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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BABAM2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
70.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
67.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
59.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
58.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
47.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
43.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
42.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
41.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
35.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
35.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
33.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
32.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
31.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
30.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
29.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
29.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
28.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
27.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
25.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
25.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
24.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
23.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
22.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
22.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
22.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
22.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
22.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
21.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
21.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
21.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
21.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
21.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
20.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
20.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
20.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
19.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
19.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
19.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
16.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
15.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
15.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
15.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
14.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
13.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
13.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
13.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
13.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
12.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
12.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
12.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
11.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
11.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
9.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
8.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
8.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BABAM2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
181.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
123.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
122.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
117.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
114.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
109.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
99.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
94.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
94.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
92.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
90.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
89.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
87.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
85.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
84.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
83.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
81.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
80.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
78.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
77.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
77.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
77.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
77.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
76.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
75.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
75.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
75.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
74.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
72.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
71.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
71.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
71.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
71.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
70.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
70.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
68.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
68.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
68.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
68.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
68.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
67.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
67.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
67.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
66.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
66.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
66.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
66.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
65.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
65.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
65.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
64.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
64.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
64.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
64.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
64.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
64.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
63.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
63.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
63.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
62.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
62.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
62.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
62.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
62.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
62.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
62.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
61.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
61.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
61.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
61.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
61.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
61.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
61.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
61.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
60.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
60.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
60.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
60.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
60.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
60.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
60.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
60.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
60.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
59.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
59.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
59.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
59.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
59.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
59.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
59.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
59.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
59.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
59.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
59.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
58.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
58.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
58.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
58.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
58.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
58.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
58.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
57.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
57.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
57.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
57.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
57.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
57.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
57.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
57.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
57.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
56.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
56.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
56.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
56.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
56.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
56.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
56.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
56.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
56.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
56.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
55.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
55.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
55.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
55.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
55.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
55.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
55.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
55.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
55.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
55.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
55.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
55.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
55.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
55.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
55.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
54.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
54.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
54.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
54.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
54.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
54.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
54.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
54.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
54.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
54.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
54.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
54.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
54.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
54.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
54.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
54.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
54.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
53.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
53.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
53.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
53.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
53.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
53.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
53.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
53.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
53.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
53.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
53.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
53.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
53.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
52.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
52.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
52.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
52.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
52.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
52.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
52.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
52.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
52.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
52.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
52.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
52.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
52.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
51.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
51.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
51.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
51.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
51.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
51.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
50.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
50.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
50.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
50.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
50.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
50.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
50.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
50.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
50.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
50.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
49.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
49.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
49.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
49.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
49.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
49.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
49.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
49.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
49.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
49.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
49.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
49.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
49.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
49.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
48.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
48.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
48.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
48.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
48.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
48.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
48.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
47.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
47.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
47.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
47.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
47.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
47.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
47.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
47.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
47.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
47.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
47.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
47.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
47.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
47.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
47.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
47.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
47.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
46.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
46.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
46.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
46.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
46.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
46.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
46.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
46.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
46.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
46.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
46.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
46.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
46.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
46.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
45.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
45.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
45.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
45.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
45.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
45.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
45.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
45.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
45.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
45.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
45.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
45.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
45.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
45.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
45.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
44.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
44.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
44.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
44.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
44.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
44.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
44.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
44.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
44.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
44.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
44.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
44.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
44.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
44.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
44.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
44.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
44.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
44.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
44.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
44.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
43.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
43.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
43.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
43.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
43.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
43.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
43.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
43.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
43.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
43.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
43.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
42.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
42.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
42.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
42.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
42.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
42.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
42.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
42.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
42.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
42.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
42.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
42.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
42.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
42.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
42.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
42.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
42.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
42.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
42.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
42.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
42.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
41.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
41.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
41.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
41.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
41.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
41.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
41.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
41.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
41.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
40.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
40.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
40.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
40.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
40.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
40.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
40.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
40.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
40.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
40.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
40.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
40.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
40.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
40.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
40.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
40.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
40.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
40.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
39.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
39.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
39.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
39.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
39.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
39.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
39.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
39.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
39.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
39.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
39.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
39.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
38.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
38.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
38.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
38.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
38.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
38.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
38.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
38.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
38.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
38.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
37.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
37.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
37.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
37.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
37.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
37.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
37.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
37.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
37.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
37.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
37.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
37.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
36.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
36.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
36.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
36.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
36.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
36.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
36.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
36.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
36.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
36.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
36.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
36.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
36.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
36.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
36.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
36.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
36.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
36.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
36.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
35.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
35.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
35.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
35.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
35.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
35.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
35.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
35.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
35.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
35.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
35.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
35.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
34.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
34.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
34.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
34.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
34.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
34.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
34.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
33.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
33.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
33.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
33.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
33.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
33.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
33.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
33.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
33.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
33.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
33.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
33.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
32.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
32.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
32.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
32.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
32.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
32.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
31.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
31.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
31.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
31.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
31.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
30.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
30.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
30.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
30.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
30.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
30.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
30.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
30.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
30.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
30.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
30.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
30.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
30.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
29.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
29.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
29.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
29.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
29.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
29.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
29.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
29.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
29.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
28.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
28.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
28.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
28.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
28.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
27.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
26.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
26.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
26.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
26.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
26.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
26.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
26.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
25.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
25.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
25.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
25.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
25.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
25.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
25.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
25.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
25.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
25.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
24.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
24.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
24.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
24.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
24.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
23.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
23.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
23.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
23.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
23.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
22.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
22.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
22.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
22.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
22.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
22.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
22.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
22.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
22.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
22.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
20.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
20.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
19.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
19.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
19.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
18.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
17.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
17.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
15.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
14.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
14.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
14.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
14.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
12.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BABAM2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
132.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
90.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
87.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
86.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
79.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
75.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
75.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
74.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
67.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
66.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
60.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
59.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
58.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
58.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
58.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
57.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
57.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
56.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
55.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
54.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
54.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
54.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
54.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
53.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
53.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
52.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
52.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
52.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
52.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
52.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
51.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
51.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
51.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
51.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
50.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
50.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
50.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
50.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
50.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
49.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
49.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
49.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
48.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
48.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
47.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
47.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
47.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
47.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
47.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
47.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
46.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
46.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
46.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
45.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
45.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
44.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
44.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
44.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
44.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
44.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
43.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
43.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
43.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
43.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
43.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
43.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
43.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
42.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
42.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
42.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
42.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
42.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
41.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
41.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
40.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
40.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
39.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
38.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
38.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
38.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
38.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
37.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
37.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
36.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
35.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
35.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
35.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
34.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
34.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
34.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
33.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
33.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
32.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
32.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
29.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
28.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
28.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BABAM2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
54.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
214.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
182.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
152.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
110.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
109.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
107.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
103.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
100.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
99.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
99.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
99.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
92.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
92.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
92.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
91.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
89.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
86.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
84.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
82.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
82.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
82.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
81.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
81.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
81.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
80.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
79.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
78.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
78.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
78.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
78.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
77.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
77.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
77.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
76.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
76.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
75.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
75.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
74.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
74.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
73.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
73.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
73.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
73.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
73.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
73.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
72.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
72.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
72.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
71.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
70.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
70.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
70.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
70.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
69.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
69.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
69.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
69.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
69.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
69.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
69.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
68.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
68.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
68.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
68.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
68.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
68.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
67.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
67.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
67.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
67.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
67.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
66.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
66.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
66.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
66.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
65.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
65.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
65.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
65.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
64.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
64.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
64.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
64.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
64.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
64.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
63.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
63.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
63.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
63.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
62.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
62.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
62.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
62.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
62.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
62.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
62.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
62.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
61.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
61.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
61.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
60.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
60.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
60.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
60.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
60.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
59.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
59.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
59.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
59.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
59.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
59.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
58.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
58.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
58.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
58.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
57.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
57.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
57.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
56.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
56.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
56.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
56.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
55.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
55.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
55.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
55.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
54.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
54.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
54.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
54.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
54.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
54.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
54.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
53.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
53.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
51.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
51.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
51.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
51.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
51.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
51.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
51.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
51.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
51.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
51.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
51.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
50.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
50.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
50.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
50.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
50.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
50.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
49.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
49.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
49.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
49.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
49.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
49.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
48.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
48.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
48.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
48.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
48.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
48.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
47.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
47.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
47.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
47.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
47.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
47.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
47.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
47.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
46.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
46.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
46.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
46.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
46.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
46.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
45.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
45.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
45.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
45.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
44.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
44.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
44.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
44.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
43.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
43.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
43.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
43.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
43.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
43.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
42.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
42.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
42.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
42.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
42.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
42.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
41.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
41.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
41.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
41.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
41.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
41.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
40.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
40.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
40.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
40.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
40.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
40.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
40.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
40.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
39.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
39.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
39.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
39.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
38.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
38.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
37.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
37.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
37.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
37.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
37.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
37.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
37.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
36.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
36.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
36.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
36.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
36.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
36.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
36.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
35.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
35.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
34.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
34.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
34.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
34.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
34.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
34.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
33.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
33.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
33.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
33.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
32.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
31.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
31.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
31.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
31.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
31.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
31.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
31.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
30.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
30.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
29.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
28.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
28.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
28.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
27.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
27.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
27.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
26.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
26.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
26.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
26.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
26.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
25.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
24.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
23.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
23.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
23.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
23.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
21.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
21.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
20.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
19.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
18.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
17.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
16.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
13.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
12.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088970003
Tumor
0.5
CPT0021240003
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0025110003
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0002270011
Tumor
0.4
CPT0001500009
Tumor
0.4
CPT0011410003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0012770003
Normal
0.3
CPT0017850003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0065810003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0086360003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0012090003
Normal
0.2
CPT0092790003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0092740003
Normal
0.2
CPT0012570003
Normal
0.2
CPT0026420001
Normal
0.2
CPT0078990003
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0088710001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0077310003
Tumor
0.2
CPT0076350001
Normal
0.2
CPT0023690003
Tumor
0.2
CPT0025060001
Normal
0.2
CPT0012920003
Normal
0.2
CPT0001350001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0023350003
Tumor
0.2
CPT0078670001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0009000003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0006950001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0065450001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0069010001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0025050003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0088500001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0002350011
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0015730003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0009080003
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0001190001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0088640003
Normal
0.1
CPT0063640001
Normal
0.1
CPT0001220008
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0079510001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0078660003
Tumor
0.0
CPT0079180003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0001180009
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0092190003
Normal
0.0
CPT0000660001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0017410003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0088550004
Tumor
0.0
CPT0025880003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0014160003
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0001260009
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0001340003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0079380003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0088690003
Tumor
-0.2
CPT0081880003
Tumor
-0.3
CPT0065690003
Tumor
-0.3
CPT0025170003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0078510003
Tumor
-0.3
CPT0025290003
Tumor
-0.4
CPT0069160003
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
