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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMED4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
133.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
409.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
303.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
283.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
259.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
249.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
214.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
198.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
198.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
198.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
194.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
189.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
186.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
176.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
174.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
171.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
170.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
160.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
159.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
155.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
151.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
143.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
141.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
140.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
140.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
139.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
139.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
137.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
137.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
132.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
131.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
129.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
128.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
127.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
126.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
123.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
119.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
117.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
116.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
111.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
111.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
109.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
103.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
101.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
99.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
95.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
84.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
83.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
81.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
78.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
74.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
74.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
72.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
72.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
71.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
69.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
63.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
63.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
62.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
60.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
56.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
52.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
49.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
46.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMED4 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
87.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
258.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
225.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
180.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
176.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
170.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
167.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
166.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
157.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
152.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
149.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
149.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
146.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
145.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
144.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
143.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
143.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
142.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
141.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
138.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
138.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
135.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
135.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
134.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
133.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
132.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
132.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
132.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
131.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
130.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
130.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
130.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
129.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
129.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
128.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
127.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
126.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
124.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
124.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
124.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
123.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
123.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
123.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
123.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
122.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
122.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
121.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
120.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
119.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
119.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
118.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
118.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
118.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
117.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
117.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
117.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
117.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
116.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
116.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
116.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
115.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
115.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
115.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
113.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
113.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
113.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
113.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
113.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
113.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
112.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
112.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
112.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
112.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
111.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
111.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
111.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
111.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
111.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
111.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
110.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
110.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
110.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
109.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
109.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
109.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
109.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
109.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
109.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
109.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
109.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
109.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
109.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
109.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
108.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
108.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
108.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
108.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
108.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
108.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
108.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
108.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
107.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
107.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
107.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
107.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
107.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
106.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
106.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
106.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
106.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
106.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
106.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
105.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
105.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
105.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
105.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
105.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
105.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
105.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
105.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
104.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
104.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
104.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
104.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
104.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
103.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
103.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
103.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
103.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
103.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
103.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
102.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
102.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
101.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
101.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
101.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
101.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
101.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
101.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
101.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
100.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
100.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
100.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
100.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
100.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
100.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
100.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
100.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
100.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
100.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
100.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
100.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
99.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
99.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
99.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
99.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
98.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
98.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
98.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
98.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
97.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
97.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
97.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
97.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
97.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
97.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
97.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
96.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
96.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
96.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
96.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
96.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
96.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
96.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
96.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
96.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
95.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
95.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
95.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
95.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
95.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
95.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
95.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
95.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
95.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
95.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
95.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
95.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
94.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
94.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
94.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
94.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
94.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
94.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
94.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
94.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
94.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
94.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
94.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
94.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
94.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
93.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
93.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
93.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
93.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
93.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
93.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
93.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
93.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
92.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
92.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
92.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
92.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
92.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
92.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
92.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
92.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
92.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
91.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
91.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
91.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
91.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
91.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
91.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
91.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
91.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
91.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
90.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
90.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
90.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
90.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
90.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
90.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
89.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
89.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
89.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
89.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
89.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
89.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
89.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
89.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
89.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
89.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
89.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
89.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
89.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
89.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
88.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
88.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
88.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
88.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
88.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
88.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
88.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
88.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
88.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
88.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
87.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
87.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
87.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
87.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
87.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
87.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
87.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
87.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
87.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
86.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
86.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
86.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
86.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
86.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
86.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
86.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
86.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
86.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
86.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
85.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
85.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
85.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
85.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
85.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
85.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
85.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
85.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
85.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
85.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
85.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
85.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
84.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
84.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
84.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
84.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
84.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
84.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
84.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
84.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
84.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
83.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
83.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
83.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
83.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
83.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
83.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
83.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
83.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
83.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
83.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
82.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
82.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
82.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
82.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
82.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
82.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
82.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
82.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
81.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
81.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
81.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
81.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
81.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
81.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
81.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
80.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
80.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
80.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
80.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
80.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
80.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
79.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
79.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
79.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
79.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
78.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
78.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
78.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
78.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
78.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
78.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
78.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
78.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
78.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
78.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
77.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
77.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
77.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
77.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
77.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
76.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
76.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
76.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
76.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
76.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
76.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
76.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
76.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
76.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
76.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
76.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
76.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
75.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
75.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
75.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
75.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
75.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
75.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
75.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
75.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
75.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
75.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
75.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
74.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
74.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
74.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
74.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
74.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
74.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
74.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
74.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
74.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
74.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
74.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
73.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
73.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
73.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
73.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
73.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
73.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
73.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
72.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
72.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
72.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
72.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
72.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
72.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
72.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
72.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
71.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
71.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
71.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
71.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
70.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
70.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
70.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
70.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
70.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
70.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
70.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
70.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
70.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
69.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
69.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
69.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
69.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
69.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
68.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
68.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
67.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
67.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
66.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
66.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
66.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
66.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
65.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
65.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
65.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
64.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
64.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
64.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
64.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
64.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
64.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
63.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
63.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
63.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
63.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
63.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
63.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
63.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
62.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
62.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
61.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
61.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
60.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
60.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
60.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
60.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
60.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
60.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
60.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
60.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
59.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
58.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
58.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
58.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
58.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
58.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
57.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
57.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
57.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
57.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
57.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
56.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
56.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
56.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
55.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
55.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
55.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
55.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
54.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
54.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
54.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
54.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
54.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
53.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
53.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
53.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
53.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
53.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
53.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
52.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
52.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
51.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
51.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
50.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
50.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
50.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
50.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
50.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
50.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
49.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
49.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
48.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
48.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
47.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
47.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
46.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
46.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
46.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
45.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
44.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
44.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
44.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
41.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
41.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
41.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
39.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
39.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
37.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
35.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
35.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
34.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
34.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
33.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
32.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
31.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
31.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
27.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
26.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
23.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
22.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
21.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMED4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
98.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
185.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
175.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
173.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
167.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
158.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
149.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
137.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
135.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
134.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
133.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
129.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
128.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
128.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
128.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
128.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
126.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
123.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
119.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
119.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
119.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
118.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
117.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
117.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
116.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
113.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
113.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
111.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
108.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
107.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
107.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
107.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
106.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
106.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
105.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
104.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
104.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
104.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
103.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
103.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
102.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
102.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
101.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
100.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
100.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
99.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
98.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
98.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
97.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
97.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
97.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
97.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
96.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
95.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
94.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
93.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
93.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
93.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
90.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
90.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
89.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
88.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
88.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
86.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
86.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
86.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
85.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
85.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
84.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
83.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
83.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
82.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
82.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
81.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
80.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
80.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
79.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
78.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
78.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
78.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
77.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
77.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
77.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
74.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
73.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
72.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
72.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
72.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
71.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
71.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
70.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
67.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
67.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
66.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
65.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
61.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
59.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
57.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
54.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMED4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
102.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
296.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
293.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
268.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
241.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
220.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
215.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
204.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
201.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
193.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
185.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
174.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
174.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
172.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
171.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
170.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
169.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
169.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
169.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
167.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
166.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
165.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
164.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
163.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
161.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
161.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
159.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
158.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
156.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
155.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
151.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
151.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
150.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
149.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
147.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
146.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
144.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
144.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
143.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
143.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
142.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
142.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
141.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
141.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
138.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
138.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
137.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
137.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
136.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
135.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
133.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
133.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
132.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
132.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
131.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
131.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
130.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
129.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
129.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
128.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
128.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
127.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
127.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
126.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
126.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
125.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
122.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
122.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
122.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
122.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
122.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
121.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
121.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
121.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
121.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
120.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
120.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
120.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
118.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
118.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
118.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
117.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
117.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
117.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
116.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
116.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
116.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
116.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
115.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
115.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
115.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
114.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
114.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
113.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
112.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
111.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
111.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
111.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
110.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
109.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
109.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
109.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
108.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
108.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
107.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
107.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
106.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
106.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
106.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
106.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
106.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
105.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
104.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
104.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
103.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
103.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
103.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
103.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
102.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
102.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
102.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
101.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
101.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
101.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
101.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
101.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
101.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
101.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
101.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
100.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
100.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
100.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
99.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
99.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
99.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
98.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
98.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
98.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
97.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
97.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
97.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
97.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
95.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
95.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
94.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
94.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
94.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
94.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
94.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
94.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
93.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
93.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
92.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
92.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
92.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
92.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
91.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
91.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
90.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
90.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
90.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
90.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
90.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
90.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
89.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
89.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
89.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
88.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
88.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
88.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
88.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
87.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
87.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
87.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
87.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
86.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
86.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
86.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
85.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
85.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
85.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
84.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
84.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
83.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
82.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
82.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
81.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
81.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
81.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
81.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
80.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
80.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
80.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
79.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
79.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
78.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
78.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
78.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
77.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
76.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
76.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
76.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
76.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
76.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
75.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
74.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
74.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
74.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
74.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
73.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
73.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
72.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
72.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
72.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
72.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
72.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
72.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
71.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
71.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
71.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
71.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
70.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
70.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
70.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
69.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
69.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
69.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
68.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
68.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
68.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
67.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
66.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
66.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
65.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
64.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
64.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
64.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
64.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
64.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
64.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
63.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
63.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
63.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
63.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
62.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
62.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
62.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
62.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
61.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
61.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
61.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
60.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
59.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
57.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
57.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
56.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
55.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
54.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
53.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
52.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
52.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
52.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
52.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
51.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
50.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
49.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
49.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
49.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
48.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
47.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
47.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
45.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
45.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
43.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
42.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
42.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
40.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
39.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
36.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
33.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
31.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
29.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
29.8
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0025110003
Tumor
1.1
CPT0002350011
Tumor
0.9
CPT0014450004
Tumor
0.8
CPT0086950003
Tumor
0.7
CPT0023350003
Tumor
0.7
CPT0015730003
Tumor
0.6
CPT0012180003
Tumor
0.6
CPT0078660003
Tumor
0.6
CPT0011410003
Tumor
0.6
CPT0063630003
Tumor
0.5
CPT0020120003
Tumor
0.5
CPT0079270003
Tumor
0.5
CPT0079180003
Tumor
0.5
CPT0025050003
Tumor
0.5
CPT0088690003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0024670003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0023690003
Tumor
0.4
CPT0075560003
Tumor
0.4
CPT0077110003
Tumor
0.4
CPT0078930003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0002270011
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0075130003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0065450001
Normal
0.2
CPT0012550003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0000640003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0000790001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0006630003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0026410003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0012080003
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0079410003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0001340003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0078530001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0001180009
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0012370003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0021240003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0012900004
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0078990003
Tumor
-0.1
CPT0025610001
Normal
-0.1
CPT0086890003
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0079230003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0078940001
Normal
-0.2
CPT0065930003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0077490003
Tumor
-0.2
CPT0069010001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0065870003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0088640003
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0012290003
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0071150004
Tumor
-0.3
CPT0012570003
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0010120001
Normal
-0.3
CPT0079300001
Normal
-0.3
CPT0075170001
Normal
-0.3
CPT0014370004
Tumor
-0.3
CPT0007870001
Normal
-0.3
CPT0077320001
Normal
-0.3
CPT0000780007
Tumor
-0.3
CPT0084560003
Tumor
-0.3
CPT0086830003
Normal
-0.3
CPT0001540009
Tumor
-0.4
CPT0002370001
Normal
-0.4
CPT0019990003
Tumor
-0.4
CPT0012090003
Normal
-0.4
CPT0009060003
Tumor
-0.4
CPT0000870016
Tumor
-0.4
CPT0079000001
Normal
-0.4
CPT0012770003
Normal
-0.4
CPT0012640003
Normal
-0.5
CPT0017450001
Normal
-0.5
CPT0088970003
Tumor
-0.5
CPT0009080003
Normal
-0.5
CPT0018250001
Normal
-0.6
CPT0009020003
Normal
-0.6
CPT0017410003
Tumor
-0.7
CPT0024680001
Normal
-0.7
CPT0011240003
Tumor
-0.8
CPT0012920003
Normal
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
