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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NECAP2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
63.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
54.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
44.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
43.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
42.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
40.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
39.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
38.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
37.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
36.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
36.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
36.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
36.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
34.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
33.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
32.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
32.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
31.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
31.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
29.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
28.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
28.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
27.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
27.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
26.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
25.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
25.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
24.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
24.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
24.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
24.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
23.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
23.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
22.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
22.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
22.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
21.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
21.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
21.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
21.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
21.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
20.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
20.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
20.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
18.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
18.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
18.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
18.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
18.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
17.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
17.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
16.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
16.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
16.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
14.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
14.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
14.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
13.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
13.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
12.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
11.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
10.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NECAP2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
121.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
89.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
87.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
83.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
80.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
79.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
79.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
78.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
77.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
77.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
76.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
75.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
75.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
74.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
74.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
74.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
73.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
73.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
72.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
72.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
72.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
71.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
70.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
70.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
70.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
69.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
68.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
68.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
68.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
68.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
68.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
67.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
67.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
67.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
67.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
67.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
67.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
67.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
67.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
66.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
66.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
66.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
66.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
66.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
66.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
65.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
65.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
65.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
65.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
65.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
65.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
65.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
65.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
64.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
64.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
64.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
64.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
64.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
64.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
64.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
64.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
64.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
64.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
64.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
63.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
63.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
63.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
63.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
63.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
63.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
63.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
63.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
63.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
63.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
62.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
62.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
62.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
62.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
62.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
62.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
62.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
62.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
62.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
62.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
62.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
62.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
62.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
62.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
61.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
61.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
61.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
61.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
61.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
61.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
61.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
61.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
61.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
61.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
61.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
61.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
61.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
61.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
61.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
60.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
60.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
60.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
60.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
60.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
60.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
60.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
60.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
60.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
60.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
60.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
60.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
59.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
59.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
59.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
59.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
59.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
59.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
59.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
59.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
59.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
59.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
58.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
58.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
58.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
58.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
58.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
58.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
58.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
58.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
58.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
58.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
58.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
58.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
58.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
58.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
58.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
58.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
58.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
57.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
57.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
57.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
57.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
57.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
57.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
57.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
57.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
56.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
56.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
56.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
56.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
56.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
56.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
56.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
56.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
56.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
56.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
56.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
55.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
55.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
55.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
55.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
55.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
55.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
55.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
55.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
55.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
55.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
55.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
55.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
55.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
55.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
55.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
55.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
55.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
54.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
54.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
54.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
54.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
54.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
54.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
54.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
54.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
54.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
54.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
54.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
54.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
53.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
53.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
53.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
53.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
53.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
53.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
53.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
53.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
53.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
53.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
53.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
53.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
53.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
53.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
53.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
52.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
52.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
52.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
52.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
52.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
52.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
52.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
52.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
52.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
52.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
52.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
52.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
52.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
52.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
52.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
51.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
51.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
51.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
51.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
51.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
51.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
51.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
51.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
51.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
51.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
50.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
50.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
50.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
50.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
50.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
50.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
50.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
50.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
50.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
50.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
50.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
50.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
49.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
49.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
49.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
49.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
49.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
49.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
49.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
49.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
49.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
49.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
49.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
49.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
49.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
49.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
48.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
48.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
48.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
48.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
48.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
48.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
48.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
48.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
48.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
48.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
48.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
48.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
48.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
48.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
48.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
48.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
47.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
47.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
47.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
47.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
47.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
47.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
47.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
47.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
47.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
47.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
47.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
46.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
46.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
46.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
46.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
46.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
46.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
46.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
46.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
46.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
46.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
46.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
46.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
45.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
45.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
45.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
45.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
45.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
45.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
45.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
45.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
45.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
45.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
45.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
45.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
45.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
45.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
45.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
44.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
44.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
44.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
44.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
44.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
44.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
44.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
44.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
43.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
43.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
43.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
43.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
43.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
43.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
43.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
43.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
43.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
43.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
43.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
43.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
43.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
43.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
43.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
43.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
43.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
42.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
42.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
42.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
42.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
42.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
42.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
42.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
42.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
42.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
42.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
41.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
41.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
41.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
41.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
41.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
41.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
41.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
41.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
41.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
41.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
41.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
41.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
41.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
41.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
41.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
41.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
41.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
41.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
40.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
40.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
40.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
40.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
40.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
40.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
40.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
40.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
40.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
40.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
40.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
40.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
40.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
39.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
39.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
39.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
39.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
39.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
39.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
39.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
39.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
39.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
39.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
39.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
38.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
38.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
38.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
38.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
38.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
38.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
38.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
38.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
38.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
38.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
38.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
38.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
37.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
37.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
37.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
37.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
37.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
37.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
37.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
36.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
36.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
36.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
35.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
35.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
35.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
35.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
35.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
35.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
35.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
35.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
35.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
34.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
34.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
34.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
34.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
34.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
34.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
34.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
34.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
34.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
33.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
33.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
32.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
32.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
32.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
31.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
31.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
31.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
31.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
31.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
31.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
31.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
30.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
30.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
30.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
30.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
30.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
30.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
29.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
29.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
29.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
29.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
29.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
29.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
29.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
28.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
28.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
28.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
28.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
28.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
28.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
28.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
28.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
28.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
28.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
27.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
27.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
27.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
27.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
27.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
27.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
26.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
26.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
26.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
26.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
26.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
26.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
25.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
24.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
24.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
24.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
24.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
23.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
23.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
23.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
23.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
22.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
22.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
21.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
21.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
21.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
21.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
21.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
21.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
20.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
20.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
20.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
20.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
20.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
19.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
19.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
19.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
18.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
18.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
18.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
18.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
17.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
17.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
17.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
17.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
16.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
16.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
15.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
15.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
14.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
13.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
13.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
12.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
12.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
12.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
11.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NECAP2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
105.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
83.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
83.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
70.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
68.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
68.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
67.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
67.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
67.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
66.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
65.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
64.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
64.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
63.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
63.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
63.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
61.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
61.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
61.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
61.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
60.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
60.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
59.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
59.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
58.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
58.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
57.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
56.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
56.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
56.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
55.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
55.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
55.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
54.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
54.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
54.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
53.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
53.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
53.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
53.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
52.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
52.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
51.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
51.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
51.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
51.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
51.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
51.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
51.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
51.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
50.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
49.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
48.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
48.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
48.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
48.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
47.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
47.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
47.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
46.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
46.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
46.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
45.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
44.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
43.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
43.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
42.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
41.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
41.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
41.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
41.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
41.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
40.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
40.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
39.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
39.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
38.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
38.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
38.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
38.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
38.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
38.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
37.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
37.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
36.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
34.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
33.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
31.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
31.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
31.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
29.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
28.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
26.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
26.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
24.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
24.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
23.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
20.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
17.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NECAP2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
116.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
94.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
90.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
85.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
84.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
81.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
76.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
75.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
75.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
75.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
71.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
68.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
67.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
65.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
64.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
64.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
64.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
63.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
63.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
63.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
62.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
61.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
61.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
61.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
60.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
60.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
60.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
59.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
59.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
57.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
57.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
57.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
57.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
57.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
56.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
56.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
54.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
54.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
54.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
53.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
53.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
53.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
53.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
52.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
52.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
52.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
52.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
52.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
51.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
51.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
51.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
51.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
51.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
51.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
51.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
51.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
51.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
50.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
50.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
49.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
49.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
49.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
49.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
49.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
49.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
49.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
49.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
48.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
48.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
48.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
48.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
47.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
47.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
47.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
47.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
47.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
47.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
47.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
46.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
46.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
46.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
46.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
46.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
46.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
46.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
46.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
45.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
45.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
45.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
45.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
44.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
44.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
44.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
44.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
44.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
44.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
44.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
44.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
44.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
43.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
43.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
43.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
43.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
42.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
42.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
42.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
42.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
42.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
42.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
42.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
42.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
42.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
41.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
41.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
41.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
41.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
41.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
40.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
40.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
40.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
40.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
40.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
40.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
40.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
40.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
40.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
40.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
40.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
39.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
39.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
39.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
39.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
39.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
39.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
39.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
39.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
39.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
38.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
38.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
38.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
38.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
38.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
38.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
38.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
38.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
38.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
38.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
37.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
37.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
37.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
37.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
37.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
37.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
37.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
36.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
36.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
36.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
36.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
36.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
36.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
36.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
36.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
36.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
35.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
35.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
35.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
35.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
35.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
35.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
35.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
35.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
35.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
34.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
34.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
34.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
34.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
34.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
34.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
34.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
34.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
33.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
33.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
33.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
33.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
33.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
33.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
32.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
32.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
32.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
32.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
32.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
32.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
32.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
32.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
32.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
32.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
32.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
32.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
31.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
31.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
31.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
31.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
31.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
31.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
31.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
30.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
30.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
30.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
30.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
29.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
29.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
28.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
28.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
28.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
28.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
28.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
28.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
28.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
28.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
28.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
27.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
27.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
27.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
27.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
27.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
27.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
27.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
27.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
26.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
26.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
26.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
26.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
25.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
25.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
25.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
25.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
25.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
24.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
23.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
23.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
22.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
22.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
22.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
22.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
22.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
21.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
21.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
21.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
21.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
21.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
21.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
20.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
20.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
20.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
20.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
20.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
19.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
19.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
19.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
19.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
19.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
17.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
17.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
17.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
16.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
16.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
15.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
15.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
14.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
14.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
13.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
13.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
12.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
0.9
CPT0017410003
Tumor
0.7
CPT0092730003
Tumor
0.6
CPT0001340003
Tumor
0.6
CPT0078990003
Tumor
0.6
CPT0025050003
Tumor
0.5
CPT0011240003
Tumor
0.5
CPT0064370003
Tumor
0.5
CPT0079380003
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0069160003
Tumor
0.5
CPT0075560003
Tumor
0.5
CPT0015910003
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0012180003
Tumor
0.5
CPT0078510003
Tumor
0.4
CPT0014160003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0021240003
Tumor
0.4
CPT0092290003
Tumor
0.4
CPT0086360003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0007860003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0088760003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0010110003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0020120003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0026410003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0063630003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0023350003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0024670003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0079180003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0079410003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0009060003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0089460004
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0015730003
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0078660003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0009020003
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0011410003
Tumor
-0.2
CPT0079000001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0088970003
Tumor
-0.2
CPT0078670001
Normal
-0.2
CPT0014450004
Tumor
-0.2
CPT0092800003
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0089480003
Normal
-0.3
CPT0092740003
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0007870001
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0012770003
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0001230001
Normal
-0.4
CPT0006730001
Normal
-0.4
CPT0088640003
Normal
-0.4
CPT0078840001
Normal
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
