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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPAT4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
59.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
54.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
48.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
44.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
38.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
38.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
37.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
36.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
35.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
35.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
34.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
34.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
33.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
33.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
32.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
31.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
30.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
28.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
28.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
26.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
25.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
25.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
24.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
24.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
24.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
23.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
22.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
22.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
22.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
22.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
21.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
20.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
20.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
19.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
19.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
19.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
18.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
18.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
16.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
16.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
16.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
16.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
15.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
15.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
14.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
13.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
12.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
12.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
12.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
12.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
11.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
11.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
10.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
7.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
7.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
7.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
7.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPAT4 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
140.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
91.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
81.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
62.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
54.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
50.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
50.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
46.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
44.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
43.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
41.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
39.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
38.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
37.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
36.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
35.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
35.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
34.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
33.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
33.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
33.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
33.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
33.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
32.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
32.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
32.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
32.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
32.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
31.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
30.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
30.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
30.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
30.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
30.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
30.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
29.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
29.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
29.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
29.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
29.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
28.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
28.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
27.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
27.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
27.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
27.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
27.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
27.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
26.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
26.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
26.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
26.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
26.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
26.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
26.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
25.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
25.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
25.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
25.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
25.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
25.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
25.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
25.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
25.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
25.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
24.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
24.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
24.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
24.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
24.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
24.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
24.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
23.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
23.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
23.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
23.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
23.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
23.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
23.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
23.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
23.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
23.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
22.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
22.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
22.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
22.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
22.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
21.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
21.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
21.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
21.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
21.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
21.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
21.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
21.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
21.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
21.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
21.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
21.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
21.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
21.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
21.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
21.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
21.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
20.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
20.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
20.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
20.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
20.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
20.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
20.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
20.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
20.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
20.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
20.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
20.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
20.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
20.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
20.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
20.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
20.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
19.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
19.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
19.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
19.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
19.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
19.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
19.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
19.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
19.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
19.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
19.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
19.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
19.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
19.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
19.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
19.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
19.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
19.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
19.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
19.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
19.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
18.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
18.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
18.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
18.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
18.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
18.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
18.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
18.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
18.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
18.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
18.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
18.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
18.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
18.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
18.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
18.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
18.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
18.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
18.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
18.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
18.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
18.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
18.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
18.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
18.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
17.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
17.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
17.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
17.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
17.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
17.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
17.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
17.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
17.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
17.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
17.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
17.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
17.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
17.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
17.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
17.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
17.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
16.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
16.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
16.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
16.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
16.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
16.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
16.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
16.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
16.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
16.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
16.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
16.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
16.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
16.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
16.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
16.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
16.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
16.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
16.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
16.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
16.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
16.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
16.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
15.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
15.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
15.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
15.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
15.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
15.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
15.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
15.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
15.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
15.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
15.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
15.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
15.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
15.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
15.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
15.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
15.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
15.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
15.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
15.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
15.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
15.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
15.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
15.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
15.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
14.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
14.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
14.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
14.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
14.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
14.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
14.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
14.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
14.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
14.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
14.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
14.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
14.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
14.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
14.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
14.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
13.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
13.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
13.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
13.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
13.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
13.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
13.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
13.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
13.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
13.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
13.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
13.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
13.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
12.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
12.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
12.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
12.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
12.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
12.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
12.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
12.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
12.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
12.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
12.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
12.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
12.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
12.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
12.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
12.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
12.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
12.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
12.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
12.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
12.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
12.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
12.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
12.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
12.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
12.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
12.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
11.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
11.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
11.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
11.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
11.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
11.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
11.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
11.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
11.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
11.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
11.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
10.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
10.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
10.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
10.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
10.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
10.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
10.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
10.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
10.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
10.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
10.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
10.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
9.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
9.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
9.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
9.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
9.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
9.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
9.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
9.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
9.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
9.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
9.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
9.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
9.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
9.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
9.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
9.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
9.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
9.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
9.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
8.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
8.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
8.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
8.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
8.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
8.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
8.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
8.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
8.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
8.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
8.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
8.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
8.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
8.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
8.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
8.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
8.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
8.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
7.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
7.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
7.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
7.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
7.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
7.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
7.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
7.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
7.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
7.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
7.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
7.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
7.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
6.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
6.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
6.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
6.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
6.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
6.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
6.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
5.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
5.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
5.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
5.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
5.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
5.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
4.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
4.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
4.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
2.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
1.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPAT4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
67.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
43.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
43.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
40.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
40.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
39.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
39.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
38.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
38.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
37.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
35.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
35.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
34.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
34.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
33.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
33.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
33.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
32.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
32.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
31.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
31.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
31.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
31.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
30.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
29.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
28.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
28.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
28.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
28.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
28.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
28.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
28.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
28.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
28.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
27.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
27.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
26.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
26.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
25.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
25.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
25.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
24.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
24.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
24.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
24.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
24.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
24.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
23.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
23.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
23.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
23.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
22.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
21.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
20.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
20.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
19.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
19.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
19.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
18.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
18.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
18.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
18.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
16.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
16.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
16.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
16.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
16.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
16.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
15.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
15.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
15.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
15.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
15.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
15.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
14.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
14.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
14.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
12.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
11.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
11.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
11.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
10.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
10.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
9.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
9.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
8.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
8.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
6.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPAT4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
111.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
111.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
90.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
80.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
59.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
57.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
53.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
51.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
48.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
42.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
42.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
41.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
41.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
40.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
39.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
39.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
38.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
38.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
38.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
37.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
37.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
36.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
36.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
36.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
35.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
35.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
35.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
35.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
34.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
33.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
33.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
32.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
32.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
32.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
30.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
30.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
30.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
30.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
30.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
30.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
30.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
29.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
29.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
28.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
28.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
28.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
28.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
28.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
28.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
27.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
27.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
27.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
27.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
27.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
27.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
26.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
26.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
26.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
26.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
25.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
25.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
25.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
25.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
24.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
24.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
24.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
24.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
24.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
24.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
23.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
23.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
23.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
23.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
23.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
22.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
22.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
22.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
21.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
21.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
21.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
21.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
21.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
21.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
21.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
21.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
21.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
21.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
21.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
21.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
21.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
21.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
21.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
20.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
20.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
20.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
20.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
20.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
20.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
20.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
20.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
20.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
20.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
20.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
20.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
20.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
20.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
20.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
19.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
19.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
19.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
19.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
19.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
19.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
19.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
19.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
19.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
19.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
18.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
18.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
18.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
18.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
18.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
18.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
18.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
18.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
18.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
18.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
17.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
17.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
17.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
17.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
17.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
17.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
17.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
17.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
17.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
17.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
17.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
17.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
17.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
17.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
17.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
17.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
17.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
16.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
16.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
16.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
16.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
16.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
16.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
16.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
16.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
16.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
16.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
16.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
16.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
16.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
16.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
16.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
16.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
16.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
16.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
16.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
16.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
16.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
16.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
16.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
15.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
15.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
15.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
15.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
15.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
15.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
15.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
15.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
15.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
15.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
15.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
15.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
15.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
15.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
15.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
15.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
15.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
15.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
15.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
14.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
14.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
14.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
14.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
14.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
14.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
14.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
14.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
14.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
14.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
14.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
14.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
14.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
14.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
13.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
13.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
13.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
13.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
13.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
13.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
13.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
13.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
13.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
13.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
13.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
13.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
13.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
13.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
12.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
12.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
12.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
12.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
12.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
12.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
12.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
12.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
12.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
12.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
11.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
11.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
11.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
11.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
11.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
11.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
10.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
10.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
10.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
10.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
10.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
10.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
9.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
8.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
7.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
7.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
7.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
6.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
2.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002270011
Tumor
1.0
CPT0078800003
Tumor
0.8
CPT0092310003
Normal
0.8
CPT0001350001
Normal
0.7
CPT0012280003
Tumor
0.7
CPT0092740003
Normal
0.5
CPT0088640003
Normal
0.5
CPT0089480003
Normal
0.5
CPT0078670001
Normal
0.5
CPT0079180003
Tumor
0.5
CPT0086830003
Normal
0.5
CPT0023360001
Normal
0.4
CPT0001190001
Normal
0.4
CPT0078660003
Tumor
0.4
CPT0026420001
Normal
0.4
CPT0020130001
Normal
0.4
CPT0078940001
Normal
0.4
CPT0086970003
Normal
0.4
CPT0010170001
Normal
0.4
CPT0077140001
Normal
0.4
CPT0076350001
Normal
0.4
CPT0092800003
Normal
0.4
CPT0087050003
Normal
0.4
CPT0088710001
Normal
0.4
CPT0063640001
Normal
0.4
CPT0000660001
Normal
0.4
CPT0086890003
Normal
0.3
CPT0078840001
Normal
0.3
CPT0006730001
Normal
0.3
CPT0088920001
Normal
0.3
CPT0082010001
Normal
0.3
CPT0012180003
Tumor
0.3
CPT0007470001
Normal
0.3
CPT0088480003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0001270001
Normal
0.3
CPT0001230001
Normal
0.3
CPT0088780001
Normal
0.2
CPT0079430001
Normal
0.2
CPT0023690003
Tumor
0.2
CPT0089040001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0025230003
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0064400001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0088970003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0001500009
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0015810003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0000790001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0069160003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0064370003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0017850003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0025880003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0092290003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0006900003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0069000003
Tumor
-0.2
CPT0081880003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0014450004
Tumor
-0.2
CPT0012900004
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0079230003
Tumor
-0.2
CPT0079000001
Normal
-0.2
CPT0009000003
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0000870016
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0025350003
Tumor
-0.2
CPT0012370003
Tumor
-0.2
CPT0012570003
Normal
-0.2
CPT0012670003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0077320001
Normal
-0.3
CPT0079300001
Normal
-0.3
CPT0089460004
Tumor
-0.3
CPT0079380003
Tumor
-0.3
CPT0019160001
Normal
-0.3
CPT0002350011
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0021240003
Tumor
-0.3
CPT0001220008
Tumor
-0.3
CPT0001550001
Normal
-0.3
CPT0000640003
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0092160003
Tumor
-0.3
CPT0077490003
Tumor
-0.4
CPT0009020003
Normal
-0.4
CPT0081600003
Tumor
-0.4
CPT0023350003
Tumor
-0.4
CPT0086820003
Tumor
-0.4
CPT0007320003
Tumor
-0.4
CPT0088760003
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0015730003
Tumor
-0.4
CPT0065870003
Tumor
-0.4
CPT0076330003
Tumor
-0.5
CPT0024670003
Tumor
-0.5
CPT0015910003
Tumor
-0.5
CPT0078990003
Tumor
-0.5
CPT0088550004
Tumor
-0.5
CPT0024680001
Normal
-0.5
CPT0020120003
Tumor
-0.5
CPT0026410003
Tumor
-0.5
CPT0025110003
Tumor
-0.5
CPT0012920003
Normal
-0.5
CPT0065930003
Tumor
-0.5
CPT0009080003
Normal
-0.5
CPT0065690003
Tumor
-0.5
CPT0075130003
Tumor
-0.5
CPT0078930003
Tumor
-0.5
CPT0063320003
Tumor
-0.5
CPT0012550003
Tumor
-0.6
CPT0088630003
Tumor
-0.6
CPT0086870003
Tumor
-0.6
CPT0014370004
Tumor
-0.6
CPT0001180009
Tumor
-0.7
CPT0006440003
Tumor
-0.7
CPT0007860003
Tumor
-0.7
CPT0012640003
Normal
-0.7
CPT0011240003
Tumor
-0.8
CPT0009060003
Tumor
-0.8
CPT0025050003
Tumor
-0.8
CPT0081990003
Tumor
-0.8
CPT0017410003
Tumor
-0.8
CPT0071150004
Tumor
-0.8
CPT0085670003
Tumor
-0.8
CPT0086950003
Tumor
-0.9
CPT0001340003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
