Normal
0.3
CPT0079430001
Normal
0.3
CPT0012090003
Normal
0.3
CPT0007470001
Normal
0.3
CPT0025610001
Normal
0.3
CPT0006950001
Normal
0.3
CPT0089480003
Normal
0.3
CPT0076350001
Normal
0.3
CPT0009080003
Normal
0.3
CPT0065450001
Normal
0.3
CPT0002270011
Tumor
0.3
CPT0001350001
Normal
0.3
CPT0079000001
Normal
0.3
CPT0075560003
Tumor
0.3
CPT0081620001
Normal
0.3
CPT0092310003
Normal
0.3
CPT0092800003
Normal
0.3
CPT0069000003
Tumor
0.3
CPT0078670001
Normal
0.3
CPT0086890003
Normal
0.3
CPT0012670003
Tumor
0.2
CPT0063640001
Normal
0.2
CPT0001180009
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0000660001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0025230003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0078940001
Normal
0.2
CPT0065810003
Tumor
0.2
CPT0087050003
Normal
0.2
CPT0023710001
Normal
0.2
CPT0011240003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0001540009
Tumor
0.2
CPT0069010001
Normal
0.2
CPT0086830003
Normal
0.2
CPT0007870001
Normal
0.2
CPT0001550001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0079300001
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0012290003
Normal
0.2
CPT0077140001
Normal
0.2
CPT0020130001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0069190001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0088640003
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0064400001
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0088500001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0079480003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0064370003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0088550004
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0011410003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0025350003
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0065750003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0076330003
Tumor
-0.2
CPT0078660003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0063630003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0077490003
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0086030003
Tumor
-0.2
CPT0065430003
Tumor
-0.2
CPT0012180003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0079180003
Tumor
-0.2
CPT0081880003
Tumor
-0.3
CPT0020120003
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0079380003
Tumor
-0.3
CPT0065690003
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0092730003
Tumor
-0.3
CPT0088760003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0071150004
Tumor
-0.3
CPT0077310003
Tumor
-0.4
CPT0023350003
Tumor
-0.4
CPT0079510001
Normal
-0.4
CPT0014370004
Tumor
-0.4
CPT0085670003
Tumor
-0.4
CPT0086820003
Tumor
-0.4
CPT0089460004
Tumor
-0.4
CPT0025880003
Tumor
-0.5
CPT0000780007
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0001260009
Tumor
-0.5
CPT0087040003
Tumor
-0.5
CPT0002350011
Tumor
-0.6
CPT0017410003
Tumor
-0.7
CPT0001340003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
